Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 1.0e-38 162.9 83 100.0
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 2.7e-31 138.3 81 86.4
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 7.9e-31 136.7 81 85.2
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 7.9e-31 136.7 81 86.4
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 1.8e-30 135.6 81 85.2
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 6.7e-30 133.7 81 85.2
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 8.8e-30 133.3 81 82.7
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 1.5e-29 132.5 81 82.7
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 2.0e-29 132.1 81 81.5
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 3.3e-29 131.3 81 85.2
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 3.3e-29 131.3 81 79.0
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 1.3e-28 129.4 81 82.7
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 1.3e-28 129.4 81 81.5
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 2.8e-28 128.3 81 81.5
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 2.8e-28 128.3 81 79.0
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 3.7e-28 127.9 81 79.0
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 1.4e-27 125.9 81 79.0
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 1.8e-27 125.6 81 77.8
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 4.1e-27 124.4 81 81.5
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 7.0e-27 123.6 76 80.3
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 7.0e-27 123.6 81 75.3
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.2e-26 122.9 81 75.3
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.2e-26 122.9 81 74.1
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 1.6e-26 122.5 81 74.1
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.6e-26 122.5 81 74.1
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.6e-26 122.5 81 74.1
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 4.5e-26 120.9 81 74.1
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 4.5e-26 120.9 81 74.1
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 1.0e-25 119.8 81 76.5
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 1.3e-25 119.4 77 77.9
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 1.7e-25 119.0 81 76.5
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 1.7e-25 119.0 81 71.6
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 2.2e-25 118.6 81 72.8
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 2.9e-25 118.2 81 76.5
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 2.9e-25 118.2 81 71.6
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 2.9e-25 118.2 81 71.6
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 2.9e-25 118.2 81 74.1
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 6.5e-25 117.1 81 71.6
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 8.5e-25 116.7 81 71.6
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 1.5e-24 115.9 81 71.6
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 1.5e-24 115.9 81 74.1
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.9e-24 115.5 81 67.9
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 3.2e-24 114.8 81 72.8
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 3.2e-24 114.8 81 74.1
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 3.2e-24 114.8 81 66.7
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 3.2e-24 114.8 81 67.9
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 5.5e-24 114.0 81 70.4
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 5.5e-24 114.0 81 66.7
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 5.5e-24 114.0 80 72.5
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 7.2e-24 113.6 81 70.4
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 7.2e-24 113.6 81 72.8
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 7.2e-24 113.6 69 79.7
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 7.2e-24 113.6 81 69.1
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 7.2e-24 113.6 81 69.1
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 9.4e-24 113.2 82 73.2
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 1.6e-23 112.5 81 69.1
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 2.1e-23 112.1 81 67.9
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 2.7e-23 111.7 81 72.8
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 3.6e-23 111.3 76 72.4
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 3.6e-23 111.3 76 69.7
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 4.7e-23 110.9 81 69.1
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 4.7e-23 110.9 81 65.4
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 6.1e-23 110.5 81 69.1
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 6.1e-23 110.5 67 79.1
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 6.1e-23 110.5 76 73.7
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 8.0e-23 110.2 76 73.7
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 8.0e-23 110.2 81 72.8
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 8.0e-23 110.2 81 72.8
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 8.0e-23 110.2 81 65.4
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 1.4e-22 109.4 75 69.3
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 2.3e-22 108.6 81 69.1
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 2.3e-22 108.6 81 66.7
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 3.0e-22 108.2 76 67.1
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 3.0e-22 108.2 81 66.7
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 4.0e-22 107.8 76 69.7
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 6.7e-22 107.1 81 69.1
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 6.7e-22 107.1 81 65.4
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.1e-21 106.3 76 65.8
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 1.1e-21 106.3 81 64.2
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 1.1e-21 106.3 81 65.4
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 1.5e-21 105.9 81 67.9
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 2.6e-21 105.1 77 66.2
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 4.4e-21 104.4 81 66.7
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 4.4e-21 104.4 81 65.4
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 7.5e-21 103.6 76 63.2
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 9.7e-21 103.2 68 76.5
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 1.7e-20 102.4 68 76.5
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 3.7e-20 101.3 82 63.4
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 4.8e-20 100.9 72 73.6
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 1.4e-19 99.4 77 66.2
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 1.4e-19 99.4 77 66.2
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 1.4e-19 99.4 77 66.2
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 1.4e-19 99.4 76 64.5
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 1.8e-19 99.0 77 64.9
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 1.8e-19 99.0 77 64.9
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 2.0e-18 95.5 77 59.7
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 7.7e-18 93.6 80 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 2.0e-13 79.0 67 59.7


User provided reference genes

Program Settings