Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc18.42 Carica papaya HOM05D000361 ORTHO05D004243 1.9e-309 1065.1 561 100.0
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 7.0e-248 860.5 561 81.3
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 2.2e-241 839.0 554 79.8
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.4e-232 808.9 554 78.3
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 4.1e-232 808.1 554 78.0
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 2.7e-231 805.4 554 78.0
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 6.0e-231 804.3 560 76.6
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 3.9e-230 801.6 562 76.0
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 8.6e-230 800.4 554 76.7
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 2.1e-228 795.8 567 75.7
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 2.4e-227 792.3 554 75.1
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 4.0e-227 791.6 559 75.0
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 3.4e-226 788.5 562 74.2
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 3.8e-225 785.0 554 75.5
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 3.2e-224 781.9 562 74.2
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 3.0e-222 775.4 561 74.2
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 6.6e-222 774.2 562 73.7
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 4.3e-221 771.5 561 74.2
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 8.1e-220 767.3 553 74.5
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 4.0e-219 765.0 561 73.1
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 4.0e-219 765.0 554 73.8
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 5.3e-219 764.6 560 72.5
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 4.4e-218 761.5 560 73.9
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 2.2e-217 759.2 554 72.6
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 2.2e-217 759.2 561 71.8
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 6.4e-217 757.7 562 72.1
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 3.2e-216 755.4 525 76.6
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 9.6e-213 743.8 561 71.5
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 2.1e-212 742.7 559 70.5
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 2.8e-212 742.3 561 70.6
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 2.8e-212 742.3 562 70.5
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 1.1e-211 740.3 554 72.0
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 1.8e-211 739.6 560 70.0
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 5.3e-211 738.0 493 79.3
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 1.2e-210 736.9 554 71.5
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 2.6e-210 735.7 561 70.4
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 2.9e-209 732.3 559 69.4
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 5.5e-208 728.0 565 69.6
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 4.6e-207 724.9 571 68.7
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 3.3e-205 718.8 587 68.1
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 7.4e-205 717.6 559 68.5
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 4.8e-204 714.9 552 70.5
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.4e-203 713.4 600 66.8
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 6.9e-203 711.1 558 68.1
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 1.5e-202 709.9 562 67.8
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 4.5e-202 708.4 561 68.1
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 1.3e-201 706.8 559 68.5
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 2.9e-201 705.7 561 67.9
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 8.4e-201 704.1 557 67.1
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 1.1e-200 703.7 561 67.4
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 2.5e-200 702.6 564 67.4
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.2e-200 702.2 567 65.6
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 4.2e-200 701.8 554 66.4
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 5.5e-200 701.4 558 67.4
Atru.chr5.1003 Acer truncatum HOM05D000361 ORTHO05D004243 7.1e-200 701.0 481 78.2
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 7.1e-200 701.0 560 66.6
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 7.1e-200 701.0 559 66.7
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 9.3e-200 700.7 559 66.4
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 1.2e-199 700.3 561 67.4
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 4.6e-199 698.4 559 66.7
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 6.0e-199 698.0 562 67.6
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 6.0e-199 698.0 556 66.0
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 1.3e-198 696.8 556 66.9
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 2.3e-198 696.0 561 67.6
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 6.7e-198 694.5 554 66.6
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 6.7e-198 694.5 549 68.3
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 1.9e-197 693.0 555 67.0
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 3.3e-197 692.2 564 66.5
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.3e-196 690.3 563 66.6
ClCG10G006350 Citrullus lanatus HOM05D000361 ORTHO05D004243 2.1e-196 689.5 552 68.1
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 2.1e-196 689.5 556 66.5
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 8.2e-196 687.6 560 65.7
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 4.1e-195 685.3 557 66.4
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 5.3e-195 684.9 557 65.9
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 1.2e-194 683.7 556 65.8
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 3.4e-194 682.2 562 66.7
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 2.2e-193 679.5 556 65.6
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.1e-192 677.2 558 66.7
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 6.1e-191 671.4 560 66.2
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.8e-190 669.8 563 65.7
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 2.3e-190 669.5 560 65.0
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 1.5e-189 666.8 556 65.6
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.5e-189 666.8 581 64.0
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.5e-189 666.8 560 64.8
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 3.3e-189 665.6 547 65.8
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 5.7e-189 664.8 556 65.5
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.2e-188 662.9 559 65.5
