Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc193.9 Carica papaya HOM05D000003 ORTHO05D000006 1.8e-50 202.2 99 100.0
Cpa.g.sc96.61 Carica papaya HOM05D035046 ORTHO05D000006 5.6e-23 110.9 96 55.2
Cpa.g.sc99.45 Carica papaya HOM05D000003 ORTHO05D000006 1.6e-22 109.4 96 52.1
Cpa.g.sc110.25 Carica papaya HOM05D000003 ORTHO05D000006 4.0e-21 104.8 96 51.0
Cpa.g.sc2373.1 Carica papaya HOM05D000003 ORTHO05D000006 2.2e-19 99.0 76 55.3
Cpa.g.sc137.25 Carica papaya HOM05D000003 ORTHO05D000006 2.9e-19 98.6 84 53.6
Cpa.g.sc20.18 Carica papaya HOM05D000003 ORTHO05D000006 3.7e-19 98.2 98 50.0
Cpa.g.sc7.167 Carica papaya HOM05D000003 ORTHO05D000006 1.2e-17 93.2 96 43.8
Cpa.g.c35233.1 Carica papaya HOM05D000003 ORTHO05D000006 2.0e-17 92.4 83 49.4
Cpa.g.sc42.135 Carica papaya HOM05D000003 ORTHO05D000006 4.6e-17 91.3 92 45.7
Cpa.g.sc59.43 Carica papaya HOM05D004599 ORTHO05D005564 8.6e-16 87.0 92 44.6
Cpa.g.sc29.11 Carica papaya HOM05D000003 ORTHO05D000006 7.3e-15 84.0 82 48.8
Cpa.g.sc74.30 Carica papaya HOM05D000003 ORTHO05D000006 7.3e-15 84.0 92 42.4
Cpa.g.sc807.1 Carica papaya HOM05D000003 ORTHO05D000006 1.6e-14 82.8 72 55.6
Cpa.g.sc88.65 Carica papaya HOM05D000003 ORTHO05D000006 1.6e-14 82.8 92 43.5
Cpa.g.sc58.30 Carica papaya HOM05D000003 ORTHO05D000006 4.7e-14 81.3 72 52.8
Cpa.g.sc44.94 Carica papaya HOM05D000003 ORTHO05D000004 8.1e-14 80.5 72 48.6
Cpa.g.sc3068.1 Carica papaya HOM05D000003 ORTHO05D000006 1.1e-13 80.1 96 44.8
Cpa.g.sc10.69 Carica papaya HOM05D000003 ORTHO05D000006 3.1e-13 78.6 96 41.7
Cpa.g.sc110.41 Carica papaya HOM05D000003 ORTHO05D000006 3.1e-13 78.6 88 45.5
Cpa.g.sc30.37 Carica papaya HOM05D000113 ORTHO05D028529 3.1e-13 78.6 61 52.5
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 4.0e-13 78.2 100 39.0
Oeu048217.1 Olea europaea HOM05D000003 ORTHO05D000006 4.4e-12 74.7 96 39.6
Cpa.g.sc637.1 Carica papaya HOM05D000003 ORTHO05D000006 1.3e-11 73.2 88 42.0
Cpa.g.sc54.53 Carica papaya HOM05D000003 ORTHO05D000006 1.7e-11 72.8 72 45.8
Cpa.g.sc127.29 Carica papaya HOM05D000003 ORTHO05D000006 2.9e-11 72.0 90 40.0
Cpa.g.sc846.1 Carica papaya HOM05D000003 ORTHO05D000006 6.4e-11 70.9 67 49.3
Cpa.g.sc60.63 Carica papaya HOM05D000003 ORTHO05D000006 1.1e-10 70.1 82 41.5
Oeu027603.1 Olea europaea HOM05D000003 ORTHO05D000006 1.1e-10 70.1 96 36.5
Cpa.g.sc59.10 Carica papaya HOM05D000003 ORTHO05D000006 3.2e-10 68.6 96 35.4
MBI19_g12139_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.2e-10 68.6 98 35.7
Cpa.g.c39304 Carica papaya HOM05D000003 ORTHO05D000006 5.4e-10 67.8 78 43.6
Cpa.g.sc2.153 Carica papaya HOM05D003986 ORTHO05D004916 7.1e-10 67.4 72 43.1
Hund17645 Selenicereus undatus HOM05D000003 ORTHO05D000006 7.1e-10 67.4 96 37.5
Hund17851 Selenicereus undatus HOM05D001165 ORTHO05D000006 7.1e-10 67.4 95 36.8
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.2e-09 66.6 92 34.8
QL03p043458 Quercus lobata HOM05D000003 ORTHO05D000006 1.6e-09 66.2 92 35.9
QL03p044469 Quercus lobata HOM05D001046 ORTHO05D005883 1.6e-09 66.2 75 41.3
Cpa.g.sc205.21 Carica papaya HOM05D000003 ORTHO05D000006 2.1e-09 65.9 63 50.8
Oeu037061.1 Olea europaea HOM05D000003 ORTHO05D000006 2.1e-09 65.9 96 33.3
QL11p030559 Quercus lobata HOM05D002857 ORTHO05D007919 2.1e-09 65.9 72 43.1
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-09 65.5 98 34.7
Cpa.g.sc111.31 Carica papaya HOM05D000003 ORTHO05D000006 2.7e-09 65.5 45 55.6
Cpa.g.sc73.49 Carica papaya HOM05D020105 ORTHO05D000006 2.7e-09 65.5 66 43.9
