Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc192.14 Carica papaya HOM05D007837 ORTHO05D009965 9.8e-26 119.4 62 100.0
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 9.2e-16 86.3 58 70.7
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.2e-15 85.9 61 65.6
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 1.6e-15 85.5 59 71.2
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 1.7e-14 82.0 58 69.0
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 2.3e-14 81.6 58 67.2
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 3.0e-14 81.3 58 63.8
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 3.9e-14 80.9 57 68.4
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 5.0e-14 80.5 58 67.2
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 6.6e-14 80.1 58 65.5
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 1.9e-13 78.6 60 61.7
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 3.3e-13 77.8 58 65.5
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 3.3e-13 77.8 58 65.5
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 5.6e-13 77.0 57 64.9
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 5.6e-13 77.0 58 65.5
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 9.5e-13 76.3 58 63.8
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 1.2e-12 75.9 61 62.3
TPR.G1949 Trifolium pratense HOM05D007837 ORTHO05D009965 1.2e-12 75.9 59 59.3
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.6e-12 75.5 53 62.3
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 1.6e-12 75.5 53 62.3
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 2.8e-12 74.7 59 59.3
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 3.6e-12 74.3 58 65.5
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 4.7e-12 73.9 53 62.3
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 8.1e-12 73.2 56 62.5
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 8.1e-12 73.2 58 62.1
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 1.1e-11 72.8 58 62.1
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 1.1e-11 72.8 58 60.3
Medtr4g035220 Medicago truncatula HOM05D007837 ORTHO05D009965 1.4e-11 72.4 59 54.2
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.4e-11 72.4 58 65.5
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 2.3e-11 71.6 58 62.1
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 2.3e-11 71.6 52 59.6
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 3.1e-11 71.2 58 56.9
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 4.0e-11 70.9 58 62.1
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 4.0e-11 70.9 60 56.7
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 5.2e-11 70.5 58 58.6
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 6.8e-11 70.1 58 60.3
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 1.2e-10 69.3 54 63.0
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 2.6e-10 68.2 57 56.1
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 3.4e-10 67.8 57 59.6
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 4.4e-10 67.4 60 56.7
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 7.5e-10 66.6 60 56.7
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.2e-09 65.1 56 53.6
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.2e-09 65.1 56 53.6
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 1.1e-08 62.8 51 62.7
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 4.1e-08 60.8 56 58.9
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 9.2e-08 59.7 57 56.1
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 1.2e-07 59.3 57 56.1
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 1.2e-07 59.3 54 57.4
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 1.2e-07 59.3 55 56.4
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 1.2e-07 59.3 57 54.4
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 1.2e-07 59.3 57 54.4
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 1.6e-07 58.9 53 54.7


User provided reference genes

Program Settings