Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 0.0e+00 1292.7 644 100.0
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 3.6e-264 914.8 662 69.6
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 1.5e-257 892.9 652 68.4
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 1.6e-256 889.4 655 68.4
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.8e-256 888.6 662 68.6
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 6.2e-256 887.5 661 68.7
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 6.2e-256 887.5 662 68.3
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 2.3e-255 885.6 662 67.7
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 8.9e-255 883.6 664 67.9
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 4.4e-254 881.3 663 68.9
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 4.4e-254 881.3 664 67.3
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 4.4e-254 881.3 662 67.5
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 2.2e-253 879.0 664 66.9
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 7.1e-252 874.0 663 67.4
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 2.7e-251 872.1 663 67.0
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.7e-250 869.4 689 65.9
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 3.9e-250 868.2 667 66.6
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 5.1e-250 867.8 665 67.5
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 6.6e-250 867.5 699 64.7
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 1.3e-245 853.2 656 66.8
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.2e-245 852.4 681 65.5
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 6.4e-245 850.9 664 66.3
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 5.4e-244 847.8 681 65.2
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 1.2e-243 846.7 651 67.4
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 1.6e-243 846.3 666 65.2
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 6.0e-243 844.3 666 65.3
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 7.8e-243 844.0 664 66.6
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 4.3e-241 838.2 666 63.8
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 1.1e-239 833.6 663 65.6
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 3.8e-237 825.1 666 64.6
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.6e-235 819.7 663 64.9
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 2.1e-235 819.3 624 68.1
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 4.6e-235 818.1 661 62.6
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 4.6e-235 818.1 668 63.3
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 6.0e-235 817.8 663 64.7
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 1.3e-234 816.6 660 63.2
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 1.7e-234 816.2 662 64.0
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 2.3e-234 815.8 662 62.8
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 6.6e-234 814.3 654 64.4
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 8.7e-234 813.9 673 63.2
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 2.5e-233 812.4 658 64.0
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 7.3e-233 810.8 667 61.8
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 1.3e-232 810.1 652 64.3
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 2.1e-232 809.3 662 62.4
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 4.8e-232 808.1 662 63.6
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 2.4e-231 805.8 658 62.6
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 1.5e-230 803.1 661 63.1
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 2.6e-230 802.4 648 64.4
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 1.7e-229 799.7 646 63.8
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 1.7e-229 799.7 646 62.8
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 3.2e-228 795.4 661 61.9
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 4.2e-228 795.0 662 62.2
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 1.6e-227 793.1 688 60.8
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 2.1e-227 792.7 653 62.6
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 2.1e-227 792.7 654 61.3
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 4.6e-227 791.6 654 63.3
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 3.0e-226 788.9 655 61.8
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 5.1e-226 788.1 658 61.9
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 1.1e-225 786.9 663 62.4
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 1.5e-225 786.6 658 60.5
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 9.6e-225 783.9 661 61.3
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.6e-224 783.1 665 62.1
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 1.8e-223 779.6 648 62.3
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 1.2e-222 776.9 666 59.6
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 2.0e-222 776.2 656 61.7
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 2.6e-222 775.8 655 60.2
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 3.4e-222 775.4 661 59.6
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 5.8e-222 774.6 657 61.9
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 7.6e-222 774.2 654 61.2
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.3e-221 773.5 656 60.2
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 1.7e-221 773.1 676 59.5
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 4.9e-221 771.5 657 60.1
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 1.4e-220 770.0 651 61.0
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 1.4e-220 770.0 657 60.1
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 2.4e-220 769.2 656 60.1
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 4.6e-219 765.0 672 59.5
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 4.6e-219 765.0 672 59.5
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 7.9e-219 764.2 606 64.5
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 1.0e-218 763.8 653 60.8
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 1.8e-215 753.1 677 58.6
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 1.1e-212 743.8 700 56.9
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 9.7e-209 730.7 665 58.2
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 1.3e-205 720.3 665 56.5
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 8.8e-202 707.6 658 56.5
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 6.9e-199 698.0 658 55.8
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 4.7e-195 685.3 663 55.5
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 8.0e-187 657.9 474 69.4
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 7.7e-182 641.3 494 65.6
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 3.6e-179 632.5 611 55.6
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 7.0e-175 618.2 568 57.2
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 1.4e-170 604.0 643 50.4
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 2.6e-169 599.7 663 51.1
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 8.9e-162 574.7 644 48.9
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 3.1e-159 566.2 634 49.8
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 4.7e-147 525.8 506 54.7
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 6.2e-147 525.4 376 68.9
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 5.2e-138 495.7 445 57.3
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 3.4e-129 466.5 345 67.8
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 9.2e-127 458.4 349 66.8
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 2.1e-118 430.6 471 49.0
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 1.5e-113 414.5 427 52.7
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 2.7e-78 297.4 209 70.3
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 2.8e-67 260.8 252 55.6
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 5.0e-56 223.4 169 67.5
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 9.4e-55 219.2 209 55.5
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 1.8e-53 214.9 183 56.3
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 2.0e-52 211.5 148 73.6
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 7.2e-47 193.0 144 68.1
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 1.0e-45 189.1 140 65.0
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 6.8e-45 186.4 171 53.8
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 2.1e-38 164.9 181 54.7
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 4.4e-28 130.6 104 62.5
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 1.5e-23 115.5 77 67.5
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 3.3e-23 114.4 64 81.2
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 2.1e-22 111.7 63 81.0
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 1.2e-20 105.9 106 52.8


User provided reference genes

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