Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 7.3e-75 283.9 151 100.0
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 7.9e-21 104.4 149 49.7
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 1.1e-17 94.0 153 47.7
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 4.1e-17 92.0 145 50.3
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.5e-14 82.8 146 43.8
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 2.7e-13 79.3 98 55.1
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 2.7e-13 79.3 126 48.4
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 2.7e-13 79.3 126 48.4
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 8.0e-13 77.8 144 45.8
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 8.0e-13 77.8 145 44.1
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 8.0e-13 77.8 117 48.7
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.0e-12 77.4 117 48.7
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.4e-12 77.0 65 67.7
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 1.4e-12 77.0 65 67.7
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.8e-12 76.6 100 52.0
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 5.2e-12 75.1 65 66.2
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 2.6e-11 72.8 64 65.6
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 7.5e-11 71.2 109 48.6
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 7.5e-11 71.2 146 41.8
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 7.5e-11 71.2 97 51.5
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 7.5e-11 71.2 98 49.0
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 1.7e-10 70.1 83 50.6
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 2.8e-10 69.3 102 49.0
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 2.8e-10 69.3 83 55.4
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 4.8e-10 68.6 93 48.4
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 4.8e-10 68.6 64 65.6
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 8.2e-10 67.8 98 46.9
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 8.2e-10 67.8 99 48.5
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.1e-09 67.4 145 39.3
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 1.1e-09 67.4 114 44.7
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 1.4e-09 67.0 76 56.6
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 2.4e-09 66.2 134 41.0
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 4.1e-09 65.5 86 48.8
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 4.1e-09 65.5 86 48.8
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 4.1e-09 65.5 150 40.7
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 4.1e-09 65.5 76 52.6
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 7.0e-09 64.7 87 52.9
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 1.2e-08 63.9 106 45.3
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 1.2e-08 63.9 96 49.0
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.6e-08 63.5 97 46.4
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.0e-08 63.2 108 47.2
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 2.0e-08 63.2 113 43.4
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 2.7e-08 62.8 156 37.8
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 2.7e-08 62.8 95 46.3
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 3.5e-08 62.4 96 49.0
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 4.5e-08 62.0 106 46.2
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 7.7e-08 61.2 146 41.8
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 7.7e-08 61.2 63 55.6
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.0e-07 60.8 108 46.3
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 1.0e-07 60.8 139 43.2
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 3.8e-07 58.9 147 36.7
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 6.5e-07 58.2 86 47.7
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 1.5e-06 57.0 85 51.8
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 1.5e-06 57.0 89 44.9
CDE04G0133 Ceratophyllum demersum HOM05D000001 ORTHO05D000003 4.2e-06 55.5 74 51.4
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 7.2e-06 54.7 86 44.2


User provided reference genes

Program Settings