Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc19.280 Carica papaya HOM05D005224 ORTHO05D006372 3.7e-44 181.0 84 100.0
Manes.01G218400 Manihot esculenta HOM05D005224 ORTHO05D006372 4.0e-38 161.0 83 86.7
Duzib211G0376 Durio zibethinus HOM05D005224 ORTHO05D006372 6.8e-38 160.2 81 90.1
Gohir.A12G130700 Gossypium hirsutum HOM05D005224 ORTHO05D006372 7.5e-37 156.8 81 87.7
Gohir.D12G134600 Gossypium hirsutum HOM05D005224 ORTHO05D006372 7.5e-37 156.8 81 87.7
Gorai.008G145500 Gossypium raimondii HOM05D005224 ORTHO05D006372 7.5e-37 156.8 81 87.7
Duzib133G0273 Durio zibethinus HOM05D005224 ORTHO05D006372 9.8e-37 156.4 77 92.2
Eucgr.K03475 Eucalyptus grandis HOM05D005224 ORTHO05D006372 9.8e-37 156.4 83 88.0
CANSAT25G2283 Cannabis sativa HOM05D005224 ORTHO05D006372 1.7e-36 155.6 83 86.7
CARHR143080 Cardamine hirsuta HOM05D005224 ORTHO05D006372 1.7e-36 155.6 84 83.3
Ciclev10033216m.g Citrus clementina HOM05D005224 ORTHO05D006372 1.7e-36 155.6 83 84.3
vmacro03691 Vaccinium macrocarpon HOM05D005224 ORTHO05D006372 1.7e-36 155.6 84 84.5
THA.LOC104817499 Tarenaya hassleriana HOM05D005224 ORTHO05D006372 2.2e-36 155.2 84 84.5
Cfa005919 Carpinus fangiana HOM05D005224 ORTHO05D006372 2.9e-36 154.8 83 85.5
Thhalv10001702m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 2.9e-36 154.8 84 83.3
Gohir.A08G042400 Gossypium hirsutum HOM05D005224 ORTHO05D006372 2.9e-36 154.8 81 87.7
Gohir.A08G075800 Gossypium hirsutum HOM05D005224 ORTHO05D006372 2.9e-36 154.8 81 86.4
Gohir.D08G052200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 2.9e-36 154.8 81 87.7
Gorai.004G052300 Gossypium raimondii HOM05D005224 ORTHO05D006372 2.9e-36 154.8 81 87.7
Gorai.004G089700 Gossypium raimondii HOM05D005224 ORTHO05D006372 2.9e-36 154.8 81 86.4
Manes.05G062300 Manihot esculenta HOM05D005224 ORTHO05D006372 2.9e-36 154.8 83 84.3
Sp4g29630 Schrenkiella parvula HOM05D005224 ORTHO05D006372 2.9e-36 154.8 84 83.3
AL4G47260 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 3.7e-36 154.5 84 83.3
AT2G47690 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 3.7e-36 154.5 84 83.3
Haze_04931 Corylus avellana HOM05D005224 ORTHO05D006372 3.7e-36 154.5 83 84.3
Thecc.01G299700 Theobroma cacao HOM05D005224 ORTHO05D006372 3.7e-36 154.5 77 90.9
TWI23G0618 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 3.7e-36 154.5 84 81.0
Lj1g0012977 Lotus japonicus HOM05D005224 ORTHO05D006372 4.9e-36 154.1 84 85.7
Carub.0004s3041 Capsella rubella HOM05D005224 ORTHO05D006372 8.3e-36 153.3 84 82.1
Gohir.D08G085200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 8.3e-36 153.3 81 85.2
Hma1.2p1_1185F.1_g264980 Hydrangea macrophylla HOM05D005224 ORTHO05D006372 8.3e-36 153.3 84 85.7
BcaC07g40762 Brassica carinata HOM05D005224 ORTHO05D006372 1.1e-35 152.9 84 82.1
BcaC07g42731 Brassica carinata HOM05D005224 ORTHO05D006372 1.1e-35 152.9 84 82.1
A09p54640 Brassica napus HOM05D005224 ORTHO05D006372 1.1e-35 152.9 84 82.1
C08p37540 Brassica napus HOM05D005224 ORTHO05D006372 1.1e-35 152.9 84 82.1
BraA09t40875Z Brassica rapa HOM05D005224 ORTHO05D006372 1.1e-35 152.9 84 82.1
