Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc18.20 Carica papaya HOM05D004395 ORTHO05D005234 2.4e-34 148.3 74 100.0
Ciclev10022218m.g Citrus clementina HOM05D004395 ORTHO05D005234 1.2e-30 136.0 74 87.8
TWI18G0814 Tripterygium wilfordii HOM05D004395 ORTHO05D005234 2.1e-30 135.2 74 86.5
COL.COLO4_23252 Corchorus olitorius HOM05D004395 ORTHO05D005234 2.7e-30 134.8 74 87.8
Cfa005822 Carpinus fangiana HOM05D004395 ORTHO05D005234 3.5e-30 134.4 74 87.8
Potri.002G197800 Populus trichocarpa HOM05D004395 ORTHO05D005234 4.6e-30 134.0 74 86.5
Atru.chr5.1037 Acer truncatum HOM05D004395 ORTHO05D005234 6.0e-30 133.7 74 86.5
TWI75G0438 Tripterygium wilfordii HOM05D004395 ORTHO05D005234 6.0e-30 133.7 74 85.1
TAR365G0011 Trochodendron aralioides HOM05D004395 ORTHO05D005234 6.0e-30 133.7 74 86.5
RcHm_v2.0_Chr7g0241771 Rosa chinensis HOM05D004395 ORTHO05D005234 1.0e-29 132.9 74 85.1
DCAR_002879 Daucus carota HOM05D004395 ORTHO05D005234 1.3e-29 132.5 74 86.5
ECA236G4761 Erigeron canadensis HOM05D004395 ORTHO05D005234 1.3e-29 132.5 74 85.1
MBI18_g28456_MAGBIO Magnolia biondii HOM05D004395 ORTHO05D005234 1.7e-29 132.1 74 86.5
Thecc.01G311200 Theobroma cacao HOM05D004395 ORTHO05D005234 1.7e-29 132.1 74 85.1
CANSAT25G2014 Cannabis sativa HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 85.1
ClCG09G005210 Citrullus lanatus HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 85.1
Duzib138G1253 Durio zibethinus HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 83.8
HanXRQChr06g0167821 Helianthus annuus HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 86.5
Lsat_1_v5_gn_8_166540 Lactuca sativa HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 85.1
Manes.01G226500 Manihot esculenta HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 85.1
Prupe.8G270400 Prunus persica HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 85.1
PGR044G2039 Punica granatum HOM05D004395 ORTHO05D005234 2.3e-29 131.7 74 83.8
Dinv33105 Davidia involucrata HOM05D004395 ORTHO05D005234 3.0e-29 131.3 72 86.1
Hund09618 Selenicereus undatus HOM05D004395 ORTHO05D005234 3.0e-29 131.3 74 82.4
MELO3C015935.2 Cucumis melo HOM05D004395 ORTHO05D005234 3.9e-29 131.0 74 83.8
Eucgr.K03534 Eucalyptus grandis HOM05D004395 ORTHO05D005234 3.9e-29 131.0 74 85.1
PSO210G6304 Papaver somniferum HOM05D004395 ORTHO05D005234 5.1e-29 130.6 74 81.1
PSO761G0048 Papaver somniferum HOM05D004395 ORTHO05D005234 5.1e-29 130.6 74 81.1
Gohir.A11G110300 Gossypium hirsutum HOM05D004395 ORTHO05D005234 6.6e-29 130.2 74 83.8
Lj2A1204T57 Lonicera japonica HOM05D004395 ORTHO05D005234 6.6e-29 130.2 74 83.8
Actinidia25840 Actinidia chinensis HOM05D004395 ORTHO05D005234 8.7e-29 129.8 74 83.8
arahy.Tifrunner.gnm1.ann1.NCI439 Arachis hypogaea HOM05D004395 ORTHO05D005234 8.7e-29 129.8 74 83.8
