Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc181.2 Carica papaya HOM05D000002 ORTHO05D000001 2.9e-73 278.5 141 100.0
TWI15G1219 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.0e-13 79.7 82 47.6
TWI31G0090 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.3e-12 77.0 82 45.1
Duzib084G1319 Durio zibethinus HOM05D000002 ORTHO05D000001 2.0e-10 69.7 81 44.4
TWI38G0170 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 3.5e-10 68.9 80 43.8
Duzib170G0347 Durio zibethinus HOM05D000002 ORTHO05D000001 5.9e-10 68.2 81 43.2
Gorai.005G117400 Gossypium raimondii HOM05D000002 ORTHO05D000001 5.9e-10 68.2 81 42.0
Eucgr.C00972 Eucalyptus grandis HOM05D000002 ORTHO05D000001 7.7e-10 67.8 81 46.9
Thecc.05G264300 Theobroma cacao HOM05D000002 ORTHO05D000001 1.7e-09 66.6 81 40.7
Duzib213G0091 Durio zibethinus HOM05D000002 ORTHO05D000001 2.2e-09 66.2 81 42.0
Manes.10G049666 Manihot esculenta HOM05D000002 ORTHO05D000001 2.2e-09 66.2 83 44.6
Duzib041G0290 Durio zibethinus HOM05D000002 ORTHO05D000001 2.9e-09 65.9 81 42.0
Duzib212G0395 Durio zibethinus HOM05D000002 ORTHO05D000001 2.9e-09 65.9 81 42.0
Eucgr.I00145 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.9e-09 65.9 74 44.6
Eucgr.E01889 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.8e-09 65.5 81 43.2
Duzib128G0886 Durio zibethinus HOM05D000002 ORTHO05D000001 5.0e-09 65.1 81 42.0
Duzib170G0368 Durio zibethinus HOM05D000002 ORTHO05D000001 5.0e-09 65.1 81 42.0
Eucgr.C03386 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.5e-09 64.7 81 42.0
Eucgr.H01309 Eucalyptus grandis HOM05D000002 ORTHO05D000001 8.5e-09 64.3 74 47.3
Eucgr.C02847 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-08 63.9 74 45.9
Eucgr.F01722 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-08 63.9 74 44.6
Eucgr.H05143 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-08 63.9 74 45.9
Eucgr.L01126 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-08 63.9 74 45.9
Eucgr.H04178 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.9e-08 63.2 74 47.3
Eucgr.C04364 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.5e-08 62.8 74 43.2
Eucgr.K03052 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.5e-08 62.8 74 45.9
Sopen01g025280 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-08 62.8 84 44.0
Eucgr.B00919 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.2e-08 62.4 74 43.2
Manes.11G110350 Manihot esculenta HOM05D000002 ORTHO05D000001 3.2e-08 62.4 84 39.3
Eucgr.D00207 Eucalyptus grandis HOM05D000002 ORTHO05D000001 4.2e-08 62.0 81 43.2
CSS0037302 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-08 61.2 67 47.8
Eucgr.C03626 Eucalyptus grandis HOM05D000002 ORTHO05D000001 9.4e-08 60.8 71 43.7
Eucgr.F00519 Eucalyptus grandis HOM05D000002 ORTHO05D000001 9.4e-08 60.8 81 42.0
TWI09G1183 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.4e-08 60.8 82 35.4
TWI79G0963 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.4e-08 60.8 77 36.4
PGR004G1580 Punica granatum HOM05D000002 ORTHO05D000001 1.6e-07 60.1 81 40.7
CSS0002307 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-07 59.7 74 45.9
CAN.G694.52 Capsicum annuum HOM05D000264 ORTHO05D000152 2.1e-07 59.7 74 44.6
Eucgr.L03606 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.7e-07 59.3 70 45.7
PGR142G1019 Punica granatum HOM05D000002 ORTHO05D000001 2.7e-07 59.3 71 45.1
Sopen05g020560 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 59.3 84 41.7
CAN.G1045.29 Capsicum annuum HOM05D000001 ORTHO05D010162 3.6e-07 58.9 67 46.3
CAN.G1337.33 Capsicum annuum HOM05D001608 ORTHO05D002070 3.6e-07 58.9 76 46.1
Duzib211G0111 Durio zibethinus HOM05D000002 ORTHO05D000001 3.6e-07 58.9 74 44.6
Eucgr.G01578 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.6e-07 58.9 74 41.9
PGR102G3201 Punica granatum HOM05D000002 ORTHO05D000001 3.6e-07 58.9 77 40.3
PGR129G0010 Punica granatum HOM05D000002 ORTHO05D000001 3.6e-07 58.9 81 39.5
Thecc.10G160200 Theobroma cacao HOM05D000002 ORTHO05D000001 3.6e-07 58.9 76 38.2
Atru.chr10.209 Acer truncatum HOM05D000002 ORTHO05D000001 4.7e-07 58.5 72 40.3
Hma1.2p1_0243F.1_g100950 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.7e-07 58.5 77 44.2
PGR102G0886 Punica granatum HOM05D000002 ORTHO05D000001 4.7e-07 58.5 81 39.5
THA.LOC104801932 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.7e-07 58.5 78 44.9
CAN.G339.2 Capsicum annuum HOM05D000073 ORTHO05D011077 6.1e-07 58.2 75 42.7
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 6.1e-07 58.2 80 41.2
CsaV3_5G024630 Cucumis sativus L. HOM05D000002 ORTHO05D000001 6.1e-07 58.2 81 39.5
Lj3g0008931 Lotus japonicus HOM05D000002 ORTHO05D000001 6.1e-07 58.2 74 43.2
PGR042G1475 Punica granatum HOM05D000002 ORTHO05D000001 8.0e-07 57.8 81 38.3
Sopen01g009970 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 57.8 84 41.7
THA.LOC104798816 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.0e-07 57.8 78 43.6
THA.LOC104801877 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.0e-07 57.8 67 43.3
THA.LOC104821175 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.0e-07 57.8 78 44.9
Eucgr.K03232 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 81 39.5
PGR142G1863 Punica granatum HOM05D000002 ORTHO05D000001 1.0e-06 57.4 81 38.3
Sopen08g020550 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.4 84 41.7
THA.LOC104825922 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-06 57.4 67 46.3
THA.LOC109116421 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-06 57.4 67 46.3
GSVIVG01015124001 Vitis vinifera HOM05D000844 ORTHO05D000680 1.0e-06 57.4 82 40.2
Eucgr.C02657 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 70 42.9
Gorai.011G263500 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.8e-06 56.6 74 37.8
TWI15G1217 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.8e-06 56.6 61 42.6
Sopen02g010710 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 56.2 71 45.1
CAN.G1090.20 Capsicum annuum HOM05D000002 ORTHO05D000001 5.2e-06 55.1 83 41.0
PGR119G1744 Punica granatum HOM05D000002 ORTHO05D000001 5.2e-06 55.1 74 39.2
TWI14G0389 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 5.2e-06 55.1 74 41.9
Duzib138G1479 Durio zibethinus HOM05D000002 ORTHO05D000001 6.7e-06 54.7 74 41.9
PGSC0003DMG400006637 Solanum tuberosum HOM05D000002 ORTHO05D000001 6.7e-06 54.7 53 52.8
Sopen02g005350 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-06 54.3 84 39.3
PGSC0003DMG400016677 Solanum tuberosum HOM05D000002 ORTHO05D000001 8.8e-06 54.3 53 52.8


User provided reference genes

Program Settings