CARHR173060 Cardamine hirsuta HOM05D005224 ORTHO05D006372 1.1e-35 152.9 84 82.1
Sp5g00730 Schrenkiella parvula HOM05D005224 ORTHO05D006372 1.1e-35 152.9 84 82.1
BcaB02g08753 Brassica carinata HOM05D005224 ORTHO05D006372 1.4e-35 152.5 84 82.1
BcaNung06420 Brassica carinata HOM05D005224 ORTHO05D006372 1.4e-35 152.5 84 82.1
PSO210G7006 Papaver somniferum HOM05D005224 ORTHO05D006372 1.4e-35 152.5 83 80.7
PSO210G2815 Papaver somniferum HOM05D005224 ORTHO05D006372 1.8e-35 152.1 77 88.3
Phvul.001G207200 Phaseolus vulgaris HOM05D005224 ORTHO05D006372 1.8e-35 152.1 83 85.5
Potri.014G129600 Populus trichocarpa HOM05D005224 ORTHO05D006372 1.8e-35 152.1 84 85.7
AL5G45570 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 82.1
A07p26090 Brassica napus HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 83.3
BraA05t19024Z Brassica rapa HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 82.1
CSS0034435 Camellia sinensis var. sinensis HOM05D005224 ORTHO05D006372 2.4e-35 151.8 78 85.9
Thhalv10006347m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 82.1
HanXRQChr17g0538761 Helianthus annuus HOM05D005224 ORTHO05D006372 2.4e-35 151.8 83 83.1
AT3G62790 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 3.2e-35 151.4 84 82.1
Carub.0005s2944 Capsella rubella HOM05D005224 ORTHO05D006372 3.2e-35 151.4 84 82.1
PSO170G2085 Papaver somniferum HOM05D005224 ORTHO05D006372 3.2e-35 151.4 83 79.5
Psat3g022120 Pisum sativum HOM05D005224 ORTHO05D006372 3.2e-35 151.4 83 85.5
Aa31LG1G29010 Aethionema arabicum HOM05D005224 ORTHO05D006372 4.1e-35 151.0 84 81.0
ECA246G3542 Erigeron canadensis HOM05D005224 ORTHO05D006372 4.1e-35 151.0 76 88.2
HanXRQChr06g0173941 Helianthus annuus HOM05D005224 ORTHO05D006372 4.1e-35 151.0 76 88.2
Lsat_1_v5_gn_3_24761 Lactuca sativa HOM05D005224 ORTHO05D006372 4.1e-35 151.0 85 81.2
PSO832G3231 Papaver somniferum HOM05D005224 ORTHO05D006372 4.1e-35 151.0 77 87.0
Potri.002G204800 Populus trichocarpa HOM05D005224 ORTHO05D006372 4.1e-35 151.0 77 89.6
BcaC02g12549 Brassica carinata HOM05D005224 ORTHO05D006372 5.4e-35 150.6 84 82.1
C04p00180 Brassica napus HOM05D005224 ORTHO05D006372 5.4e-35 150.6 84 82.1
BolC4t21665H Brassica oleracea HOM05D005224 ORTHO05D006372 5.4e-35 150.6 84 82.1
Dinv29760 Davidia involucrata HOM05D005224 ORTHO05D006372 5.4e-35 150.6 77 89.6
Dinv44366 Davidia involucrata HOM05D005224 ORTHO05D006372 5.4e-35 150.6 77 89.6
Medtr7g108810 Medicago truncatula HOM05D001413 ORTHO05D001385 5.4e-35 150.6 74 90.5
Hund11874 Selenicereus undatus HOM05D005224 ORTHO05D006372 5.4e-35 150.6 84 83.3
TPR.G9599 Trifolium pratense HOM05D005224 ORTHO05D006372 5.4e-35 150.6 74 90.5
HPP92_017223 Vanilla planifolia HOM05D005224 ORTHO05D006372 5.4e-35 150.6 84 84.5
Ah.02g128370 Amaranthus hybridus HOM05D005224 ORTHO05D006372 9.2e-35 149.8 84 81.0
Aqoxy2G02950 Aquilegia oxysepala HOM05D005224 ORTHO05D006372 9.2e-35 149.8 76 85.5
ClCG10G010880 Citrullus lanatus HOM05D005224 ORTHO05D006372 9.2e-35 149.8 76 86.8
