Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc187.29 Carica papaya HOM05D004589 ORTHO05D005848 1.2e-188 662.9 325 100.0
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 5.1e-158 561.2 306 89.5
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 1.9e-157 559.3 306 87.6
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 4.8e-156 554.7 306 88.9
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 1.4e-155 553.1 306 87.9
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 1.8e-155 552.7 306 85.9
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 2.4e-155 552.4 306 85.6
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 6.9e-155 550.8 314 86.0
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 9.0e-155 550.4 306 86.3
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 9.0e-155 550.4 306 87.3
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 1.5e-154 549.7 306 86.6
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 2.6e-154 548.9 306 85.9
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 2.6e-154 548.9 306 86.3
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 7.6e-154 547.4 306 85.0
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 2.9e-153 545.4 306 84.3
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.9e-153 545.4 306 84.3
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 1.1e-152 543.5 306 86.3
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 1.1e-152 543.5 306 85.9
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 1.9e-152 542.7 306 85.9
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 1.9e-152 542.7 306 85.9
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.9e-152 542.7 306 84.0
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 3.2e-152 542.0 306 84.6
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 3.2e-152 542.0 306 85.6
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 5.5e-152 541.2 306 85.9
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 1.2e-151 540.0 306 85.6
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 1.2e-151 540.0 306 85.3
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 1.2e-151 540.0 306 85.3
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 1.2e-151 540.0 306 85.3
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 1.6e-151 539.7 306 84.6
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 2.7e-151 538.9 306 85.0
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 2.7e-151 538.9 306 85.0
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 2.7e-151 538.9 306 85.0
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 4.6e-151 538.1 306 84.3
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 4.6e-151 538.1 306 86.3
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 1.3e-150 536.6 306 83.3
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 3.0e-150 535.4 306 84.0
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 6.7e-150 534.3 306 84.0
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 6.7e-150 534.3 306 85.3
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 1.1e-149 533.5 306 83.7
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 8.2e-148 527.3 306 83.0
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 1.1e-147 526.9 306 81.7
Gohir.D07G034300 Gossypium hirsutum HOM05D004589 ORTHO05D005848 1.1e-147 526.9 306 84.0
Manes.03G011700 Manihot esculenta HOM05D004589 ORTHO05D005848 1.1e-147 526.9 306 83.0
TAR383G0245 Trochodendron aralioides HOM05D004589 ORTHO05D005848 2.4e-147 525.8 306 82.4
Actinidia14103 Actinidia chinensis HOM05D004589 ORTHO05D005848 3.1e-147 525.4 306 82.7
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 3.1e-147 525.4 306 84.0
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 9.0e-147 523.9 306 82.0
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 1.5e-146 523.1 306 83.7
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 4.5e-146 521.5 306 82.4
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.0e-145 520.4 306 81.4
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 1.3e-145 520.0 306 80.7
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 1.3e-145 520.0 306 80.4
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 1.7e-145 519.6 306 80.4
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 2.2e-145 519.2 306 81.4
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 5.5e-144 514.6 306 81.7
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 5.5e-144 514.6 306 82.7
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 9.4e-144 513.8 306 81.4
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 1.6e-143 513.1 310 80.0
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 2.7e-143 512.3 306 81.4
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 4.6e-143 511.5 306 81.4
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 6.1e-143 511.1 306 81.0
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.8e-142 509.6 306 80.4
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 2.3e-142 509.2 309 79.3
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 2.3e-142 509.2 306 79.4
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 2.3e-142 509.2 306 79.4
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 6.7e-142 507.7 306 80.7