arahy.Tifrunner.gnm1.ann1.TUT6I7 Arachis hypogaea HOM05D004395 ORTHO05D005234 8.7e-29 129.8 74 83.8
Sed0020172 Sechium edule HOM05D004395 ORTHO05D005234 8.7e-29 129.8 74 82.4
Eucgr.K03533 Eucalyptus grandis HOM05D004395 ORTHO05D005234 1.1e-28 129.4 74 83.8
FAN08G2141 Fragaria x ananassa HOM05D004395 ORTHO05D005234 1.1e-28 129.4 74 81.1
FAN18G1082 Fragaria x ananassa HOM05D004395 ORTHO05D005234 1.1e-28 129.4 74 81.1
QL01p046128 Quercus lobata HOM05D004395 ORTHO05D005234 1.1e-28 129.4 71 85.9
SalBow3G3242 Salvia bowleyana HOM05D004395 ORTHO05D005234 1.1e-28 129.4 74 82.4
GSVIVG01028100001 Vitis vinifera HOM05D004395 ORTHO05D005234 1.1e-28 129.4 74 86.5
Aa31LG10G16400 Aethionema arabicum HOM05D004395 ORTHO05D005234 1.5e-28 129.0 74 83.8
ATR0706G165 Amborella trichopoda HOM05D004395 ORTHO05D005234 1.5e-28 129.0 74 83.8
AUR62024674 Chenopodium quinoa HOM05D004395 ORTHO05D005234 1.5e-28 129.0 74 81.1
MD03G1296800 Malus domestica HOM05D004395 ORTHO05D005234 1.5e-28 129.0 74 82.4
CSS0011400 Camellia sinensis var. sinensis HOM05D004395 ORTHO05D005234 1.9e-28 128.6 74 82.4
CSS0015284 Camellia sinensis var. sinensis HOM05D004395 ORTHO05D005234 1.9e-28 128.6 74 82.4
Lalb_Chr21g0309501 Lupinus albus HOM05D004395 ORTHO05D005234 1.9e-28 128.6 74 83.8
Manes.05G002300 Manihot esculenta HOM05D004395 ORTHO05D005234 1.9e-28 128.6 72 81.9
Nitab4.5_0000906g0030 Nicotiana tabacum HOM05D004395 ORTHO05D005234 1.9e-28 128.6 74 81.1
CAN.G362.41 Capsicum annuum HOM05D004395 ORTHO05D005234 2.5e-28 128.3 74 81.1
FAN04G0288 Fragaria x ananassa HOM05D004395 ORTHO05D005234 2.5e-28 128.3 74 79.7
Lalb_Chr02g0146721 Lupinus albus HOM05D004395 ORTHO05D005234 3.3e-28 127.9 74 82.4
FAN13G1316 Fragaria x ananassa HOM05D004395 ORTHO05D005234 4.3e-28 127.5 74 79.7
Nitab4.5_0001301g0120 Nicotiana tabacum HOM05D004395 ORTHO05D005234 4.3e-28 127.5 74 79.7
unitig_0.g274 Utricularia gibba HOM05D004395 ORTHO05D005234 4.3e-28 127.5 74 82.4
Aqoxy2G02790 Aquilegia oxysepala HOM05D004395 ORTHO05D005234 5.6e-28 127.1 74 79.7
AUR62011832 Chenopodium quinoa HOM05D004395 ORTHO05D005234 5.6e-28 127.1 74 79.7
Glyma.10G014200 Glycine max HOM05D004395 ORTHO05D005234 5.6e-28 127.1 74 82.4
Lj5g0013155 Lotus japonicus HOM05D004395 ORTHO05D005234 5.6e-28 127.1 74 79.7
Solyc01g079590.3 Solanum lycopersicum HOM05D004395 ORTHO05D005234 5.6e-28 127.1 74 79.7
Sopen01g031370 Solanum pennellii HOM05D004395 ORTHO05D005234 5.6e-28 127.1 74 79.7
TPR.G19763 Trifolium pratense HOM05D004395 ORTHO05D005234 5.6e-28 127.1 74 82.4
Rhsim01G0289900 Rhododendron simsii HOM05D004395 ORTHO05D005234 7.3e-28 126.7 74 81.1
Cc01_g21280 Coffea canephora HOM05D004395 ORTHO05D005234 9.6e-28 126.3 74 79.7
Peaxi162Scf00001g10221 Petunia axillaris HOM05D004395 ORTHO05D005234 9.6e-28 126.3 74 79.7
THA.LOC104800347 Tarenaya hassleriana HOM05D004395 ORTHO05D005234 9.6e-28 126.3 74 82.4