Cc04_g11150 Coffea canephora HOM05D005224 ORTHO05D006372 9.2e-35 149.8 75 89.3
TAR365G0183 Trochodendron aralioides HOM05D005224 ORTHO05D006372 9.2e-35 149.8 75 88.0
A05p00270 Brassica napus HOM05D005224 ORTHO05D006372 1.2e-34 149.4 84 81.0
Glyma.03G214500 Glycine max HOM05D005224 ORTHO05D006372 1.2e-34 149.4 83 84.3
Lalb_Chr15g0078521 Lupinus albus HOM05D005224 ORTHO05D006372 1.2e-34 149.4 83 83.1
RcHm_v2.0_Chr6g0293941 Rosa chinensis HOM05D005224 ORTHO05D006372 1.2e-34 149.4 82 84.1
GSVIVG01035146001 Vitis vinifera HOM05D005224 ORTHO05D006372 1.6e-34 149.1 82 82.9
BcaB02g07318 Brassica carinata HOM05D005224 ORTHO05D006372 2.0e-34 148.7 82 82.9
FvH4_2g25680 Fragaria vesca HOM05D005224 ORTHO05D006372 2.0e-34 148.7 82 82.9
FAN15G2088 Fragaria x ananassa HOM05D005224 ORTHO05D006372 2.0e-34 148.7 82 82.9
FAN20G0551 Fragaria x ananassa HOM05D005224 ORTHO05D006372 2.0e-34 148.7 82 82.9
FAN27G2170 Fragaria x ananassa HOM05D005224 ORTHO05D006372 2.0e-34 148.7 82 82.9
MD03G1287600 Malus domestica HOM05D005224 ORTHO05D006372 2.0e-34 148.7 76 88.2
BolC6t38010H Brassica oleracea HOM05D005224 ORTHO05D006372 2.7e-34 148.3 84 81.0
Nn4g25791 Nelumbo nucifera HOM05D005224 ORTHO05D006372 2.7e-34 148.3 74 86.5
PGR042G0105 Punica granatum HOM05D005224 ORTHO05D006372 2.7e-34 148.3 71 94.4
Sed0018249 Sechium edule HOM05D005224 ORTHO05D006372 2.7e-34 148.3 76 85.5
Sed0019318 Sechium edule HOM05D005224 ORTHO05D006372 2.7e-34 148.3 76 85.5
TWI14G1007 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 2.7e-34 148.3 84 79.8
Actinidia24346 Actinidia chinensis HOM05D001413 ORTHO05D001385 3.5e-34 147.9 74 87.8
QL12p028550 Quercus lobata HOM05D005224 ORTHO05D006372 3.5e-34 147.9 83 79.5
CiPaw.07G108200 Carya illinoinensis HOM05D005224 ORTHO05D006372 4.6e-34 147.5 83 80.7
DCAR_027069 Daucus carota HOM05D005224 ORTHO05D006372 4.6e-34 147.5 73 90.4
Glyma.19G211200 Glycine max HOM05D005224 ORTHO05D006372 4.6e-34 147.5 83 83.1
Prupe.8G260800 Prunus persica HOM05D005224 ORTHO05D006372 4.6e-34 147.5 76 86.8
EL10Ac3g05917 Beta vulgaris HOM05D005224 ORTHO05D006372 5.9e-34 147.1 84 79.8
CsaV3_4G000760 Cucumis sativus L. HOM05D005224 ORTHO05D006372 5.9e-34 147.1 76 84.2
Lalb_Chr04g0259841 Lupinus albus HOM05D005224 ORTHO05D006372 5.9e-34 147.1 83 83.1
arahy.Tifrunner.gnm1.ann1.8KN71Z Arachis hypogaea HOM05D005224 ORTHO05D006372 7.8e-34 146.7 76 85.5
arahy.Tifrunner.gnm1.ann1.EEQ3S4 Arachis hypogaea HOM05D005224 ORTHO05D006372 7.8e-34 146.7 76 85.5
arahy.Tifrunner.gnm1.ann1.U5VDRT Arachis hypogaea HOM05D005224 ORTHO05D006372 7.8e-34 146.7 76 85.5
Migut.D00213 Erythranthe guttata HOM05D005224 ORTHO05D006372 7.8e-34 146.7 81 81.5
CDE09G0321 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 1.0e-33 146.4 83 78.3
ATR0796G245 Amborella trichopoda HOM05D005224 ORTHO05D006372 1.7e-33 145.6 82 79.3
C06p28410 Brassica napus HOM05D005224 ORTHO05D006372 1.7e-33 145.6 83 80.7
Migut.D02475 Erythranthe guttata HOM05D005224 ORTHO05D006372 1.7e-33 145.6 81 80.2
Actinidia32220 Actinidia chinensis HOM05D005224 ORTHO05D006372 2.3e-33 145.2 84 77.4