QL04p042086 Quercus lobata HOM05D000003 ORTHO05D000006 3.5e-09 65.1 96 34.4
Cpa.g.sc28.43 Carica papaya HOM05D000003 ORTHO05D000006 4.6e-09 64.7 71 40.8
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.6e-09 64.7 97 40.2
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-09 64.7 96 35.4
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 4.6e-09 64.7 92 35.9
CiPaw.03G000600 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.0e-09 64.3 97 36.1
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 6.0e-09 64.3 92 33.7
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 6.0e-09 64.3 92 33.7
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 6.0e-09 64.3 92 33.7
Aqoxy1G03403 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.8e-09 63.9 96 33.3
Atru.chr2.258 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-08 63.5 71 45.1
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 1.0e-08 63.5 96 35.4
Atru.chr1.3831 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-08 63.2 99 38.4
Atru.chr2.1150 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-08 63.2 72 41.7
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-08 63.2 96 32.3
Hund10805 Selenicereus undatus HOM05D001165 ORTHO05D000006 1.3e-08 63.2 88 37.5
Aqoxy2G02685 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-08 62.8 96 32.3
CiPaw.12G097200 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.3e-08 62.4 98 35.7
MBI10_g05856_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.3e-08 62.4 65 46.2
SEGI_18798 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.3e-08 62.4 78 37.2
Aqoxy1G02399 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-08 62.0 96 32.3
Cpa.g.sc1660.2 Carica papaya HOM05D000003 ORTHO05D000004 3.0e-08 62.0 71 40.8
QL07p015200 Quercus lobata HOM05D000003 ORTHO05D012891 3.0e-08 62.0 75 40.0
QL11p030734 Quercus lobata HOM05D000969 ORTHO05D000899 3.0e-08 62.0 69 40.6
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 3.0e-08 62.0 92 32.6
Cpa.g.sc7.185 Carica papaya HOM05D000003 ORTHO05D000006 3.9e-08 61.6 72 44.4
QL11p020834 Quercus lobata HOM05D000154 ORTHO05D000092 3.9e-08 61.6 98 38.8
Cpa.g.sc17.59 Carica papaya HOM05D000003 ORTHO05D000006 5.1e-08 61.2 76 39.5
PSO339G6285 Papaver somniferum HOM05D000003 ORTHO05D000006 5.1e-08 61.2 96 31.2
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-08 61.2 100 35.0
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 5.1e-08 61.2 92 33.7
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 6.6e-08 60.8 100 35.0
QL06p042301 Quercus lobata HOM05D003435 ORTHO05D004032 6.6e-08 60.8 98 34.7
Aqoxy7G02447 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.6e-08 60.5 96 32.3
Cpa.g.sc98.68 Carica papaya HOM05D018947 ORTHO05D000006 1.1e-07 60.1 61 37.7
CiPaw.08G057000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-07 60.1 88 33.0
QL07p031183 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-07 60.1 96 31.2
CSS0023828 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-07 59.7 90 33.3
CiPaw.09G047300 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.5e-07 59.7 96 32.3
PSO151G0232 Papaver somniferum HOM05D000003 ORTHO05D000006 1.5e-07 59.7 96 33.3
Hund30486 Selenicereus undatus HOM05D001165 ORTHO05D000006 1.5e-07 59.7 94 33.0
Atru.chr2.1228 Acer truncatum HOM05D000003 ORTHO05D000006 1.9e-07 59.3 96 37.5
QL01p046256 Quercus lobata HOM05D000003 ORTHO05D000006 1.9e-07 59.3 92 34.8
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-07 59.3 94 36.2
Cpa.g.sc57.75 Carica papaya HOM05D000003 ORTHO05D000006 2.5e-07 58.9 54 44.4