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 6.3e-188 661.4 560 64.3
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 1.1e-187 660.6 555 64.0
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 1.1e-187 660.6 556 64.9
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 2.0e-186 656.4 565 63.5
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 2.6e-186 656.0 562 64.2
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 5.0e-185 651.7 556 64.2
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 3.6e-183 645.6 564 64.9
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 9.7e-181 637.5 584 61.6
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 2.2e-180 636.3 560 61.2
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 4.1e-179 632.1 560 62.1
Nitab4.5_0011075g0020 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.8e-177 625.5 563 60.9
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 2.5e-176 622.9 640 56.4
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 2.2e-172 609.8 560 59.3
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 2.4e-171 606.3 556 62.1
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 3.8e-169 599.0 687 52.8
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 5.0e-169 598.6 574 60.5
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 1.9e-168 596.7 545 61.5
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 1.8e-166 590.1 560 59.6
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 6.7e-166 588.2 556 60.4
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 4.4e-165 585.5 554 58.3
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 4.1e-163 578.9 558 59.9
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 3.5e-162 575.9 563 59.5
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 2.9e-161 572.8 642 55.3
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 1.9e-160 570.1 566 58.7
Gohir.D11G114600 Gossypium hirsutum HOM05D000361 ORTHO05D004243 1.2e-159 567.4 375 79.5
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.2e-159 567.4 551 58.3
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 1.3e-156 557.4 562 58.2
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 1.6e-154 550.4 554 56.5
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.5e-154 549.3 562 57.3
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 3.4e-149 532.7 560 56.1
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 7.5e-141 505.0 470 60.2
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 5.8e-133 478.8 390 64.4
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 9.8e-125 451.4 725 42.9
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 1.7e-116 424.1 501 47.9
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 3.8e-116 422.9 461 52.5
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 7.1e-115 418.7 385 61.0
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 2.1e-106 390.6 327 65.7
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 3.6e-103 379.8 562 40.9
unitig_736.g22938 Utricularia gibba HOM05D000361 ORTHO05D004243 4.5e-101 372.9 346 57.2
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 7.6e-101 372.1 569 40.2
Oeu041216.1 Olea europaea HOM05D000361 ORTHO05D004243 2.2e-100 370.5 457 48.6
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 5.1e-97 359.4 571 40.3
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 6.7e-97 359.0 543 41.4
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 9.3e-91 338.6 576 40.6
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.4e-83 314.7 343 53.9
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 3.2e-83 313.5 495 38.6
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 3.2e-83 313.5 276 62.7
Zm00001eb056500 Zea mays HOM05D000361 ORTHO05D004243 2.1e-79 300.8 280 59.6
DCAR_005760 Daucus carota HOM05D000361 ORTHO05D004243 1.0e-73 282.0 208 68.8
Cc02_g33820 Coffea canephora HOM05D000361 ORTHO05D004243 4.3e-72 276.6 227 67.0
Cc05_g04720 Coffea canephora HOM05D000361 ORTHO05D004243 2.4e-70 270.8 188 75.0
Ca_09209_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 2.6e-69 267.3 306 51.3
Cc04_g08620 Coffea canephora HOM05D000361 ORTHO05D004243 1.0e-68 265.4 202 68.8
Cc02_g26000 Coffea canephora HOM05D000361 ORTHO05D004243 5.0e-68 263.1 202 68.3
Lalb_Chr15g0078171 Lupinus albus HOM05D000361 ORTHO05D004243 9.4e-67 258.8 176 80.1
Cc11_g04100 Coffea canephora HOM05D000361 ORTHO05D004243 1.4e-65 255.0 188 72.9
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 6.9e-62 242.7 581 31.7
BcaC04g24029 Brassica carinata HOM05D000361 ORTHO05D004243 1.2e-61 241.9 230 61.7
SEGI_09541 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 3.9e-57 226.9 162 71.0
SHI15042 Sapria himalayana HOM05D000361 ORTHO05D004243 1.7e-55 221.5 783 26.4
CDE05G1119 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 2.2e-55 221.1 185 65.9
Cc03_g12210 Coffea canephora HOM05D000361 ORTHO05D004243 4.7e-42 176.8 126 69.0
COL.COLO4_26725 Corchorus olitorius HOM05D000361 ORTHO05D004243 3.0e-41 174.1 242 41.3
Actinidia04687 Actinidia chinensis HOM05D000361 ORTHO05D004243 4.0e-41 173.7 225 49.3
Actinidia27762 Actinidia chinensis HOM05D000361 ORTHO05D004243 4.0e-41 173.7 225 49.3
Dinv10095 Davidia involucrata HOM05D000361 ORTHO05D004243 1.5e-40 171.8 107 83.2
DCAR_005759 Daucus carota HOM05D000361 ORTHO05D004243 2.2e-39 167.9 221 44.3
CAN.G777.11 Capsicum annuum HOM05D000361 ORTHO05D004243 2.4e-38 164.5 183 55.2
Glyma.19G216151 Glycine max HOM05D000361 ORTHO05D004243 9.1e-38 162.5 124 75.8
Actinidia04728 Actinidia chinensis HOM05D000361 ORTHO05D004243 8.6e-36 156.0 225 46.7
Cc00_g34370 Coffea canephora HOM05D000361 ORTHO05D004243 2.0e-32 144.8 108 66.7
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 1.3e-28 132.1 215 36.7
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 1.2e-26 125.6 480 26.5
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 7.0e-22 109.8 118 50.8
Dinv10096 Davidia involucrata HOM05D000361 ORTHO05D004243 2.7e-21 107.8 55 90.9
PRCOL_00004542 Prasinoderma coloniale HOM05D000361 ORTHO05D004243 3.0e-20 104.4 253 28.1
Cc00_g34360 Coffea canephora HOM05D000361 ORTHO05D004243 7.3e-19 99.8 89 57.3
MCO10G287 Micromonas commoda HOM05D000361 ORTHO05D004243 4.1e-14 84.0 577 24.1
Hma1.2p1_0568F.1_g180240 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 3.5e-13 80.9 60 70.0
Hma1.2p1_0023F.1_g015020 Hydrangea macrophylla HOM05D002686 ORTHO05D004243 1.2e-10 72.4 72 50.0
unitig_736.g22937 Utricularia gibba HOM05D000361 ORTHO05D004243 4.7e-10 70.5 188 34.6
SEGI_20894 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 1.8e-09 68.6 123 37.4
Medtr7g109490 Medicago truncatula HOM05D000361 ORTHO05D004243 2.4e-06 58.2 58 50.0
TAR362G1176 Trochodendron aralioides HOM05D000361 ORTHO05D004243 3.2e-06 57.8 47 59.6


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