Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 4.4e-80 301.2 150 100.0
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 1.8e-65 252.7 149 81.2
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 6.8e-65 250.8 150 80.0
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 7.5e-64 247.3 150 78.7
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 1.7e-63 246.1 150 76.7
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 1.7e-63 246.1 150 79.3
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 4.9e-63 244.6 149 78.5
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 4.9e-63 244.6 151 80.8
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 6.4e-63 244.2 146 80.8
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 1.9e-62 242.7 149 79.2
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 1.9e-62 242.7 149 79.2
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 1.9e-62 242.7 149 79.2
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.9e-62 242.7 151 78.8
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.9e-62 242.7 149 78.5
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 2.4e-62 242.3 150 77.3
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 5.4e-62 241.1 150 78.7
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 9.2e-62 240.4 151 80.1
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.2e-61 240.0 149 77.2
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.2e-61 240.0 151 79.5
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 2.7e-61 238.8 150 77.3
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 2.7e-61 238.8 152 78.3
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.5e-61 238.4 151 79.5
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 3.5e-61 238.4 150 78.0
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 4.6e-61 238.0 149 79.2
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 6.0e-61 237.7 150 76.7
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 7.8e-61 237.3 146 81.5
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 1.0e-60 236.9 150 75.3
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 1.0e-60 236.9 149 75.2
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 1.0e-60 236.9 149 75.2
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.0e-60 236.9 151 78.8
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.3e-60 236.5 149 75.8
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 1.3e-60 236.5 149 78.5
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 1.3e-60 236.5 149 78.5
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.7e-60 236.1 148 79.1
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 2.3e-60 235.7 149 74.5
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 6.6e-60 234.2 149 74.5
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 6.6e-60 234.2 149 74.5
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 8.6e-60 233.8 150 77.3
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 1.9e-59 232.6 150 78.0
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 4.3e-59 231.5 150 76.0
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 5.6e-59 231.1 149 73.8
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 9.5e-59 230.3 151 77.5
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.6e-58 229.6 151 77.5
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 2.1e-58 229.2 149 76.5
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 4.7e-58 228.0 145 77.2
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 4.7e-58 228.0 149 75.8
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 4.7e-58 228.0 144 77.8
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 6.2e-58 227.6 150 76.7
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 6.2e-58 227.6 138 77.5
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 8.1e-58 227.3 144 77.8
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 8.1e-58 227.3 144 77.8
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 8.1e-58 227.3 150 75.3
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 1.1e-57 226.9 150 72.0
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 2.4e-57 225.7 144 77.1
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 6.8e-57 224.2 151 74.8
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 4.4e-56 221.5 150 71.3
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 4.4e-56 221.5 114 86.8
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 5.8e-56 221.1 144 75.0
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 9.9e-56 220.3 150 72.7
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 1.7e-55 219.5 175 66.9
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 2.2e-55 219.2 144 75.0
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 2.2e-55 219.2 144 75.7
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 3.8e-55 218.4 150 70.7
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 3.8e-55 218.4 145 75.2
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 4.9e-55 218.0 152 75.0
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 4.9e-55 218.0 150 72.7
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 6.4e-55 217.6 149 71.8
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 8.4e-55 217.2 145 75.9
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 3.2e-54 215.3 137 77.4
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 3.2e-54 215.3 149 72.5
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 3.2e-54 215.3 145 73.8
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 4.1e-54 214.9 138 75.4
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 4.1e-54 214.9 151 73.5
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 2.7e-53 212.2 137 75.9
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 2.7e-53 212.2 145 74.5
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 2.7e-53 212.2 150 72.0
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 3.5e-53 211.8 147 74.1
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 7.8e-53 210.7 146 71.9
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 1.3e-52 209.9 116 80.2
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.3e-52 209.9 152 71.7
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 1.7e-52 209.5 132 78.0
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 5.1e-52 208.0 151 70.9
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 6.6e-52 207.6 145 71.7
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 8.6e-52 207.2 151 70.2
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.5e-51 206.5 115 81.7
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 1.5e-51 206.5 131 75.6
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.5e-51 205.7 144 72.9
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 7.3e-51 204.1 116 81.0
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 9.6e-51 203.8 152 70.4
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.6e-50 203.0 152 68.4
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 2.8e-50 202.2 150 66.0
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 6.2e-50 201.1 150 66.0
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 8.1e-50 200.7 149 67.1
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 8.1e-50 200.7 152 69.7
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 2.4e-49 199.1 153 68.6
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 3.1e-49 198.7 113 80.5
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.1e-49 198.7 152 68.4
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 5.2e-49 198.0 152 68.4
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 6.9e-49 197.6 146 69.2
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 9.0e-49 197.2 149 65.1
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.6e-48 195.7 152 67.1
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.2e-47 192.6 140 71.4
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.3e-44 183.3 146 66.4
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 4.3e-43 178.3 115 77.4
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 1.3e-42 176.8 151 62.3
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 4.8e-42 174.9 145 64.1
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.4e-41 172.6 96 80.2
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 4.0e-41 171.8 139 61.2
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 6.9e-41 171.0 86 87.2
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.2e-40 170.2 84 89.3
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 4.5e-40 168.3 150 59.3
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 9.9e-40 167.2 118 72.9
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.3e-39 166.8 151 58.9
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 8.4e-39 164.1 121 70.2
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.4e-38 163.3 120 70.0
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 3.2e-38 162.2 149 54.4
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 2.1e-37 159.5 119 65.5
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 3.9e-36 155.2 90 76.7
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 2.6e-32 142.5 119 63.9
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 4.5e-32 141.7 119 66.4
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 5.8e-32 141.4 113 68.1
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.3e-31 140.2 119 64.7
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 2.9e-31 139.0 89 74.2
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 7.1e-30 134.4 149 53.0
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 9.3e-30 134.0 120 65.8
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 6.2e-26 121.3 91 68.1
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 2.4e-25 119.4 93 66.7
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.5e-19 100.1 92 52.2
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 5.3e-17 91.7 159 41.5
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 1.5e-16 90.1 91 46.2
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 5.5e-14 81.6 82 58.5
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 9.3e-14 80.9 74 63.5
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 1.8e-09 66.6 79 55.7
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 2.4e-09 66.2 79 54.4


User provided reference genes

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