Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.8e-170 602.4 293 100.0
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 3.0e-149 531.9 290 87.9
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.7e-149 530.8 290 88.6
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 6.7e-149 530.8 290 88.6
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 1.1e-148 530.0 293 86.7
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 3.3e-148 528.5 290 87.2
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.3e-148 528.5 290 87.9
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 9.6e-148 526.9 290 87.9
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.1e-147 525.8 290 86.6
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 2.8e-147 525.4 290 87.2
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 3.7e-147 525.0 290 85.5
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 3.7e-147 525.0 290 86.9
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.8e-147 524.6 290 86.2
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.8e-147 524.6 290 86.6
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 4.8e-147 524.6 290 86.9
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 8.2e-147 523.9 290 86.9
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.1e-146 523.5 290 87.6
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.1e-146 523.5 290 87.6
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 1.1e-146 523.5 290 86.6
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.8e-146 522.7 290 87.2
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 2.4e-146 522.3 290 86.6
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.4e-146 522.3 290 85.9
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 4.0e-146 521.5 290 86.6
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 5.3e-146 521.2 289 86.9
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 6.9e-146 520.8 290 84.8
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.5e-145 519.6 290 85.2
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 3.4e-145 518.5 291 84.9
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 4.5e-145 518.1 290 86.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 7.6e-145 517.3 290 85.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 7.6e-145 517.3 290 84.8
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.0e-144 516.9 290 85.5
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.0e-144 516.9 290 85.2
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.3e-144 516.5 290 86.2
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.7e-144 516.2 290 84.8
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.8e-144 515.0 292 84.9
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.1e-143 513.5 290 84.1
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 1.4e-143 513.1 290 84.8
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 1.4e-143 513.1 290 85.2
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.5e-143 512.3 290 83.8
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 4.2e-143 511.5 290 84.5
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 5.5e-143 511.1 291 83.8
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 7.1e-143 510.8 290 82.8
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 2.1e-142 509.2 290 83.8
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 2.1e-142 509.2 290 82.8
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 2.7e-142 508.8 290 83.8
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 6.0e-142 507.7 287 84.0
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 6.0e-142 507.7 287 84.0
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 6.0e-142 507.7 290 83.8
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 7.9e-142 507.3 290 82.4
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 7.9e-142 507.3 291 82.8
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 1.3e-141 506.5 290 81.7
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 2.3e-141 505.8 290 81.7
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.0e-141 505.4 290 83.1
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 5.1e-141 504.6 280 84.6
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 5.1e-141 504.6 321 77.6
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 6.7e-141 504.2 290 81.0
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 6.7e-141 504.2 290 81.0
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 6.7e-141 504.2 290 81.0
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.1e-140 503.4 289 84.1
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.5e-140 503.1 290 80.7
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.5e-140 503.1 290 85.2
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 1.5e-140 503.1 290 81.4
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.9e-140 502.7 290 80.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.9e-140 502.7 290 83.1
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 4.3e-140 501.5 290 81.4
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 5.7e-140 501.1 290 82.8
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 5.7e-140 501.1 290 83.4
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 7.4e-140 500.7 290 82.4
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.3e-139 500.0 290 80.7
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.3e-139 500.0 290 81.7
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.2e-139 499.2 290 83.1
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.2e-139 499.2 290 82.4
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.8e-139 498.8 289 83.4
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 2.8e-139 498.8 290 81.4
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 2.8e-139 498.8 290 81.4
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 3.7e-139 498.4 290 80.3
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 6.3e-139 497.7 290 82.1
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 4.1e-138 495.0 290 80.0
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.2e-137 493.4 294 83.0
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 2.0e-137 492.7 291 79.4
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 3.4e-137 491.9 290 81.4
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.7e-136 489.6 290 79.3
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.7e-136 489.6 290 79.0
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.7e-136 489.6 287 81.9
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.9e-136 488.8 290 80.0
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 8.5e-136 487.3 289 79.9
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.4e-135 486.5 290 77.9
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.4e-135 486.5 290 77.9
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.4e-135 486.5 276 85.1
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 5.5e-135 484.6 271 86.7
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 7.2e-135 484.2 288 78.1
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 7.2e-135 484.2 288 78.1
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 7.2e-135 484.2 289 77.9
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 9.4e-135 483.8 290 80.0
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 9.4e-135 483.8 293 78.5
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 2.7e-134 482.3 287 78.0
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.6e-134 481.5 290 81.0
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.8e-133 479.6 287 79.1
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.8e-133 479.6 292 80.1
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 6.7e-133 477.6 272 84.9
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 2.2e-131 472.6 290 80.7
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.8e-131 472.2 272 83.8
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 5.3e-130 468.0 251 88.0
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 9.1e-130 467.2 292 75.7
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.5e-129 466.5 288 78.8
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 7.7e-129 464.2 311 74.9
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.9e-127 459.5 274 79.9
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.6e-124 449.1 290 75.9
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.7e-123 446.4 290 75.9
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 3.7e-123 445.3 285 72.3
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 4.8e-123 444.9 286 72.0
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.0e-120 437.2 309 69.3
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 3.8e-120 435.3 271 79.0
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.6e-118 428.7 281 70.5
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 5.0e-112 408.3 267 71.2
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.1e-111 407.1 271 70.1
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 1.2e-108 397.1 281 66.2
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 3.1e-98 362.5 221 77.4
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.4e-93 347.1 323 59.4
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.4e-83 311.6 190 82.1
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.4e-82 310.5 289 51.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 3.5e-81 305.8 181 80.7
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.7e-80 303.5 296 52.7
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 3.9e-80 302.4 181 80.7
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 7.3e-79 298.1 171 84.2
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 9.5e-79 297.7 188 74.5
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.6e-78 297.0 290 53.1
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.1e-71 274.2 293 47.4
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.1e-58 231.1 311 44.1
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 3.5e-57 226.1 164 70.1
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-52 211.1 222 53.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.4e-52 209.1 219 53.4
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.9e-48 196.1 106 84.9
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.1e-41 173.7 99 82.8
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.5e-41 172.9 100 81.0
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.8e-38 163.3 95 81.1
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.7e-27 127.5 76 78.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.7e-23 112.5 165 41.8
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.5e-20 104.4 95 60.0
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.9e-10 70.9 51 62.7
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.6e-09 67.8 40 80.0


User provided reference genes

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