Atru.chr1.2676 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-07 58.5 72 40.3
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 3.3e-07 58.5 94 34.0
Atru.chr3.1819 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-07 58.2 76 38.2
Cpa.g.sc34.73 Carica papaya HOM05D000003 ORTHO05D000006 4.3e-07 58.2 52 46.2
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 4.3e-07 58.2 76 36.8
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 4.3e-07 58.2 96 32.3
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-07 58.2 100 34.0
SHI17498 Sapria himalayana HOM05D000003 ORTHO05D000006 4.3e-07 58.2 94 33.0
Aa31sc808G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-07 57.8 96 32.3
CSS0036634 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.6e-07 57.8 96 33.3
Cpa.g.sc25.7 Carica papaya HOM05D000003 ORTHO05D000006 5.6e-07 57.8 90 33.3
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-07 57.4 81 32.1
Cpa.g.sc0.3 Carica papaya HOM05D041352 ORTHO05D000006 7.3e-07 57.4 67 40.3
Cpa.g.sc91.68 Carica papaya HOM05D012693 ORTHO05D000006 7.3e-07 57.4 96 33.3
CiPaw.16G055100 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.3e-07 57.4 72 37.5
QL03p009188 Quercus lobata HOM05D000003 ORTHO05D000006 7.3e-07 57.4 96 32.3
SHI44171 Sapria himalayana HOM05D000024 ORTHO05D000006 7.3e-07 57.4 100 32.0
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 7.3e-07 57.4 92 32.6
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-07 57.0 96 31.2
Cpa.g.c31806.2 Carica papaya HOM05D008736 ORTHO05D010193 9.5e-07 57.0 67 43.3
SHI30688 Sapria himalayana HOM05D000024 ORTHO05D000006 9.5e-07 57.0 100 34.0
Hund04262 Selenicereus undatus HOM05D001165 ORTHO05D000006 9.5e-07 57.0 84 36.9
TAR493G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000006 9.5e-07 57.0 100 32.0
Atru.chr10.61 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-06 56.6 92 38.0
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-06 56.6 71 36.6
Aqoxy3G01536 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-06 56.6 92 29.3
CAN.G824.4 Capsicum annuum HOM05D001092 ORTHO05D000923 1.2e-06 56.6 73 37.0
Cpa.g.c40813 Carica papaya HOM05D000003 ORTHO05D000006 1.2e-06 56.6 56 50.0
Oeu044837.2 Olea europaea HOM05D001809 ORTHO05D001802 1.2e-06 56.6 54 44.4
QL05p036287 Quercus lobata HOM05D000003 ORTHO05D000006 1.2e-06 56.6 76 38.2
RcHm_v2.0_Chr4g0393411 Rosa chinensis HOM05D000003 ORTHO05D000004 1.2e-06 56.6 100 32.0
SHI46014 Sapria himalayana HOM05D000003 ORTHO05D000004 1.2e-06 56.6 102 34.3
SHI55174 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 56.6 102 34.3
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 96 32.3
Atru.chr13.2342 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 72 41.7
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 98 35.7
Cpa.g.sc21.31 Carica papaya HOM05D000003 ORTHO05D000006 1.6e-06 56.2 38 52.6
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 1.6e-06 56.2 94 36.2
QL08p022680 Quercus lobata HOM05D000458 ORTHO05D004796 1.6e-06 56.2 90 40.0
QL11p018266 Quercus lobata HOM05D002326 ORTHO05D000006 1.6e-06 56.2 75 38.7
SHI35878 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 56.2 102 34.3
SHI38168 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 56.2 100 32.0
SHI46765 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 56.2 101 33.7
SHI49304 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 56.2 102 34.3
Cpa.g.sc172.15 Carica papaya HOM05D039512 ORTHO05D000006 2.1e-06 55.8 71 32.4
