Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 1.6e-76 289.3 141 100.0
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 5.3e-35 151.4 93 74.2
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 5.3e-35 151.4 93 73.1
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 1.5e-34 149.8 93 72.0
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 2.6e-34 149.1 93 71.0
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 3.4e-34 148.7 91 73.6
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 1.3e-33 146.7 93 71.0
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 1.3e-33 146.7 93 72.0
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 1.7e-33 146.4 91 72.5
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.7e-33 146.4 91 72.5
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.7e-33 146.4 91 72.5
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 1.7e-33 146.4 91 68.1
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 2.2e-33 146.0 93 69.9
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 2.2e-33 146.0 91 75.8
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 2.9e-33 145.6 117 60.7
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 2.9e-33 145.6 93 68.8
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 2.9e-33 145.6 93 72.0
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 3.8e-33 145.2 93 66.7
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 3.8e-33 145.2 93 66.7
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 3.8e-33 145.2 93 71.0
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 5.0e-33 144.8 91 72.5
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 6.5e-33 144.4 93 66.7
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 8.5e-33 144.1 91 70.3
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 1.1e-32 143.7 93 71.0
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 1.4e-32 143.3 93 71.0
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 1.4e-32 143.3 91 69.2
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 1.9e-32 142.9 91 72.5
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.9e-32 142.9 91 70.3
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 5.5e-32 141.4 93 72.0
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 5.5e-32 141.4 93 68.8
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 5.5e-32 141.4 93 66.7
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 7.2e-32 141.0 93 66.7
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 1.2e-31 140.2 93 72.0
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 1.2e-31 140.2 93 66.7
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 1.6e-31 139.8 91 70.3
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 2.1e-31 139.4 93 72.0
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 2.7e-31 139.0 93 64.5
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 3.6e-31 138.7 93 65.6
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 6.1e-31 137.9 93 69.9
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 7.9e-31 137.5 92 69.6
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 7.9e-31 137.5 93 65.6
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 1.0e-30 137.1 91 71.4
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 1.3e-30 136.7 93 66.7
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 3.0e-30 135.6 88 71.6
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 3.0e-30 135.6 93 66.7
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 3.9e-30 135.2 93 65.6
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 5.1e-30 134.8 92 68.5
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 6.7e-30 134.4 93 66.7
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 8.7e-30 134.0 91 67.0
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 8.7e-30 134.0 108 62.0
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 1.5e-29 133.3 91 62.6
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 1.9e-29 132.9 91 63.7
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 2.5e-29 132.5 93 64.5
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 2.5e-29 132.5 91 62.6
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 2.5e-29 132.5 93 64.5
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 2.5e-29 132.5 91 62.6
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 3.3e-29 132.1 91 64.8
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 3.3e-29 132.1 93 64.5
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 5.7e-29 131.3 91 61.5
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 5.7e-29 131.3 91 62.6
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 9.7e-29 130.6 91 60.4
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 9.7e-29 130.6 91 65.9
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 9.7e-29 130.6 91 61.5
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 1.3e-28 130.2 93 63.4
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 1.6e-28 129.8 91 67.0
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 2.2e-28 129.4 91 63.7
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 2.2e-28 129.4 107 58.9
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 3.7e-28 128.6 91 61.5
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 3.7e-28 128.6 91 61.5
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 3.7e-28 128.6 91 61.5
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 3.7e-28 128.6 91 61.5
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 3.7e-28 128.6 91 61.5
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 3.7e-28 128.6 93 67.7
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 3.7e-28 128.6 93 67.7
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 4.8e-28 128.3 93 64.5
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 4.8e-28 128.3 93 62.4
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 8.2e-28 127.5 91 61.5
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 1.1e-27 127.1 95 63.2
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 1.4e-27 126.7 93 62.4
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 1.8e-27 126.3 91 63.7
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 3.1e-27 125.6 93 66.7
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 4.1e-27 125.2 91 59.3
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 5.3e-27 124.8 91 60.4
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 6.9e-27 124.4 103 57.3
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 9.1e-27 124.0 93 61.3
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 2.0e-26 122.9 93 62.4
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 3.4e-26 122.1 93 61.3
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 1.7e-25 119.8 91 57.1
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 1.7e-25 119.8 91 61.5
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 1.4e-24 116.7 91 57.1
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 4.2e-24 115.2 122 50.8
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 4.6e-23 111.7 87 55.2
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 3.3e-21 105.5 57 78.9
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 1.7e-20 103.2 55 80.0
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 4.1e-19 98.6 56 76.8
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 1.0e-17 94.0 90 50.0
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 1.4e-14 83.6 90 40.0
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.2e-10 70.5 35 77.1


User provided reference genes

Program Settings