Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc18.120 Carica papaya HOM05D002646 ORTHO05D002782 2.8e-29 133.3 264 100.0
GSVIVG01027622001 Vitis vinifera HOM05D002646 ORTHO05D002782 5.5e-17 92.4 55 81.8
Duzib268G0058 Durio zibethinus HOM05D002646 ORTHO05D002782 9.3e-17 91.7 54 79.6
Duzib268G0077 Durio zibethinus HOM05D002646 ORTHO05D002782 9.3e-17 91.7 54 79.6
COL.COLO4_12558 Corchorus olitorius HOM05D002646 ORTHO05D002782 2.1e-16 90.5 54 77.8
Dinv29528 Davidia involucrata HOM05D002646 ORTHO05D002782 3.5e-16 89.7 53 83.0
FAN01G3025 Fragaria x ananassa HOM05D002646 ORTHO05D002782 3.5e-16 89.7 55 74.5
FvH4_7g12010 Fragaria vesca HOM05D002646 ORTHO05D002782 4.6e-16 89.4 55 72.7
FAN03G1830 Fragaria x ananassa HOM05D002646 ORTHO05D002782 4.6e-16 89.4 55 72.7
FAN06G0179 Fragaria x ananassa HOM05D002646 ORTHO05D002782 4.6e-16 89.4 55 72.7
FAN06G4772 Fragaria x ananassa HOM05D002646 ORTHO05D002782 4.6e-16 89.4 55 72.7
FAN10G4284 Fragaria x ananassa HOM05D002646 ORTHO05D002782 4.6e-16 89.4 55 72.7
CSS0036552 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 7.9e-16 88.6 53 81.1
RcHm_v2.0_Chr1g0350721 Rosa chinensis HOM05D002646 ORTHO05D002782 7.9e-16 88.6 55 74.5
Duzib268G1615 Durio zibethinus HOM05D002646 ORTHO05D002782 1.0e-15 88.2 54 77.8
Ciclev10020287m.g Citrus clementina HOM05D002646 ORTHO05D002782 1.3e-15 87.8 54 75.9
Eucgr.G00320 Eucalyptus grandis HOM05D002646 ORTHO05D002782 1.3e-15 87.8 53 75.5
FAN10G1248 Fragaria x ananassa HOM05D002646 ORTHO05D002782 1.3e-15 87.8 55 70.9
Thecc.01G375100 Theobroma cacao HOM05D002646 ORTHO05D002782 1.3e-15 87.8 54 75.9
TWI23G1057 Tripterygium wilfordii HOM05D002646 ORTHO05D002782 1.8e-15 87.4 55 72.7
Atru.chr5.320 Acer truncatum HOM05D002646 ORTHO05D002782 2.3e-15 87.0 55 74.5
CSS0029682 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 2.3e-15 87.0 52 80.8
Gohir.A08G133800 Gossypium hirsutum HOM05D002646 ORTHO05D002782 2.3e-15 87.0 54 75.9
Gorai.004G161000 Gossypium raimondii HOM05D002646 ORTHO05D002782 2.3e-15 87.0 54 75.9
Lj9A571T76 Lonicera japonica HOM05D002646 ORTHO05D002782 2.3e-15 87.0 54 77.8
MD08G1028000 Malus domestica HOM05D002646 ORTHO05D002782 2.3e-15 87.0 55 76.4
Gohir.D08G155000 Gossypium hirsutum HOM05D002646 ORTHO05D002782 3.0e-15 86.7 54 74.1
Aa31LG1G11300 Aethionema arabicum HOM05D002646 ORTHO05D002782 5.1e-15 85.9 55 74.5
Rhsim08G0118000 Rhododendron simsii HOM05D002646 ORTHO05D002782 6.7e-15 85.5 55 76.4
RhsimUnG0099800 Rhododendron simsii HOM05D002646 ORTHO05D002782 6.7e-15 85.5 55 76.4
vmacro13392 Vaccinium macrocarpon HOM05D002646 ORTHO05D002782 6.7e-15 85.5 55 78.2