THA.LOC104827672 Tarenaya hassleriana HOM05D004395 ORTHO05D005234 9.6e-28 126.3 74 82.4
vmacro15119 Vaccinium macrocarpon HOM05D004395 ORTHO05D005234 9.6e-28 126.3 74 79.7
CiPaw.07G115900 Carya illinoinensis HOM05D004395 ORTHO05D005234 1.3e-27 125.9 74 81.1
MD11G1316400 Malus domestica HOM05D004395 ORTHO05D005234 1.3e-27 125.9 74 82.4
AL5G45330 Arabidopsis lyrata HOM05D004395 ORTHO05D005234 1.6e-27 125.6 74 81.1
Carub.0005s2924 Capsella rubella HOM05D004395 ORTHO05D005234 1.6e-27 125.6 74 81.1
PGSC0003DMG400009034 Solanum tuberosum HOM05D004395 ORTHO05D005234 1.6e-27 125.6 74 78.4
CARHR172840 Cardamine hirsuta HOM05D004395 ORTHO05D005234 2.1e-27 125.2 74 81.1
CDE02G0047 Ceratophyllum demersum HOM05D004395 ORTHO05D005234 2.1e-27 125.2 74 78.4
Phvul.007G215400 Phaseolus vulgaris HOM05D004395 ORTHO05D005234 2.1e-27 125.2 74 81.1
AT3G62580 Arabidopsis thaliana HOM05D004395 ORTHO05D005234 2.8e-27 124.8 72 83.3
Migut.D00093 Erythranthe guttata HOM05D004395 ORTHO05D005234 2.8e-27 124.8 74 79.7
Sc17g0000530 Simmondsia chinensis HOM05D004395 ORTHO05D005234 2.8e-27 124.8 74 78.4
Psat6g162440 Pisum sativum HOM05D004395 ORTHO05D005234 3.6e-27 124.4 74 79.7
Sp5g00920 Schrenkiella parvula HOM05D004395 ORTHO05D005234 3.6e-27 124.4 72 83.3
THA.LOC104817465 Tarenaya hassleriana HOM05D004395 ORTHO05D005234 3.6e-27 124.4 74 81.1
unitig_60.g25658 Utricularia gibba HOM05D004395 ORTHO05D005234 3.6e-27 124.4 74 79.7
Ca_30262_v3 Cicer arietinum L. HOM05D004395 ORTHO05D005234 4.8e-27 124.0 74 79.7
Dinv10080 Davidia involucrata HOM05D004395 ORTHO05D005234 4.8e-27 124.0 72 83.3
Oeu008460.1 Olea europaea HOM05D004395 ORTHO05D005234 4.8e-27 124.0 74 81.1
Ah.02g112150 Amaranthus hybridus HOM05D004395 ORTHO05D005234 6.2e-27 123.6 74 78.4
BcaC07g40733 Brassica carinata HOM05D004395 ORTHO05D005234 6.2e-27 123.6 72 81.9
BcaC07g42768 Brassica carinata HOM05D004395 ORTHO05D005234 6.2e-27 123.6 72 81.9
A09p54450 Brassica napus HOM05D004395 ORTHO05D005234 6.2e-27 123.6 72 81.9
C08p37340 Brassica napus HOM05D004395 ORTHO05D005234 6.2e-27 123.6 72 81.9
BolC8t51312H Brassica oleracea HOM05D004395 ORTHO05D005234 6.2e-27 123.6 72 81.9
BraA09t40858Z Brassica rapa HOM05D004395 ORTHO05D005234 6.2e-27 123.6 72 81.9
Thhalv10006236m.g Eutrema salsugineum HOM05D004395 ORTHO05D005234 8.1e-27 123.2 72 81.9
VMungo0720G1854 Vigna mungo HOM05D004395 ORTHO05D005234 8.1e-27 123.2 74 79.7
Gorai.007G123500 Gossypium raimondii HOM05D004395 ORTHO05D005234 1.1e-26 122.9 69 84.1
Medtr1g087320 Medicago truncatula HOM05D004395 ORTHO05D005234 1.4e-26 122.5 74 78.4
Nn3g21647 Nelumbo nucifera HOM05D004395 ORTHO05D005234 1.8e-26 122.1 68 85.3
FvH4_5g39460 Fragaria vesca HOM05D004395 ORTHO05D005234 2.4e-26 121.7 68 82.4
Zm00001eb028370 Zea mays HOM05D004395 ORTHO05D005234 2.4e-26 121.7 74 77.0
Zm00001eb137060 Zea mays HOM05D004395 ORTHO05D005234 2.4e-26 121.7 74 77.0
