Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 1.2e-115 419.9 216 100.0
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 3.4e-81 305.4 199 78.9
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 8.3e-80 300.8 201 78.6
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 2.7e-78 295.8 201 78.6
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 5.9e-78 294.7 201 78.1
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 1.7e-77 293.1 199 78.9
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 8.6e-77 290.8 201 77.6
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 1.1e-76 290.4 207 75.8
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 2.5e-76 289.3 200 79.0
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 4.3e-76 288.5 200 78.5
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 3.6e-75 285.4 197 77.7
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 6.8e-74 281.2 199 75.4
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 1.4e-71 273.5 203 73.4
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.2e-70 270.4 200 77.5
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 5.9e-70 268.1 177 79.1
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 7.8e-70 267.7 197 74.6
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 1.0e-69 267.3 193 73.6
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 1.0e-69 267.3 173 79.8
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 3.0e-69 265.8 156 85.9
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 8.6e-69 264.2 196 76.0
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.5e-68 263.5 197 74.1
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 2.5e-68 262.7 204 70.1
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 3.3e-68 262.3 199 72.4
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 4.3e-68 261.9 196 74.5
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 5.6e-68 261.5 199 73.9
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 5.6e-68 261.5 174 77.0
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 1.6e-67 260.0 197 72.6
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 2.8e-67 259.2 199 72.4
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 4.7e-67 258.5 200 69.5
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 6.2e-67 258.1 199 70.9
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 6.2e-67 258.1 201 71.1
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 3.1e-66 255.8 203 71.4
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 3.1e-66 255.8 203 71.4
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 8.9e-66 254.2 159 80.5
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 8.9e-66 254.2 169 75.7
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 1.5e-65 253.4 199 70.4
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 2.6e-65 252.7 192 70.3
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 2.6e-65 252.7 195 70.8
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 2.6e-65 252.7 197 71.1
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 3.4e-65 252.3 156 80.1
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 4.4e-65 251.9 194 69.6
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 7.5e-65 251.1 198 68.7
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 7.5e-65 251.1 197 70.6
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 9.8e-65 250.8 170 76.5
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 9.8e-65 250.8 189 70.9
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 9.8e-65 250.8 156 79.5
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 1.7e-64 250.0 165 78.2
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 2.9e-64 249.2 201 72.1
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 2.9e-64 249.2 180 73.9
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 2.9e-64 249.2 192 75.5
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 6.4e-64 248.1 202 69.8
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.9e-63 246.5 151 80.1
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 7.0e-63 244.6 178 73.6
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 7.0e-63 244.6 195 69.7
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 1.6e-62 243.4 193 67.9
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.0e-62 243.0 168 74.4
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.7e-62 242.7 180 71.1
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 3.5e-62 242.3 196 69.4
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 4.6e-62 241.9 199 67.8
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 7.8e-62 241.1 196 67.3
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 7.8e-62 241.1 202 67.3
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 1.7e-61 240.0 196 69.4
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 1.7e-61 240.0 188 70.7
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 2.3e-61 239.6 193 68.4
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 3.0e-61 239.2 200 67.5
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 3.0e-61 239.2 202 66.8
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 5.0e-61 238.4 201 70.1
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 6.6e-61 238.0 206 64.6
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 6.6e-61 238.0 199 67.8
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 6.6e-61 238.0 191 66.0
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 6.6e-61 238.0 182 70.3
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 8.6e-61 237.7 167 73.1
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 1.1e-60 237.3 183 69.9
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 3.3e-60 235.7 190 68.4
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 7.3e-60 234.6 194 66.0
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 7.3e-60 234.6 133 85.7
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 7.3e-60 234.6 133 85.7
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 7.3e-60 234.6 194 68.0
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 7.3e-60 234.6 190 67.9
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 7.3e-60 234.6 190 67.9
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 7.3e-60 234.6 192 65.1
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.2e-59 233.8 195 65.1
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 1.2e-59 233.8 150 79.3
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 2.8e-59 232.6 133 84.2
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 6.2e-59 231.5 197 65.5
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 6.8e-58 228.0 201 66.7
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 1.5e-57 226.9 183 67.8
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 9.8e-57 224.2 191 66.0
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 1.4e-55 220.3 195 65.6
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 1.2e-54 217.2 198 62.1
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 1.2e-54 217.2 116 88.8
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 4.6e-54 215.3 118 89.8
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.0e-53 214.2 130 82.3
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 2.5e-52 209.5 183 63.9
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.4e-50 203.8 159 67.9
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 4.0e-50 202.2 164 66.5
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 6.8e-50 201.4 186 61.8
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 9.9e-49 197.6 133 75.9
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 2.1e-46 189.9 113 78.8
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 4.6e-46 188.7 111 76.6
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 6.0e-46 188.3 113 79.6
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 1.0e-45 187.6 182 58.8
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 3.9e-45 185.7 122 70.5
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 1.5e-44 183.7 155 63.9
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 2.8e-43 179.5 110 76.4
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 8.4e-40 167.9 196 53.6
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 5.1e-37 158.7 110 63.6
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 6.2e-35 151.8 195 48.7
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.2e-22 110.9 125 40.8
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 1.3e-19 100.9 109 43.1
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 4.5e-17 92.4 106 45.3
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 7.6e-17 91.7 52 82.7
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 3.8e-16 89.4 157 31.2


User provided reference genes

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