Oeu003485.1 Olea europaea HOM05D002646 ORTHO05D002782 1.1e-14 84.7 52 76.9
Sc19g0004610 Simmondsia chinensis HOM05D002646 ORTHO05D002782 1.1e-14 84.7 52 75.0
TAR374G0079 Trochodendron aralioides HOM05D002646 ORTHO05D002782 1.1e-14 84.7 54 72.2
ECA236G2773 Erigeron canadensis HOM05D002646 ORTHO05D002782 2.5e-14 83.6 53 73.6
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.5e-14 83.6 53 73.6
HanXRQChr04g0122351 Helianthus annuus HOM05D002646 ORTHO05D002782 2.5e-14 83.6 54 72.2
arahy.Tifrunner.gnm1.ann1.HKT7FP Arachis hypogaea HOM05D002646 ORTHO05D002782 3.3e-14 83.2 55 72.7
Manes.01G265200 Manihot esculenta HOM05D002646 ORTHO05D002782 4.3e-14 82.8 54 68.5
QL12p017558 Quercus lobata HOM05D002646 ORTHO05D002782 4.3e-14 82.8 54 72.2
CiPaw.01G261200 Carya illinoinensis HOM05D002646 ORTHO05D002782 5.7e-14 82.4 53 75.5
Thhalv10007755m.g Eutrema salsugineum HOM05D002646 ORTHO05D002782 5.7e-14 82.4 55 69.1
THA.LOC104817013 Tarenaya hassleriana HOM05D002646 ORTHO05D002782 5.7e-14 82.4 55 70.9
BcaNung05290 Brassica carinata HOM05D002646 ORTHO05D002782 7.4e-14 82.0 55 67.3
C05p00160 Brassica napus HOM05D002646 ORTHO05D002782 7.4e-14 82.0 55 67.3
BolC5t28806H Brassica oleracea HOM05D002646 ORTHO05D002782 7.4e-14 82.0 55 67.3
Actinidia31415 Actinidia chinensis HOM05D002646 ORTHO05D002782 9.6e-14 81.6 55 74.5
BraA10t42295Z Brassica rapa HOM05D002646 ORTHO05D002782 9.6e-14 81.6 55 67.3
Prupe.2G146700 Prunus persica HOM05D002646 ORTHO05D002782 1.3e-13 81.3 55 70.9
arahy.Tifrunner.gnm1.ann1.7IJL1I Arachis hypogaea HOM05D002646 ORTHO05D002782 2.1e-13 80.5 55 70.9
AT1G01970 Arabidopsis thaliana HOM05D002646 ORTHO05D002782 2.8e-13 80.1 55 65.5
Lalb_Chr03g0039441 Lupinus albus HOM05D002646 ORTHO05D002782 2.8e-13 80.1 53 69.8
AL1G10350 Arabidopsis lyrata HOM05D002646 ORTHO05D002782 3.7e-13 79.7 54 66.7
Ca_07824_v3 Cicer arietinum L. HOM05D002646 ORTHO05D002782 3.7e-13 79.7 54 66.7
Haze_16825 Corylus avellana HOM05D002646 ORTHO05D002782 3.7e-13 79.7 53 71.7
CsaV3_3G009620 Cucumis sativus L. HOM05D002646 ORTHO05D002782 3.7e-13 79.7 53 66.0
CARHR000380 Cardamine hirsuta HOM05D002646 ORTHO05D002782 4.8e-13 79.3 55 65.5
Medtr7g075010 Medicago truncatula HOM05D002646 ORTHO05D002782 4.8e-13 79.3 54 66.7
Peaxi162Scf00021g01520 Petunia axillaris HOM05D002646 ORTHO05D002782 4.8e-13 79.3 55 67.3
EL10Ac2g03761 Beta vulgaris HOM05D002646 ORTHO05D002782 6.3e-13 79.0 52 71.2
Cc02_g36600 Coffea canephora HOM05D002646 ORTHO05D002782 6.3e-13 79.0 54 70.4
Nitab4.5_0000457g0400 Nicotiana tabacum HOM05D002646 ORTHO05D002782 6.3e-13 79.0 54 68.5
Sp1g00330 Schrenkiella parvula HOM05D002646 ORTHO05D002782 6.3e-13 79.0 55 65.5