CsaV3_7G029860 Cucumis sativus L. HOM05D004395 ORTHO05D005234 3.1e-26 121.3 68 83.8
Oeu047386.1 Olea europaea HOM05D004395 ORTHO05D005234 3.1e-26 121.3 73 80.8
MSTRG.21675 Avicennia marina HOM05D004395 ORTHO05D005234 5.3e-26 120.6 74 78.4
Gohir.D11G115400 Gossypium hirsutum HOM05D004395 ORTHO05D005234 5.3e-26 120.6 68 83.8
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 9.0e-26 119.8 68 83.8
Gorai.004G143800 Gossypium raimondii HOM05D004395 ORTHO05D005234 3.4e-25 117.9 74 77.0
Os12g0557400 Oryza sativa ssp. japonica HOM05D004395 ORTHO05D005234 3.4e-25 117.9 74 74.3
CDE09G1198 Ceratophyllum demersum HOM05D004395 ORTHO05D005234 4.4e-25 117.5 74 74.3
Gohir.A08G119000 Gossypium hirsutum HOM05D004395 ORTHO05D005234 1.3e-24 115.9 74 77.0
Dinv33106 Davidia involucrata HOM05D004395 ORTHO05D005234 2.2e-24 115.2 66 80.3
TAR633G1754 Trochodendron aralioides HOM05D004395 ORTHO05D005234 6.4e-24 113.6 68 80.9
TAR633G1975 Trochodendron aralioides HOM05D004395 ORTHO05D005234 6.4e-24 113.6 68 80.9
Sabra02G0159800 Salix brachista HOM05D004395 ORTHO05D005234 1.1e-23 112.8 68 80.9
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 1.1e-23 112.8 65 80.0
Os11g0673100 Oryza sativa ssp. japonica HOM05D004395 ORTHO05D005234 1.9e-23 112.1 73 72.6
AagrBONN_evm.TU.Sc2ySwM_344.4364 Anthoceros agrestis HOM05D004395 ORTHO05D005234 3.2e-23 111.3 74 68.9
Sc17g0000520 Simmondsia chinensis HOM05D004395 ORTHO05D005234 2.7e-22 108.2 72 69.4
SMO367G0059 Selaginella moellendorffii HOM05D004395 ORTHO05D005234 3.5e-22 107.8 74 67.6
Sc05g0000520 Simmondsia chinensis HOM05D004395 ORTHO05D005234 1.3e-21 105.9 74 67.6
Haze_05024 Corylus avellana HOM05D004395 ORTHO05D005234 1.5e-20 102.4 74 68.9
SEGI_05878 Sequoiadendron giganteum HOM05D004395 ORTHO05D005234 5.6e-20 100.5 67 71.6
Haze_05020 Corylus avellana HOM05D004395 ORTHO05D005234 2.1e-19 98.6 69 68.1
TPR.G7051 Trifolium pratense HOM05D004395 ORTHO05D005234 2.1e-19 98.6 57 80.7
Pp3c20_10750 Physcomitrium patens HOM05D004395 ORTHO05D005234 4.8e-19 97.4 74 60.8
Haze_05023 Corylus avellana HOM05D004395 ORTHO05D005234 6.2e-19 97.1 69 68.1
Oeu009086.1 Olea europaea HOM05D004395 ORTHO05D005234 5.3e-18 94.0 65 70.8
Eucgr.K03536 Eucalyptus grandis HOM05D004395 ORTHO05D005234 9.0e-18 93.2 74 66.2
CBR_g50787 Chara braunii HOM05D004395 ORTHO05D005234 3.4e-17 91.3 73 54.8
MBI18_g28451_MAGBIO Magnolia biondii HOM05D004395 ORTHO05D005234 1.5e-12 75.9 61 57.4
RcHm_v2.0_Chr7g0229621 Rosa chinensis HOM05D004395 ORTHO05D005234 2.5e-12 75.1 42 90.5
Cfa005821 Carpinus fangiana HOM05D004395 ORTHO05D005234 1.6e-11 72.4 77 54.5
Mapoly0073s0092 Marchantia polymorpha HOM05D004395 ORTHO05D005234 2.1e-11 72.0 73 47.9
Ca_10293_v3 Cicer arietinum L. HOM05D004395 ORTHO05D005234 6.2e-11 70.5 45 71.1


User provided reference genes

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