Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 3.4e-40 167.9 88 100.0
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 3.7e-34 147.9 88 85.2
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 6.2e-34 147.1 88 87.5
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 1.8e-33 145.6 88 85.2
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 4.0e-33 144.4 88 85.2
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 4.0e-33 144.4 88 87.5
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 4.0e-33 144.4 88 87.5
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 5.3e-33 144.1 88 87.5
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 6.9e-33 143.7 88 83.0
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 9.0e-33 143.3 88 85.2
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.5e-32 142.5 88 83.0
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 2.0e-32 142.1 88 81.8
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 2.6e-32 141.7 88 84.1
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 3.4e-32 141.4 88 85.2
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 4.5e-32 141.0 88 81.8
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 4.5e-32 141.0 88 83.0
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 5.8e-32 140.6 88 83.0
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 9.9e-32 139.8 88 78.4
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 1.3e-31 139.4 88 80.7
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 1.3e-31 139.4 88 81.8
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.7e-31 139.0 88 80.7
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 3.8e-31 137.9 89 80.9
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 3.8e-31 137.9 89 80.9
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 4.9e-31 137.5 88 81.8
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 1.1e-30 136.3 88 81.8
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 1.1e-30 136.3 89 79.8
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 1.4e-30 136.0 88 80.7
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 1.4e-30 136.0 89 79.8
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 1.4e-30 136.0 89 79.8
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.2e-30 134.8 88 80.7
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.2e-30 134.8 88 80.7
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 4.2e-30 134.4 87 80.5
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 4.2e-30 134.4 89 79.8
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 7.1e-30 133.7 88 79.5
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 9.3e-30 133.3 88 78.4
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 1.6e-29 132.5 84 82.1
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 1.6e-29 132.5 88 77.3
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.1e-29 132.1 88 78.4
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.7e-29 131.7 88 77.3
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 3.5e-29 131.3 87 79.3
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 4.6e-29 131.0 88 80.7
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 7.9e-29 130.2 90 77.8
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 1.0e-28 129.8 88 76.1
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 1.0e-28 129.8 88 77.3
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 1.3e-28 129.4 82 81.7
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.8e-28 129.0 90 74.4
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 3.9e-28 127.9 88 73.9
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 3.9e-28 127.9 80 82.5
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 5.1e-28 127.5 90 73.3
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 5.1e-28 127.5 78 83.3
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 8.7e-28 126.7 80 78.8
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 8.7e-28 126.7 88 73.9
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 1.1e-27 126.3 88 78.4
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 1.5e-27 125.9 88 73.9
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 2.5e-27 125.2 80 77.5
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 4.3e-27 124.4 89 75.3
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 5.6e-27 124.0 88 71.6
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 5.6e-27 124.0 88 72.7
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 7.4e-27 123.6 81 77.8
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 7.4e-27 123.6 88 72.7
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 7.4e-27 123.6 88 73.9
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 9.6e-27 123.2 88 75.0
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 9.6e-27 123.2 81 80.2
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 2.1e-26 122.1 88 69.3
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 2.8e-26 121.7 89 75.3
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 3.7e-26 121.3 88 70.5
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 3.7e-26 121.3 88 72.7
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 4.8e-26 120.9 88 72.7
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 8.2e-26 120.2 88 75.0
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 8.2e-26 120.2 88 72.7
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 1.1e-25 119.8 88 73.9
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.4e-25 119.4 88 67.0
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.4e-25 119.4 88 67.0
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 1.8e-25 119.0 77 80.5
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 2.4e-25 118.6 78 79.5
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 2.4e-25 118.6 88 73.9
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 2.4e-25 118.6 88 71.6
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 2.4e-25 118.6 88 71.6
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 2.4e-25 118.6 88 71.6
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 4.0e-25 117.9 88 71.6
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 4.0e-25 117.9 88 70.5
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 6.9e-25 117.1 81 76.5
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 1.2e-24 116.3 88 70.5
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 2.6e-24 115.2 88 72.7
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.6e-24 115.2 72 83.3
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 3.4e-24 114.8 89 70.8
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 3.4e-24 114.8 89 70.8
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 3.4e-24 114.8 88 68.2
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 4.5e-24 114.4 89 69.7
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 7.6e-24 113.6 89 69.7
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 7.6e-24 113.6 88 71.6
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 1.7e-23 112.5 81 69.1
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 2.9e-23 111.7 88 69.3
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 3.8e-23 111.3 69 84.1
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 1.1e-22 109.8 77 75.3
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 1.2e-21 106.3 81 65.4
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 1.6e-21 105.9 82 63.4
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.1e-21 105.5 66 83.3
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 4.6e-21 104.4 76 67.1
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 4.6e-21 104.4 72 76.4
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 7.9e-21 103.6 74 70.3
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 1.8e-20 102.4 69 81.2
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.3e-18 96.3 86 57.0
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 1.6e-18 95.9 85 65.9
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 2.4e-17 92.0 63 73.0
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 9.0e-17 90.1 70 67.1
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 1.5e-16 89.4 66 74.2
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 1.3e-15 86.3 71 67.6
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 5.5e-14 80.9 72 56.9
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 2.0e-08 62.4 81 42.0
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 5.9e-08 60.8 41 70.7


User provided reference genes

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