CDE02G3260 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 3.0e-33 144.8 83 77.1
MBI18_g06871_MAGBIO Magnolia biondii HOM05D005224 ORTHO05D006372 3.0e-33 144.8 71 90.1
MELO3C017960.2 Cucumis melo HOM05D005224 ORTHO05D006372 5.0e-33 144.1 76 82.9
unitig_0.g663 Utricularia gibba HOM05D005224 ORTHO05D006372 5.0e-33 144.1 75 84.0
Zm00001eb039670 Zea mays HOM05D005224 ORTHO05D006372 4.3e-32 141.0 74 82.4
COL.COLO4_23352 Corchorus olitorius HOM05D005224 ORTHO05D006372 1.2e-31 139.4 97 71.1
Os08g0556600 Oryza sativa ssp. japonica HOM05D005224 ORTHO05D006372 1.2e-31 139.4 74 82.4
Nitab4.5_0011375g0020 Nicotiana tabacum HOM05D005224 ORTHO05D006372 1.6e-31 139.0 69 87.0
Sc25g0004000 Simmondsia chinensis HOM05D005224 ORTHO05D006372 1.6e-31 139.0 97 68.0
TAR370G0003 Trochodendron aralioides HOM05D005224 ORTHO05D006372 1.8e-30 135.6 63 93.7
Peaxi162Scf00589g00224 Petunia axillaris HOM05D005224 ORTHO05D006372 2.3e-30 135.2 65 89.2
SHI19781 Sapria himalayana HOM05D005224 ORTHO05D006372 4.0e-30 134.4 73 80.8
ECA240G1836 Erigeron canadensis HOM05D002891 ORTHO05D003369 1.2e-29 132.9 76 80.3
Solyc11g005880.2 Solanum lycopersicum HOM05D005224 ORTHO05D006372 3.4e-29 131.3 62 90.3
Sopen11g001830 Solanum pennellii HOM05D005224 ORTHO05D006372 3.4e-29 131.3 62 90.3
SalBow3G4056 Salvia bowleyana HOM05D005224 ORTHO05D006372 5.8e-29 130.6 96 66.7
Nitab4.5_0000805g0100 Nicotiana tabacum HOM05D005224 ORTHO05D006372 9.8e-29 129.8 61 90.2
PGSC0003DMG400028681 Solanum tuberosum HOM05D005224 ORTHO05D006372 1.3e-28 129.4 61 90.2
CAN.G652.1 Capsicum annuum HOM05D005224 ORTHO05D006372 2.9e-28 128.3 60 90.0
BcaC08g45239 Brassica carinata HOM05D005224 ORTHO05D006372 2.0e-26 122.1 91 63.7
TAR633G1838 Trochodendron aralioides HOM05D005224 ORTHO05D006372 4.3e-24 114.4 63 81.0
BraA07t30257Z Brassica rapa HOM05D005224 ORTHO05D006372 3.6e-23 111.3 50 92.0
HanXRQChr08g0223921 Helianthus annuus HOM05D005224 ORTHO05D006372 3.6e-23 111.3 50 92.0
Oeu054123.1 Olea europaea HOM05D005224 ORTHO05D006372 3.6e-23 111.3 50 92.0
HanXRQChr09g0263651 Helianthus annuus HOM05D005224 ORTHO05D006372 6.8e-22 107.1 50 88.0
MD02G1095800 Malus domestica HOM05D005224 ORTHO05D006372 4.4e-21 104.4 49 87.8
CBR_g52287 Chara braunii HOM05D005224 ORTHO05D006372 3.7e-20 101.3 76 60.5
CiPaw.08G095500 Carya illinoinensis HOM05D005224 ORTHO05D006372 1.4e-19 99.4 59 78.0
Mapoly0155s0025 Marchantia polymorpha HOM05D005224 ORTHO05D006372 3.2e-19 98.2 84 58.3
Pp3c11_13470 Physcomitrium patens HOM05D005224 ORTHO05D006372 7.8e-18 93.6 64 60.9
Pp3c7_20680 Physcomitrium patens HOM05D005224 ORTHO05D006372 7.8e-18 93.6 64 60.9
AagrBONN_evm.TU.Sc2ySwM_344.1353 Anthoceros agrestis HOM05D005224 ORTHO05D006372 1.0e-17 93.2 73 58.9
MCO16G429 Micromonas commoda HOM05D005224 ORTHO05D006372 1.5e-13 79.3 74 47.3
arahy.Tifrunner.gnm1.ann1.YEW5FF Arachis hypogaea HOM05D005224 ORTHO05D006372 2.8e-07 58.5 29 82.8
AUR62015428 Chenopodium quinoa HOM05D005224 ORTHO05D006372 1.8e-06 55.8 23 91.3


User provided reference genes

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