Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 6.0e-244 847.0 415 100.0
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 2.4e-136 489.6 393 64.6
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 3.4e-130 469.2 407 60.7
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 9.8e-130 467.6 390 63.1
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 9.2e-128 461.1 405 60.7
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 1.6e-127 460.3 396 62.1
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 2.7e-127 459.5 385 61.8
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 4.6e-127 458.8 386 62.2
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 1.3e-126 457.2 391 61.4
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 1.7e-126 456.8 385 61.3
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 5.0e-126 455.3 392 59.7
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 8.6e-126 454.5 394 60.9
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.9e-125 453.4 392 59.2
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 1.6e-124 450.3 420 56.9
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 2.1e-124 449.9 392 59.2
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 2.8e-124 449.5 395 60.0
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 2.8e-124 449.5 390 60.5
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 3.6e-124 449.1 392 58.7
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 4.7e-124 448.7 389 59.4
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 1.4e-123 447.2 396 61.6
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 3.1e-123 446.0 399 59.1
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 6.8e-123 444.9 400 59.0
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 8.9e-123 444.5 404 58.4
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 8.9e-123 444.5 406 58.1
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 1.5e-122 443.7 396 61.1
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 5.4e-120 435.3 398 56.8
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 3.3e-117 426.0 402 58.7
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 1.6e-116 423.7 395 55.4
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 6.2e-116 421.8 400 56.5
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.4e-115 420.6 404 55.4
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 1.4e-115 420.6 396 57.1
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 1.4e-115 420.6 396 57.1
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 2.3e-115 419.9 399 55.9
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 3.1e-115 419.5 396 57.1
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 6.8e-115 418.3 399 55.6
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 6.8e-115 418.3 399 55.6
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 6.8e-115 418.3 390 57.2
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 9.9e-114 414.5 395 55.7
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 9.9e-114 414.5 395 55.7
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 9.9e-114 414.5 395 55.7
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 4.9e-113 412.1 394 55.6
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 8.4e-113 411.4 397 55.7
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.4e-112 410.6 403 54.6
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 1.9e-112 410.2 399 54.9
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 1.9e-112 410.2 400 55.2
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 1.9e-112 410.2 393 55.7
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 4.1e-112 409.1 399 54.9
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 4.1e-112 409.1 398 56.3
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 5.4e-112 408.7 414 53.9
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 9.2e-112 407.9 405 53.6
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.2e-111 407.5 398 55.5
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 1.6e-111 407.1 383 55.6
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 1.6e-111 407.1 397 55.9
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 2.1e-111 406.8 407 54.3
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 2.1e-111 406.8 396 55.1
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 4.6e-111 405.6 414 52.7
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 1.0e-110 404.4 412 53.4
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 1.7e-110 403.7 404 54.5
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 2.3e-110 403.3 414 53.4
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 5.6e-109 398.7 404 53.5
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 5.6e-109 398.7 398 53.5
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 3.4e-106 389.4 401 53.4
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 4.4e-106 389.0 392 52.3
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 3.8e-105 386.0 403 50.9
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 6.4e-105 385.2 407 49.9
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 1.9e-104 383.6 386 54.4
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 3.2e-104 382.9 394 51.8
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 5.4e-104 382.1 407 49.9
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 9.3e-104 381.3 399 51.6
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 1.2e-103 380.9 418 50.0
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 2.7e-103 379.8 393 52.9
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 4.6e-103 379.0 388 53.1
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 3.9e-102 375.9 398 52.5
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 6.6e-102 375.2 394 52.3
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 1.1e-101 374.4 407 49.4
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 1.9e-101 373.6 407 49.1
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 7.3e-101 371.7 412 47.3
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 1.3e-100 370.9 412 48.5
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 4.8e-100 369.0 410 50.2
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 1.4e-99 367.5 408 49.5
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 3.4e-98 362.8 408 48.3
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 2.7e-95 353.2 413 49.6
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 9.6e-93 344.7 420 45.7
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 1.1e-91 341.3 390 48.2
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 3.1e-91 339.7 399 47.1
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 2.0e-90 337.0 361 48.8
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 4.5e-90 335.9 389 49.1
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 5.8e-90 335.5 417 46.0
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 9.9e-90 334.7 418 44.5
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 1.3e-89 334.3 415 46.3
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 1.3e-89 334.3 374 49.2
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 1.6e-87 327.4 396 47.5
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 1.6e-87 327.4 388 48.2
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 2.1e-87 327.0 422 44.1
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 2.3e-86 323.6 387 47.0
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 2.3e-86 323.6 398 48.5
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 3.0e-86 323.2 386 47.4
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 2.8e-84 316.6 411 44.5
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 2.1e-79 300.4 441 41.7
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 2.1e-76 290.4 300 51.7
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 3.3e-61 240.0 454 35.7
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 5.0e-49 199.5 380 35.3
HanXRQChr15g0483621 Helianthus annuus HOM05D055280 ORTHO05D008092 5.2e-06 56.6 32 84.4
HanXRQChr17g0538801 Helianthus annuus HOM05D055280 ORTHO05D008092 5.2e-06 56.6 32 84.4


User provided reference genes

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