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 1.1e-141 506.9 306 80.7
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 1.1e-141 506.9 306 80.7
TPR.G38939 Trifolium pratense HOM05D004589 ORTHO05D005848 1.1e-141 506.9 306 80.7
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 2.5e-141 505.8 306 80.1
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 3.3e-141 505.4 306 78.8
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 4.3e-141 505.0 307 79.8
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 5.7e-141 504.6 306 78.1
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 2.8e-140 502.3 306 77.8
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 3.7e-140 501.9 306 79.1
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 4.8e-140 501.5 306 80.7
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 4.1e-139 498.4 306 78.4
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 3.4e-138 495.4 306 76.5
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 3.4e-138 495.4 306 77.1
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.0e-137 493.8 349 71.3
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.0e-137 493.8 349 71.3
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 1.3e-137 493.4 308 77.6
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 2.2e-137 492.7 306 76.5
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 8.5e-137 490.7 307 77.5
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 1.9e-136 489.6 306 75.8
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 6.1e-135 484.6 306 77.5
unitig_32.g11112 Utricularia gibba HOM05D004589 ORTHO05D005848 1.8e-134 483.0 308 72.1
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 2.0e-133 479.6 306 76.8
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.7e-129 466.5 321 72.6
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 2.2e-129 466.1 306 72.9
HPP92_020312 Vanilla planifolia HOM05D004589 ORTHO05D005848 3.2e-128 462.2 307 73.0
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 3.6e-127 458.8 306 73.5
SEGI_04045 Sequoiadendron giganteum HOM05D004589 ORTHO05D005848 3.6e-127 458.8 298 72.8
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 5.2e-126 454.9 306 71.2
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 1.7e-121 439.9 310 69.7
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 2.5e-120 436.0 307 67.8
Hma1.2p1_0167F.1_g073630 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 3.2e-120 435.6 292 75.7
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 1.5e-117 426.8 307 66.8
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 7.5e-117 424.5 418 56.7
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 4.1e-115 418.7 295 66.4
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 7.7e-106 387.9 295 62.7
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 1.7e-100 370.2 319 56.4
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 6.6e-97 358.2 297 58.9
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 2.5e-96 356.3 297 58.9
SMO361G0208 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 7.8e-82 308.1 295 52.2
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 3.0e-81 306.2 319 49.2
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 9.5e-80 301.2 299 49.8
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 3.2e-67 259.6 148 87.8
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 3.2e-67 259.6 148 87.8
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 1.2e-66 257.7 141 90.8
HPP92_024789 Vanilla planifolia HOM05D004589 ORTHO05D005848 3.1e-62 243.0 156 76.9
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 6.9e-62 241.9 166 70.5
MD08G1153900 Malus domestica HOM05D004589 ORTHO05D005848 2.3e-57 226.9 115 89.6
Zm00001eb426000 Zea mays HOM05D004589 ORTHO05D005848 1.7e-52 210.7 141 75.2
HPP92_024790 Vanilla planifolia HOM05D004589 ORTHO05D005848 6.2e-47 192.2 137 65.0
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 2.7e-42 176.8 100 87.0
Cre07.g316100 Chlamydomonas reinhardtii HOM05D004589 ORTHO05D005848 6.5e-36 155.6 304 31.2
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 3.2e-35 153.3 85 82.4
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 3.6e-34 149.8 85 80.0
SMO361G0808 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.5e-29 134.4 148 50.7
Sp3g28070 Schrenkiella parvula HOM05D004589 ORTHO05D005848 8.5e-20 102.1 62 77.4
RcHm_v2.0_Chr2g0096161 Rosa chinensis HOM05D004589 ORTHO05D005848 2.0e-13 80.9 45 77.8
arahy.Tifrunner.gnm1.ann1.E2IMN8 Arachis hypogaea HOM05D004589 ORTHO05D005848 1.0e-12 78.6 52 65.4
C02p04820 Brassica napus HOM05D004589 ORTHO05D023960 2.2e-12 77.4 74 64.9
BolC2t06439H Brassica oleracea HOM05D004589 ORTHO05D023960 2.2e-12 77.4 74 64.9
Sabra19G0134500 Salix brachista HOM05D001978 ORTHO05D000005 3.8e-12 76.6 70 58.6
Nn4g24965 Nelumbo nucifera HOM05D004589 ORTHO05D005848 5.0e-12 76.3 54 77.8
A02p00800 Brassica napus HOM05D004589 ORTHO05D023960 6.5e-12 75.9 60 70.0
Cc00_g21220 Coffea canephora HOM05D004589 ORTHO05D005848 3.6e-10 70.1 55 60.0
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 7.5e-08 62.4 39 71.8
BcaC03g13346 Brassica carinata HOM05D004589 ORTHO05D023960 4.1e-06 56.6 48 68.8


User provided reference genes

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