Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 3.7e-180 634.8 328 100.0
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 2.6e-61 240.0 331 48.6
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 1.9e-59 233.8 318 48.4
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 7.2e-59 231.9 356 44.1
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.4e-57 227.6 355 46.2
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 8.5e-52 208.4 389 40.1
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 4.2e-51 206.1 303 44.6
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.2e-50 204.5 311 44.4
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 3.6e-50 203.0 336 42.3
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 3.3e-48 196.4 360 41.4
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 2.8e-47 193.4 432 34.5
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 7.0e-46 188.7 343 39.4
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 1.6e-45 187.6 359 39.3
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 7.7e-45 185.3 359 37.0
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 1.9e-43 180.6 318 39.6
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 4.2e-43 179.5 364 37.4
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 4.2e-43 179.5 326 39.9
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 7.2e-43 178.7 324 39.8
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 9.4e-43 178.3 222 48.6
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.6e-42 176.4 331 36.9
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 4.7e-42 176.0 232 46.1
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.0e-41 174.9 287 41.5
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 1.4e-41 174.5 331 40.5
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.3e-41 173.7 293 41.6
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 3.0e-41 173.3 325 38.8
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 2.0e-40 170.6 332 37.3
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 5.7e-40 169.1 241 45.2
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 7.5e-40 168.7 247 43.7
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.3e-39 167.9 274 41.2
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.7e-39 167.5 155 58.7
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.7e-39 167.5 374 36.4
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 3.7e-39 166.4 366 35.8
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 1.8e-38 164.1 333 35.4
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 3.1e-38 163.3 363 35.8
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 4.1e-38 162.9 266 42.9
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 7.0e-38 162.2 278 39.9
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.7e-37 160.2 259 41.7
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 1.5e-35 154.5 238 46.2
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 5.5e-35 152.5 340 35.9
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.4e-33 147.9 241 42.3
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 2.3e-33 147.1 306 37.9
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 4.0e-33 146.4 253 40.7
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 5.2e-33 146.0 252 41.3
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 2.0e-32 144.1 268 36.9
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 5.7e-32 142.5 280 36.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 2.8e-31 140.2 244 40.2
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 4.8e-31 139.4 321 34.6
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 1.1e-30 138.3 308 36.7
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 1.4e-30 137.9 244 38.9
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.1e-30 136.3 270 37.0
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 5.4e-30 136.0 320 33.8
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 7.0e-30 135.6 283 38.5
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 7.0e-30 135.6 284 33.5
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 9.1e-30 135.2 269 38.7
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 9.1e-30 135.2 337 33.2
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.2e-29 134.8 287 38.0
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 1.6e-29 134.4 320 35.0
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 2.7e-29 133.7 234 38.9
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.5e-29 133.3 271 36.2
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 3.5e-29 133.3 263 36.9
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 4.5e-29 132.9 267 36.0
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 1.0e-28 131.7 237 38.8
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 1.0e-28 131.7 314 33.8
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 6.5e-28 129.0 275 37.5
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 1.1e-27 128.3 284 39.1
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 1.5e-27 127.9 322 32.9
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 2.5e-27 127.1 354 29.9
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.2e-27 126.3 271 35.4
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 7.2e-27 125.6 264 34.5
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 4.0e-25 119.8 261 36.0
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 5.2e-25 119.4 245 36.3
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 1.5e-24 117.9 235 35.7
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 3.4e-24 116.7 267 33.0
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 7.5e-24 115.5 284 32.4
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 4.9e-23 112.8 284 34.5
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 3.1e-22 110.2 101 55.4
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 4.1e-22 109.8 250 34.8
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 9.2e-22 108.6 240 35.0
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 2.0e-21 107.5 241 36.5
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 2.7e-21 107.1 348 28.4
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 4.5e-21 106.3 226 36.3
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 5.9e-21 105.9 263 33.5
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.1e-19 101.7 277 32.1
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 5.6e-19 99.4 307 28.7
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 9.5e-19 98.6 266 33.8
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 2.8e-18 97.1 261 33.0
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 6.1e-18 95.9 267 34.1
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 7.5e-16 89.0 249 32.1
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 1.1e-14 85.1 187 35.8
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 2.4e-14 84.0 295 27.1
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 2.4e-14 84.0 252 29.0
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 2.4e-14 84.0 253 31.2
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 2.7e-13 80.5 256 29.7
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 2.7e-13 80.5 253 28.5
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 5.9e-13 79.3 78 52.6
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 1.1e-11 75.1 234 29.9
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 1.5e-11 74.7 238 29.8
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 7.3e-11 72.4 259 29.0
Mapoly0097s0057 Marchantia polymorpha HOM05D022173 ORTHO05D008520 9.5e-11 72.0 246 28.5
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 1.6e-10 71.2 156 33.3
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 2.1e-10 70.9 260 27.7
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.1e-10 70.9 345 27.5
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 8.0e-10 68.9 228 29.8
A10p18500 Brassica napus HOM05D012474 ORTHO05D008520 3.1e-09 67.0 244 27.9
BraA10t43930Z Brassica rapa HOM05D012474 ORTHO05D008520 5.2e-09 66.2 244 27.9
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 3.4e-08 63.5 279 29.0
Actinidia24231 Actinidia chinensis HOM05D007535 ORTHO05D008520 7.5e-08 62.4 171 35.1
CANSAT78G2361 Cannabis sativa HOM05D000107 ORTHO05D000062 1.7e-07 61.2 48 62.5
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.7e-07 61.2 179 34.6
MD11G1169000 Malus domestica HOM05D007535 ORTHO05D008520 2.2e-07 60.8 141 34.0
PRCOL_00004573 Prasinoderma coloniale HOM05D007535 ORTHO05D008520 6.4e-07 59.3 137 29.9


User provided reference genes

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