Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 8.8e-131 470.3 240 100.0
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 5.8e-58 228.4 172 69.8
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 9.9e-58 227.6 169 72.2
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 2.9e-57 226.1 163 73.6
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 3.8e-57 225.7 163 72.4
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 8.4e-57 224.6 163 69.9
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 1.4e-56 223.8 163 73.6
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 1.9e-56 223.4 164 73.8
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 1.9e-56 223.4 164 73.8
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 1.9e-56 223.4 164 73.8
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 3.2e-56 222.6 172 67.4
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 1.2e-55 220.7 163 73.0
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 1.2e-55 220.7 163 73.0
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 4.6e-55 218.8 163 71.8
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 1.0e-54 217.6 164 70.7
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 5.1e-54 215.3 172 68.6
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 8.7e-54 214.5 165 71.5
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 2.5e-53 213.0 163 68.7
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 3.3e-53 212.6 179 63.7
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 5.6e-53 211.8 179 64.2
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 5.6e-53 211.8 163 69.9
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 3.6e-52 209.1 163 66.9
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 1.8e-51 206.8 171 62.6
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 1.8e-51 206.8 179 62.0
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 6.9e-51 204.9 163 63.8
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.5e-50 203.8 164 63.4
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 1.5e-50 203.8 163 69.9
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 3.4e-50 202.6 163 66.9
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 3.4e-50 202.6 164 66.5
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 7.6e-50 201.4 164 64.0
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 1.3e-49 200.7 164 65.2
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 1.3e-49 200.7 164 65.2
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 1.3e-49 200.7 164 65.2
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 2.2e-49 199.9 163 68.7
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 2.9e-49 199.5 164 64.6
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 2.9e-49 199.5 164 64.6
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 2.9e-49 199.5 166 65.1
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 2.9e-49 199.5 163 68.1
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 2.9e-49 199.5 163 68.1
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 2.9e-49 199.5 163 68.1
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 3.8e-49 199.1 147 69.4
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 3.8e-49 199.1 173 61.8
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 3.8e-49 199.1 164 64.0
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 6.4e-49 198.4 164 64.6
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 1.4e-48 197.2 166 63.3
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.9e-48 196.8 163 68.1
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 1.9e-48 196.8 169 62.1
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 2.4e-48 196.4 164 62.2
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 2.4e-48 196.4 196 56.1
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 3.2e-48 196.1 164 63.4
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 3.2e-48 196.1 169 63.9
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 4.2e-48 195.7 163 64.4
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 7.1e-48 194.9 147 70.1
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 1.2e-47 194.1 165 63.6
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 2.1e-47 193.4 173 60.1
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 2.7e-47 193.0 164 63.4
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 4.6e-47 192.2 196 56.6
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 4.6e-47 192.2 177 61.0
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 6.0e-47 191.8 175 60.0
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 6.0e-47 191.8 196 56.6
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 7.9e-47 191.4 163 61.3
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 7.9e-47 191.4 164 62.2
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.8e-46 190.3 177 61.6
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 3.0e-46 189.5 163 63.8
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 3.9e-46 189.1 163 63.2
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 3.9e-46 189.1 163 60.1
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 5.1e-46 188.7 177 59.9
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 6.7e-46 188.3 163 61.3
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 6.7e-46 188.3 163 61.3
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 8.7e-46 188.0 163 61.3
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 8.7e-46 188.0 166 62.0
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 1.1e-45 187.6 179 59.2
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 1.1e-45 187.6 179 59.2
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 1.1e-45 187.6 164 62.2
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 1.5e-45 187.2 163 62.6
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 1.5e-45 187.2 163 63.2
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 1.9e-45 186.8 163 62.6
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 9.6e-45 184.5 196 55.6
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 4.8e-44 182.2 165 59.4
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 6.2e-44 181.8 163 62.0
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 1.1e-43 181.0 163 60.1
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 1.4e-43 180.6 167 62.3
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 1.4e-43 180.6 163 60.1
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 1.8e-43 180.3 173 59.0
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 5.3e-43 178.7 165 60.0
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 1.5e-42 177.2 163 60.1
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 2.0e-42 176.8 169 56.2
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 2.6e-42 176.4 186 51.1
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 5.8e-42 175.3 163 57.7
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 3.8e-41 172.6 169 56.2
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 4.9e-41 172.2 166 59.6
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 4.9e-41 172.2 163 59.5
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 3.0e-38 162.9 167 55.1
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 3.9e-38 162.5 164 55.5
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 1.6e-36 157.1 168 55.4
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 1.6e-36 157.1 163 57.1
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 3.4e-34 149.4 164 53.7
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 3.4e-34 149.4 167 52.1
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 2.4e-19 100.1 163 38.0
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 4.1e-11 72.8 174 33.3


User provided reference genes

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