Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 3.6e-120 434.9 213 100.0
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 3.5e-22 109.4 73 63.0
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.3e-21 107.5 73 64.4
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.3e-21 106.7 73 64.4
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.3e-21 106.7 73 64.4
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 6.6e-21 105.1 67 70.1
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 1.5e-20 104.0 73 61.6
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.5e-20 104.0 73 63.0
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.5e-20 104.0 73 61.6
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.9e-20 103.6 73 61.6
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 4.3e-20 102.4 73 57.5
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 4.3e-20 102.4 67 65.7
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 5.6e-20 102.1 73 58.9
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 5.6e-20 102.1 73 60.3
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 7.3e-20 101.7 73 64.4
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 1.2e-19 100.9 73 58.9
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.6e-19 100.5 66 62.1
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 2.1e-19 100.1 72 61.1
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 2.8e-19 99.8 73 61.6
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 3.6e-19 99.4 75 61.3
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 3.6e-19 99.4 73 57.5
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 4.7e-19 99.0 73 60.3
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 4.7e-19 99.0 73 56.2
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 4.7e-19 99.0 71 59.2
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 4.7e-19 99.0 71 59.2
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 4.7e-19 99.0 71 59.2
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 4.7e-19 99.0 71 59.2
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.7e-19 99.0 75 62.7
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 6.2e-19 98.6 75 61.3
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 8.0e-19 98.2 73 61.6
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.0e-18 97.8 73 57.5
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.0e-18 97.8 73 58.9
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 1.0e-18 97.8 69 60.9
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 1.0e-18 97.8 69 59.4
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.0e-18 97.8 72 61.1
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.4e-18 97.4 73 60.3
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.3e-18 96.7 75 60.0
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 2.3e-18 96.7 67 61.2
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 3.1e-18 96.3 75 56.0
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 3.1e-18 96.3 70 60.0
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 3.1e-18 96.3 73 60.3
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 4.0e-18 95.9 71 59.2
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 5.2e-18 95.5 73 54.8
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 5.2e-18 95.5 71 57.7
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 6.8e-18 95.1 70 58.6
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 6.8e-18 95.1 73 58.9
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 6.8e-18 95.1 73 58.9
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 8.9e-18 94.7 73 56.2
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 8.9e-18 94.7 66 60.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.0e-17 93.6 73 57.5
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.6e-17 93.2 72 56.9
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 2.6e-17 93.2 74 58.1
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 3.4e-17 92.8 71 59.2
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.4e-17 92.8 73 56.2
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 4.4e-17 92.4 69 56.5
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.4e-17 92.4 75 56.0
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 5.8e-17 92.0 74 56.8
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 5.8e-17 92.0 68 57.4
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 9.8e-17 91.3 71 52.1
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.7e-16 90.5 67 58.2
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.7e-16 90.5 73 56.2
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 1.7e-16 90.5 73 56.2
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 2.2e-16 90.1 74 55.4
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 2.2e-16 90.1 71 54.9
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 2.9e-16 89.7 69 58.0
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 3.7e-16 89.4 69 55.1
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.7e-16 89.4 60 60.0
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 3.7e-16 89.4 67 59.7
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.9e-16 89.0 69 53.6
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.9e-16 89.0 87 51.7
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 6.4e-16 88.6 73 54.8
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 6.4e-16 88.6 73 54.8
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 6.4e-16 88.6 73 56.2
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.4e-15 87.4 71 56.3
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.4e-15 86.7 73 54.8
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 3.2e-15 86.3 71 50.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 5.4e-15 85.5 95 44.2
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 5.4e-15 85.5 73 53.4
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 9.2e-15 84.7 75 53.3
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 9.2e-15 84.7 84 45.2
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.2e-14 84.3 74 55.4
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.0e-14 83.6 67 53.7
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.7e-14 83.2 104 40.4
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.7e-14 83.2 69 55.1
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 3.5e-14 82.8 69 50.7
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 6.0e-14 82.0 70 52.9
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 7.8e-14 81.6 71 49.3
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 7.8e-14 81.6 67 53.7
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 3.9e-13 79.3 74 51.4
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.1e-12 77.8 53 66.0
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.5e-12 76.6 61 54.1
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 2.5e-12 76.6 71 52.1
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 3.3e-12 76.3 59 49.2
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 3.6e-11 72.8 58 51.7
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.2e-11 72.0 55 60.0
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.1e-10 71.2 69 46.4
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 8.3e-08 61.6 40 75.0


User provided reference genes

Program Settings