Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1800.1 Carica papaya HOM05D000270 ORTHO05D000163 4.7e-17 90.1 46 100.0
Duzib147G0206 Durio zibethinus HOM05D000270 ORTHO05D000163 1.7e-11 71.6 46 76.1
Gohir.A05G366100 Gossypium hirsutum HOM05D000270 ORTHO05D000163 3.0e-11 70.9 46 73.9
Gohir.D04G048900 Gossypium hirsutum HOM05D000270 ORTHO05D000163 3.0e-11 70.9 46 73.9
Gorai.012G054200 Gossypium raimondii HOM05D000270 ORTHO05D000163 3.0e-11 70.9 46 73.9
COL.COLO4_33307 Corchorus olitorius HOM05D000270 ORTHO05D000163 3.9e-11 70.5 46 73.9
Duzib264G0496 Durio zibethinus HOM05D000270 ORTHO05D000163 8.6e-11 69.3 46 73.9
Thecc.04G082000 Theobroma cacao HOM05D000270 ORTHO05D000163 8.6e-11 69.3 45 75.6
Haze_14529 Corylus avellana HOM05D000270 ORTHO05D000163 5.6e-10 66.6 45 73.3
Haze_14532 Corylus avellana HOM05D000270 ORTHO05D000163 5.6e-10 66.6 45 73.3
Ciclev10013454m.g Citrus clementina HOM05D000270 ORTHO05D000163 1.2e-09 65.5 46 69.6
Manes.02G046400 Manihot esculenta HOM05D000270 ORTHO05D000163 1.6e-09 65.1 47 72.3
Duzib187G0389 Durio zibethinus HOM05D000270 ORTHO05D000163 2.8e-09 64.3 46 69.6
Gohir.A09G016300 Gossypium hirsutum HOM05D000270 ORTHO05D000163 2.8e-09 64.3 46 67.4
Gohir.D09G014900 Gossypium hirsutum HOM05D000270 ORTHO05D000163 2.8e-09 64.3 46 67.4
Gorai.006G017000 Gossypium raimondii HOM05D000270 ORTHO05D000163 2.8e-09 64.3 46 67.4
GSVIVG01011412001 Vitis vinifera HOM05D000270 ORTHO05D000163 6.2e-09 63.2 46 67.4
PGR142G3238 Punica granatum HOM05D000270 ORTHO05D000163 8.1e-09 62.8 45 66.7
FvH4_6g48590 Fragaria vesca HOM05D000270 ORTHO05D000163 1.4e-08 62.0 46 69.6
FAN14G3407 Fragaria x ananassa HOM05D000270 ORTHO05D000163 1.4e-08 62.0 46 69.6
FAN14G4013 Fragaria x ananassa HOM05D000270 ORTHO05D000163 1.4e-08 62.0 46 69.6
Lj2g0015615 Lotus japonicus HOM05D000270 ORTHO05D000163 1.4e-08 62.0 47 70.2
QL02p082184 Quercus lobata HOM05D000270 ORTHO05D000163 1.8e-08 61.6 47 66.0
arahy.Tifrunner.gnm1.ann1.FJ610L Arachis hypogaea HOM05D000270 ORTHO05D000163 2.4e-08 61.2 47 72.3
FAN09G0586 Fragaria x ananassa HOM05D009987 ORTHO05D010465 3.1e-08 60.8 46 67.4
FAN09G4393 Fragaria x ananassa HOM05D000270 ORTHO05D000163 3.1e-08 60.8 46 67.4
Medtr6g012360 Medicago truncatula HOM05D000270 ORTHO05D000163 3.1e-08 60.8 47 66.0
Manes.01G091100 Manihot esculenta HOM05D000270 ORTHO05D000163 4.0e-08 60.5 47 63.8
Potri.017G083000 Populus trichocarpa HOM05D000270 ORTHO05D000163 4.0e-08 60.5 47 68.1
CiPaw.03G026900 Carya illinoinensis HOM05D000270 ORTHO05D000163 5.2e-08 60.1 47 68.1
Glyma.19G022500 Glycine max HOM05D000270 ORTHO05D000163 5.2e-08 60.1 45 66.7
Lalb_Chr02g0159351 Lupinus albus HOM05D000270 ORTHO05D000163 5.2e-08 60.1 45 66.7
RcHm_v2.0_Chr2g0168411 Rosa chinensis HOM05D000270 ORTHO05D000163 5.2e-08 60.1 44 68.2
arahy.Tifrunner.gnm1.ann1.F1TUFL Arachis hypogaea HOM05D000270 ORTHO05D000163 8.9e-08 59.3 46 65.2
FAN05G3228 Fragaria x ananassa HOM05D000270 ORTHO05D000163 8.9e-08 59.3 45 68.9
Actinidia06095 Actinidia chinensis HOM05D000270 ORTHO05D000163 1.5e-07 58.5 46 63.0
CiPaw.04G017100 Carya illinoinensis HOM05D000270 ORTHO05D000163 1.5e-07 58.5 47 70.2
FAN02G3792 Fragaria x ananassa HOM05D000270 ORTHO05D000163 1.5e-07 58.5 46 67.4
Phvul.004G028800 Phaseolus vulgaris HOM05D000270 ORTHO05D000163 1.5e-07 58.5 46 63.0
VMungo0464G1211 Vigna mungo HOM05D000270 ORTHO05D000163 1.5e-07 58.5 46 63.0
MD17G1041500 Malus domestica HOM05D000270 ORTHO05D000163 2.6e-07 57.8 45 68.9
CANSAT64G2367 Cannabis sativa HOM05D000270 ORTHO05D000163 3.4e-07 57.4 46 60.9
Prupe.3G267600 Prunus persica HOM05D000270 ORTHO05D000163 4.4e-07 57.0 46 67.4
arahy.Tifrunner.gnm1.ann1.X9WA5F Arachis hypogaea HOM05D009987 ORTHO05D010465 7.6e-07 56.2 43 74.4
Medtr7g010580 Medicago truncatula HOM05D000270 ORTHO05D000163 7.6e-07 56.2 47 68.1
Actinidia36009 Actinidia chinensis HOM05D000270 ORTHO05D000163 9.9e-07 55.8 44 63.6
TWI34G1728 Tripterygium wilfordii HOM05D000270 ORTHO05D000163 9.9e-07 55.8 47 63.8
Glyma.09G238300 Glycine max HOM05D000270 ORTHO05D000163 2.2e-06 54.7 47 66.0
MD09G1051300 Malus domestica HOM05D000270 ORTHO05D000163 2.9e-06 54.3 45 66.7
Dinv33759 Davidia involucrata HOM05D000270 ORTHO05D000163 4.9e-06 53.5 45 66.7
Psat3g197600 Pisum sativum HOM05D000270 ORTHO05D000163 4.9e-06 53.5 47 63.8
Dinv11525 Davidia involucrata HOM05D000270 ORTHO05D000163 6.4e-06 53.1 46 60.9


User provided reference genes

Program Settings