Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 2.5e-206 721.8 357 100.0
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.9e-137 493.0 361 67.0
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.0e-135 487.3 354 67.2
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.8e-132 476.5 350 68.0
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 6.9e-132 474.6 350 67.4
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.6e-131 472.6 352 67.6
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.6e-131 472.6 352 67.6
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.2e-130 469.5 357 65.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.9e-130 469.2 357 65.0
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 5.0e-130 468.4 357 65.3
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 5.0e-130 468.4 357 65.3
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 6.5e-130 468.0 356 64.9
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.5e-129 466.1 364 63.5
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 4.2e-129 465.3 357 65.3
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 9.3e-129 464.2 356 64.3
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.1e-128 463.0 354 65.0
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 6.1e-128 461.5 352 67.6
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.5e-126 456.1 359 65.2
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-125 453.4 359 64.9
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 2.8e-125 452.6 353 62.3
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 3.7e-125 452.2 354 63.6
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 4.8e-125 451.8 361 65.1
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.4e-124 450.3 353 65.2
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 4.1e-124 448.7 333 67.6
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.2e-123 447.2 333 67.3
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.2e-123 447.2 361 63.7
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.5e-123 446.8 350 65.1
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 2.0e-123 446.4 333 67.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 2.6e-123 446.0 333 67.3
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-123 446.0 355 64.2
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.3e-122 443.7 358 64.2
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 2.2e-122 443.0 358 64.0
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 3.8e-122 442.2 363 63.9
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.8e-122 442.2 352 63.6
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 5.0e-122 441.8 353 65.2
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.4e-121 440.3 364 64.8
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.5e-121 439.5 370 63.8
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 6.1e-120 434.9 354 64.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.4e-119 433.7 364 63.7
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.3e-119 433.0 365 62.7
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 3.0e-119 432.6 351 64.4
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 3.0e-119 432.6 357 62.7
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 6.7e-119 431.4 350 61.1
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.1e-118 430.6 356 62.1
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 1.5e-118 430.3 356 63.5
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 2.6e-118 429.5 377 61.3
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.6e-118 429.5 350 60.9
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 5.7e-118 428.3 356 62.6
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 9.7e-118 427.6 363 61.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 2.2e-117 426.4 350 62.6
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 2.8e-117 426.0 350 60.6
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.8e-117 426.0 356 61.8
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 2.8e-117 426.0 356 61.8
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.2e-117 424.5 347 64.0
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 8.2e-117 424.5 364 62.4
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.1e-116 424.1 363 63.1
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 3.1e-116 422.5 354 62.4
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.1e-116 422.5 350 60.3
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 4.1e-116 422.2 353 62.0
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 5.3e-116 421.8 354 60.2
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.6e-115 419.5 359 61.8
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 5.9e-115 418.3 354 60.5
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 7.7e-115 417.9 359 61.3
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 7.7e-115 417.9 354 60.5
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 7.7e-115 417.9 362 60.8
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 7.7e-115 417.9 362 60.8
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.7e-114 416.8 361 59.3
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 3.8e-114 415.6 358 61.2
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 6.5e-114 414.8 354 59.9
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 6.5e-114 414.8 375 59.2
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 4.2e-113 412.1 362 58.8
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 5.5e-113 411.8 361 59.8
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 7.2e-113 411.4 364 58.2
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-111 406.4 359 61.0
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.5e-110 403.7 371 56.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 2.0e-110 403.3 360 58.1
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 2.8e-109 399.4 359 59.3
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 8.2e-109 397.9 346 61.0
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.2e-107 394.0 374 57.2
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 4.5e-107 392.1 354 57.6
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-106 389.8 359 57.1
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 2.2e-106 389.8 354 57.3
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.8e-106 389.0 362 58.0
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 7.2e-105 384.8 360 56.7
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 3.6e-104 382.5 341 58.7
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 3.0e-103 379.4 354 57.3
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 4.4e-102 375.6 357 53.2
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 3.5e-99 365.9 339 56.9
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 2.2e-98 363.2 361 54.6
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 8.5e-98 361.3 367 53.7
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.2e-96 357.5 337 57.0
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 6.8e-95 351.7 331 56.8
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.8e-92 343.6 297 59.9
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 2.7e-91 339.7 365 54.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.8e-85 319.7 350 50.0
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.9e-85 318.9 265 61.5
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 9.2e-84 314.7 238 65.1
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.8e-80 303.1 353 50.1
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.2e-70 271.2 356 44.1
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.3e-69 267.7 233 60.1
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.1e-68 264.6 163 75.5
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 7.0e-68 261.9 221 59.7
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 3.9e-66 256.1 311 49.5
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 2.8e-64 250.0 233 57.5
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 2.9e-61 240.0 375 37.3
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 1.1e-55 221.5 253 49.4
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.2e-54 218.0 208 59.1
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-52 210.3 218 56.0
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.2e-52 208.4 218 55.0
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.5e-51 206.5 218 54.6
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.0e-50 204.9 142 71.8
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.2e-48 198.0 380 33.7
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.6e-48 197.6 213 52.6
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.4e-44 184.5 138 61.6
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.8e-43 178.7 118 71.2
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 3.3e-33 146.7 164 44.5
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.6e-30 135.6 218 44.0
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-23 114.4 64 84.4
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.9e-21 106.3 64 76.6
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-17 94.7 64 73.4
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.4e-15 87.4 119 44.5
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 3.8e-13 80.1 163 32.5
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 4.2e-12 76.6 52 67.3
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 6.1e-11 72.8 53 64.2
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 6.1e-11 72.8 53 64.2
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 6.1e-11 72.8 53 64.2
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 2.3e-10 70.9 51 62.7
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 3.0e-10 70.5 52 63.5
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 1.5e-06 58.2 49 55.1
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 1.5e-06 58.2 49 55.1
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 1.5e-06 58.2 49 55.1
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 1.5e-06 58.2 49 55.1


User provided reference genes

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