Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc187.28 Carica papaya HOM05D004589 ORTHO05D005848 2.5e-62 241.9 117 100.0
TAR383G0934 Trochodendron aralioides HOM05D004589 ORTHO05D005848 2.3e-52 208.8 117 84.6
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 8.8e-52 206.8 117 81.2
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 2.6e-51 205.3 115 85.2
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 5.7e-51 204.1 117 81.2
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.3e-50 203.0 117 80.3
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 2.2e-50 202.2 117 82.1
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 2.2e-50 202.2 117 81.2
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 2.2e-50 202.2 117 81.2
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 3.7e-50 201.4 117 81.2
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 3.7e-50 201.4 117 82.1
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 6.3e-50 200.7 117 80.3
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 1.1e-49 199.9 117 80.3
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 1.4e-49 199.5 117 78.6
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 1.4e-49 199.5 116 80.2
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 2.4e-49 198.7 117 79.5
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 2.4e-49 198.7 117 79.5
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 2.4e-49 198.7 117 79.5
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 4.1e-49 198.0 117 80.3
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 4.1e-49 198.0 114 80.7
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 5.3e-49 197.6 117 79.5
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 5.3e-49 197.6 116 82.8
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 7.0e-49 197.2 117 75.2
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 9.1e-49 196.8 117 79.5
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 1.6e-48 196.1 116 81.9
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 1.6e-48 196.1 117 80.3
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 1.6e-48 196.1 117 81.2
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 2.0e-48 195.7 117 78.6
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 2.0e-48 195.7 114 83.3
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 2.0e-48 195.7 117 79.5
Gohir.D07G034250 Gossypium hirsutum HOM05D004589 ORTHO05D005848 2.0e-48 195.7 117 78.6
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 2.7e-48 195.3 114 83.3
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 2.7e-48 195.3 114 83.3
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 2.7e-48 195.3 114 83.3
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 2.7e-48 195.3 117 79.5
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 3.5e-48 194.9 116 81.0
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 4.5e-48 194.5 117 77.8
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 5.9e-48 194.1 116 75.0
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 7.7e-48 193.7 117 76.1
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 7.7e-48 193.7 117 76.9
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 1.0e-47 193.4 117 77.8
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 1.0e-47 193.4 116 80.2
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 1.0e-47 193.4 114 82.5
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 1.0e-47 193.4 115 79.1
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 1.0e-47 193.4 114 82.5
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 1.3e-47 193.0 113 78.8
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 1.3e-47 193.0 117 78.6
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 2.2e-47 192.2 117 76.1
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 2.2e-47 192.2 117 76.1
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 2.9e-47 191.8 116 81.0
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.9e-47 191.8 117 76.9
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 2.9e-47 191.8 115 77.4
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 3.8e-47 191.4 117 76.1
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 3.8e-47 191.4 117 76.1
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 3.8e-47 191.4 117 76.1
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 3.8e-47 191.4 114 80.7
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 5.0e-47 191.0 117 74.4
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 5.0e-47 191.0 117 74.4
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 5.0e-47 191.0 117 74.4
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 5.0e-47 191.0 115 77.4
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 8.5e-47 190.3 117 76.1
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 8.5e-47 190.3 117 73.5
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 1.1e-46 189.9 116 72.4
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 1.1e-46 189.9 117 75.2
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.1e-46 189.9 115 76.5
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 1.5e-46 189.5 117 75.2
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 1.9e-46 189.1 117 76.9
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 1.9e-46 189.1 117 73.5
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 2.5e-46 188.7 117 74.4
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.5e-46 188.7 117 74.4
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 3.2e-46 188.3 114 76.3
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 5.5e-46 187.6 116 79.3
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 5.5e-46 187.6 117 73.5
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 5.5e-46 187.6 117 72.6
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 5.5e-46 187.6 117 73.5
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 9.4e-46 186.8 117 75.2
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.2e-45 186.4 117 73.5
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 1.6e-45 186.0 113 75.2
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 1.6e-45 186.0 115 75.7
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 1.6e-45 186.0 117 73.5
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 1.6e-45 186.0 117 72.6
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 2.1e-45 185.7 117 72.6
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 2.1e-45 185.7 117 72.6
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 4.7e-45 184.5 114 75.4
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 1.4e-44 183.0 117 71.8
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 4.0e-44 181.4 117 70.9
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 4.0e-44 181.4 117 69.2
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 6.8e-44 180.6 115 70.4
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 2.0e-43 179.1 111 71.2
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 2.0e-43 179.1 117 68.4
TPR.G38909 Trifolium pratense HOM05D004589 ORTHO05D005848 2.6e-43 178.7 117 68.4
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 3.4e-43 178.3 117 69.2
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 1.3e-42 176.4 117 68.4
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 3.7e-42 174.9 114 68.4
Medtr7g069440 Medicago truncatula HOM05D004589 ORTHO05D005848 4.8e-42 174.5 117 67.5
unitig_32.g11113 Utricularia gibba HOM05D004589 ORTHO05D005848 6.3e-42 174.1 117 70.1
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.1e-41 173.3 114 69.3
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 1.1e-41 173.3 117 64.1
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 2.0e-40 169.1 117 66.7
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 8.6e-39 163.7 117 65.0
arahy.Tifrunner.gnm1.ann1.6TA6W9 Arachis hypogaea HOM05D004589 ORTHO05D005848 1.8e-36 156.0 117 65.0
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 2.0e-35 152.5 95 75.8
HPP92_024788 Vanilla planifolia HOM05D004589 ORTHO05D005848 1.7e-34 149.4 117 57.3
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 3.3e-30 135.2 114 57.9
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 5.8e-27 124.4 123 52.0
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 8.3e-26 120.6 122 48.4
TWI34G0107 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 7.0e-25 117.5 115 57.4
SEGI_40067 Sequoiadendron giganteum HOM05D004589 ORTHO05D005848 7.3e-22 107.5 71 67.6
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 9.5e-22 107.1 119 47.1
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 1.5e-19 99.8 119 45.4
arahy.Tifrunner.gnm1.ann1.6PY749 Arachis hypogaea HOM05D004589 ORTHO05D005848 2.0e-19 99.4 115 47.8
Atru.chr7.2501 Acer truncatum HOM05D004589 ORTHO05D005848 7.5e-19 97.4 59 74.6
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.6e-16 89.7 112 42.0
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 5.1e-15 84.7 80 47.5
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 1.9e-14 82.8 44 86.4
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.4e-12 76.6 103 37.9
CSS0039966 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 3.4e-11 72.0 44 77.3


User provided reference genes

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