Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 5.2e-134 481.1 249 100.0
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 4.0e-46 189.1 207 58.0
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.7e-44 183.7 207 57.0
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.2e-42 177.6 218 53.7
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.3e-41 174.1 219 54.3
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 6.7e-41 171.8 207 56.0
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 8.7e-41 171.4 220 55.5
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.5e-40 170.6 219 53.9
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 4.3e-40 169.1 220 52.7
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 3.7e-39 166.0 222 52.7
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 4.8e-39 165.6 225 48.4
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 5.3e-38 162.2 219 49.3
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 9.0e-38 161.4 214 51.9
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 1.3e-36 157.5 210 51.4
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 2.9e-36 156.4 205 50.7
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 6.5e-36 155.2 219 48.4
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 6.5e-36 155.2 206 49.5
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 1.4e-35 154.1 218 47.7
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.4e-35 154.1 222 48.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 3.2e-35 152.9 208 51.9
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 9.4e-35 151.4 234 50.4
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 1.2e-34 151.0 232 50.0
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 2.1e-34 150.2 221 49.8
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 2.1e-34 150.2 213 50.7
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.7e-34 149.8 228 46.5
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.4e-33 147.5 198 52.0
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.8e-33 147.1 225 47.1
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 2.3e-33 146.7 223 46.2
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 3.9e-33 146.0 210 51.4
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 5.1e-33 145.6 207 49.8
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 6.7e-33 145.2 232 48.3
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 6.7e-33 145.2 224 47.8
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.1e-32 144.4 231 48.1
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.5e-32 144.1 220 48.6
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.9e-32 143.7 210 50.5
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 3.3e-32 142.9 220 47.3
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 4.3e-32 142.5 215 51.2
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.7e-31 140.6 224 45.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.7e-31 140.6 217 47.9
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.7e-31 140.6 220 49.1
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 3.7e-31 139.4 213 50.2
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 8.2e-31 138.3 199 53.3
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 2.4e-30 136.7 268 41.0
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.3e-30 135.6 226 44.2
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 9.1e-30 134.8 202 46.5
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.2e-29 134.4 229 46.7
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 2.6e-29 133.3 229 46.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.5e-29 132.5 244 43.0
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 7.7e-29 131.7 218 42.7
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.7e-28 130.6 217 44.2
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.2e-28 130.2 222 44.1
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 3.8e-28 129.4 223 46.2
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 5.0e-28 129.0 217 43.8
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 8.5e-28 128.3 216 45.4
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.1e-27 127.9 205 46.3
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 2.5e-27 126.7 274 39.1
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 2.5e-27 126.7 224 44.2
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.4e-27 124.8 220 40.9
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 2.1e-26 123.6 276 39.1
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.7e-26 123.2 207 43.5
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 6.1e-26 122.1 234 42.7
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 6.1e-26 122.1 216 46.8
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.0e-25 121.3 203 47.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.4e-25 120.9 200 47.5
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.8e-25 120.6 218 44.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 2.3e-25 120.2 212 44.8
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 3.9e-25 119.4 221 43.0
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 5.1e-25 119.0 206 45.6
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 6.7e-25 118.6 220 38.6
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 2.0e-24 117.1 226 44.7
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.6e-24 116.7 204 43.6
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.4e-24 115.9 206 45.1
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.4e-24 115.9 206 45.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 7.4e-24 115.2 253 38.7
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.4e-24 115.2 192 45.8
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.7e-24 114.8 219 39.7
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 9.7e-24 114.8 218 39.0
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 2.2e-23 113.6 318 34.3
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.7e-23 112.8 200 44.0
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.7e-23 112.8 200 44.0
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.1e-22 111.3 205 42.4
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 7.0e-22 108.6 219 41.6
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 2.6e-21 106.7 217 38.2
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.5e-21 105.9 195 41.5
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 3.8e-20 102.8 234 39.7
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 5.0e-20 102.4 239 40.2
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.4e-19 100.9 226 39.4
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.2e-18 97.8 219 37.0
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 3.6e-18 96.3 84 61.9
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 4.7e-18 95.9 183 42.1
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 3.0e-17 93.2 211 37.0
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 3.9e-17 92.8 200 39.5
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.5e-16 90.9 103 53.4
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 1.5e-16 90.9 101 53.5
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 4.4e-16 89.4 101 52.5
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 4.4e-16 89.4 101 52.5
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.2e-15 87.0 186 40.9
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 2.8e-15 86.7 208 39.4
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.4e-14 84.3 62 66.1
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.0e-13 80.5 199 37.7
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 3.5e-13 79.7 197 38.1
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 1.7e-12 77.4 199 33.2
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 3.8e-12 76.3 116 47.4
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 3.2e-11 73.2 116 48.3
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.6e-10 70.9 198 36.9
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.4e-06 57.0 199 29.6


User provided reference genes

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