Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1834.7 912 100.0
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1256.1 919 70.4
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1234.9 911 69.7
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1223.8 907 68.2
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1203.3 920 65.9
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1203.0 920 67.5
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1199.5 910 68.5
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1193.7 920 66.7
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1189.1 904 65.7
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1188.3 921 65.1
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1186.4 914 65.5
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1176.0 910 67.4
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1175.6 906 66.9
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1175.2 906 66.4
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1170.6 892 65.7
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1169.5 917 66.1
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1167.5 928 65.6
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1166.8 906 66.3
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1164.8 917 67.0
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1162.1 918 64.7
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1157.1 916 64.7
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1156.7 903 65.9
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1155.6 914 64.3
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1154.8 913 63.7
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1151.3 918 64.3
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1140.9 915 62.7
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1139.4 916 62.6
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1139.4 914 62.6
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1138.6 847 66.7
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1138.3 912 65.7
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1134.8 902 62.4
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1129.4 918 61.8
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1126.7 913 61.9
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1125.9 916 64.0
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1120.9 852 65.6
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1120.9 886 64.1
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1119.0 853 65.8
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1118.2 913 62.2
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1117.1 918 62.3
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1116.7 849 65.0
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1115.5 851 64.3
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1114.0 924 61.1
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1113.6 904 61.8
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1112.8 906 61.9
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1112.1 918 61.5
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1111.3 912 61.2
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1111.3 912 61.2
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1110.5 916 60.7
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1094.3 910 60.9
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1093.2 903 62.0
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1091.3 916 61.2
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1088.6 918 61.1
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1088.2 853 63.7
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1086.6 897 61.6
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1085.1 918 60.9
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1080.5 855 62.7
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1080.1 913 60.6
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1079.3 957 59.2
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1078.9 794 66.8
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1078.2 911 60.7
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 1.2e-311 1072.8 909 60.4
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 1.9e-311 1072.4 849 62.1
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 9.4e-311 1070.1 925 61.3
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 4.7e-310 1067.8 878 61.8
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 4.7e-310 1067.8 917 61.0
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 8.0e-310 1067.0 849 61.7
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 1.4e-309 1066.2 955 60.9
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 3.1e-309 1065.1 918 59.3
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 4.0e-309 1064.7 1007 56.3
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 2.7e-305 1052.0 850 61.3
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 2.3e-301 1038.9 851 61.1
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.5e-300 1036.2 862 61.4
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 2.2e-299 1032.3 875 60.8
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 4.1e-298 1028.1 830 62.7
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 4.1e-298 1028.1 846 61.9
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 7.1e-298 1027.3 907 59.2
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.6e-297 1026.2 727 69.5
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 1.3e-296 1023.1 848 62.3
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 3.9e-296 1021.5 849 60.4
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 2.8e-294 1015.4 858 60.5
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 8.1e-294 1013.8 924 58.2
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 1.3e-291 1006.5 852 59.2
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 7.1e-290 1000.7 858 59.7
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 4.4e-284 981.5 807 63.7
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.7e-280 969.5 772 62.7
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 5.1e-280 968.0 909 57.1
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 6.4e-275 951.0 673 68.1
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 2.4e-274 949.1 868 55.3
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 5.3e-269 931.4 743 63.5
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 1.2e-268 930.2 954 53.8
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.3e-267 926.8 835 55.2
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 2.5e-266 922.5 732 64.2
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 1.8e-264 916.4 817 60.0
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 1.5e-260 903.3 872 53.7
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.9e-250 869.8 745 62.3
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 4.2e-234 815.5 710 59.2
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 3.8e-227 792.3 875 46.9
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 2.5e-226 789.6 893 45.8
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 1.3e-219 767.3 874 46.1
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 2.3e-203 713.4 776 47.7
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 4.3e-186 656.0 782 47.7
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 4.0e-176 622.9 600 49.5
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.2e-175 621.3 539 60.3
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.5e-170 604.4 513 61.6
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 9.6e-146 521.9 814 38.7
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 5.0e-142 509.6 778 38.4
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 4.4e-130 469.9 619 46.7
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 6.7e-123 446.0 413 57.9
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.0e-122 444.5 325 67.1
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.5e-101 374.4 441 47.2
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.2e-98 365.5 327 58.7
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.4e-91 342.0 250 63.2
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.7e-81 308.5 221 64.7
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 5.4e-80 303.5 223 66.4
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 9.2e-80 302.8 202 65.8
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.7e-79 301.2 165 81.2
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 6.0e-79 300.1 156 85.3
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.9e-78 297.4 154 85.7
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 4.1e-72 277.3 400 38.0
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.5e-53 215.7 147 65.3
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.4e-48 199.1 144 57.6
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.2e-28 132.1 206 37.9
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.1e-24 119.8 174 43.7
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 1.4e-11 76.3 109 41.3
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.4e-11 75.5 53 75.5
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 2.6e-10 72.0 95 47.4
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 5.5e-08 64.3 177 29.9
Actinidia04126 Actinidia chinensis HOM05D005937 ORTHO05D019459 1.8e-06 59.3 73 50.7


User provided reference genes

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