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.1e-06 55.8 59 40.7
PSO541G0911 Papaver somniferum HOM05D000003 ORTHO05D000006 2.1e-06 55.8 90 28.9
SHI25434 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-06 55.8 97 33.0
SHI34262 Sapria himalayana HOM05D000003 ORTHO05D000006 2.1e-06 55.8 96 34.4
SHI39530 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-06 55.8 102 34.3
SHI54646 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-06 55.8 102 34.3
Hund10800 Selenicereus undatus HOM05D001165 ORTHO05D010360 2.1e-06 55.8 69 40.6
Hund23306 Selenicereus undatus HOM05D001165 ORTHO05D000006 2.1e-06 55.8 85 37.6
Aqoxy4G01286 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-06 55.5 94 29.8
Aqoxy6G01940 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-06 55.5 94 31.9
Oeu032082.1 Olea europaea HOM05D000003 ORTHO05D000006 2.8e-06 55.5 96 33.3
Aqoxy1G03337 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.6e-06 55.1 94 30.9
CSS0025174 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.6e-06 55.1 93 32.3
Duzib151G0750 Durio zibethinus HOM05D000003 ORTHO05D000006 3.6e-06 55.1 75 38.7
MBI10_g41731_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.6e-06 55.1 74 36.5
QL06p028459 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-06 55.1 96 33.3
SEGI_41066 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 3.6e-06 55.1 96 33.3
TWI74G1519 Tripterygium wilfordii HOM05D000003 ORTHO05D000006 3.6e-06 55.1 96 35.4
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-06 54.7 71 40.8
Atru.chr6.601 Acer truncatum HOM05D000003 ORTHO05D000006 4.7e-06 54.7 71 38.0
CSS0005822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-06 54.7 71 35.2
CSS0033850 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.7e-06 54.7 71 36.6
Lj1g0013828 Lotus japonicus HOM05D000003 ORTHO05D000004 4.7e-06 54.7 50 46.0
MBI16_g31479_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.7e-06 54.7 91 31.9
SHI25422 Sapria himalayana HOM05D000024 ORTHO05D000006 4.7e-06 54.7 102 33.3
SHI30232 Sapria himalayana HOM05D000003 ORTHO05D000004 4.7e-06 54.7 54 42.6
Atru.chr2.2565 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-06 54.3 96 30.2
Atru.chr2.2596 Acer truncatum HOM05D000003 ORTHO05D000006 6.2e-06 54.3 78 33.3
HanXRQChr07g0188391 Helianthus annuus HOM05D000003 ORTHO05D000004 6.2e-06 54.3 88 34.1
SHI50575 Sapria himalayana HOM05D000024 ORTHO05D000006 6.2e-06 54.3 54 40.7
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 8.1e-06 53.9 71 39.4
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 8.1e-06 53.9 96 35.4
Atru.chr5.3363 Acer truncatum HOM05D000003 ORTHO05D000006 8.1e-06 53.9 72 36.1
Aqoxy2G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.1e-06 53.9 96 30.2
CSS0020053 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.1e-06 53.9 76 34.2
QL02p076152 Quercus lobata HOM05D000003 ORTHO05D012891 8.1e-06 53.9 90 33.3
QL07p016620 Quercus lobata HOM05D000003 ORTHO05D000004 8.1e-06 53.9 102 31.4
SHI15785 Sapria himalayana HOM05D000024 ORTHO05D000006 8.1e-06 53.9 100 29.0
SHI50037 Sapria himalayana HOM05D000024 ORTHO05D000006 8.1e-06 53.9 101 33.7
PGSC0003DMG400015955 Solanum tuberosum HOM05D000003 ORTHO05D000006 8.1e-06 53.9 98 31.6
TAR536G0011 Trochodendron aralioides HOM05D000003 ORTHO05D000004 8.1e-06 53.9 93 30.1
TAR549G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 8.1e-06 53.9 72 30.6


User provided reference genes

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