MELO3C006182.2 Cucumis melo HOM05D002646 ORTHO05D002782 8.2e-13 78.6 54 66.7
Lj1g0023852 Lotus japonicus HOM05D002646 ORTHO05D002782 8.2e-13 78.6 54 68.5
MBI04_g32239_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 8.2e-13 78.6 52 73.1
BcaB03g13627 Brassica carinata HOM05D002646 ORTHO05D002782 1.1e-12 78.2 55 63.6
Phvul.008G076800 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 1.1e-12 78.2 54 68.5
TPR.G26954 Trifolium pratense HOM05D002646 ORTHO05D002782 1.1e-12 78.2 54 64.8
A10p00160 Brassica napus HOM05D002646 ORTHO05D002782 1.4e-12 77.8 55 63.6
AUR62030050 Chenopodium quinoa HOM05D002646 ORTHO05D002782 1.8e-12 77.4 54 64.8
Lsat_1_v5_gn_7_7441 Lactuca sativa HOM05D002646 ORTHO05D002782 1.8e-12 77.4 53 67.9
MSTRG.13432 Avicennia marina HOM05D002646 ORTHO05D002782 2.4e-12 77.0 53 66.0
Migut.E00070 Erythranthe guttata HOM05D002646 ORTHO05D002782 2.4e-12 77.0 55 65.5
Ah.13g074290 Amaranthus hybridus HOM05D002646 ORTHO05D002782 3.1e-12 76.6 54 66.7
CANSAT11G0871 Cannabis sativa HOM05D002646 ORTHO05D002782 3.1e-12 76.6 54 64.8
Carub.0001s0027 Capsella rubella HOM05D002646 ORTHO05D002782 4.1e-12 76.3 55 67.3
Psat3g115520 Pisum sativum HOM05D002646 ORTHO05D002782 4.1e-12 76.3 54 64.8
ClCG05G002180 Citrullus lanatus HOM05D002646 ORTHO05D002782 5.3e-12 75.9 54 63.0
Nn4g26422 Nelumbo nucifera HOM05D002646 ORTHO05D002782 5.3e-12 75.9 53 69.8
Hund22797 Selenicereus undatus HOM05D002646 ORTHO05D002782 9.0e-12 75.1 54 68.5
Phvul.008G083500 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 1.2e-11 74.7 50 70.0
Zm00001eb329950 Zea mays HOM05D002646 ORTHO05D002782 2.6e-11 73.6 53 67.9
Glyma.18G221100 Glycine max HOM05D002646 ORTHO05D002782 4.5e-11 72.8 50 70.0
PSO782G0929 Papaver somniferum HOM05D002646 ORTHO05D002782 4.5e-11 72.8 52 69.2
Actinidia12264 Actinidia chinensis HOM05D002646 ORTHO05D002782 1.0e-10 71.6 45 77.8
SGA_v2.0_scaffold63G21638 Striga asiatica HOM05D002646 ORTHO05D002782 1.0e-10 71.6 53 62.3
Glyma.09G268500 Glycine max HOM05D002646 ORTHO05D002782 1.3e-10 71.2 55 65.5
Nn4g23787 Nelumbo nucifera HOM05D002646 ORTHO05D002782 1.3e-10 71.2 53 67.9
Nitab4.5_0002993g0040 Nicotiana tabacum HOM05D002646 ORTHO05D002782 1.3e-10 71.2 53 64.2
AUR62002634 Chenopodium quinoa HOM05D002646 ORTHO05D002782 1.7e-10 70.9 54 59.3
Sed0003475 Sechium edule HOM05D002646 ORTHO05D002782 5.0e-10 69.3 54 59.3
PSO478G1528 Papaver somniferum HOM05D002646 ORTHO05D002782 6.5e-10 68.9 51 66.7
Aqoxy7G00603 Aquilegia oxysepala HOM05D002646 ORTHO05D002782 1.4e-09 67.8 52 57.7
Os07g0661900 Oryza sativa ssp. japonica HOM05D002646 ORTHO05D002782 1.9e-09 67.4 52 63.5
ATR0697G028 Amborella trichopoda HOM05D002646 ORTHO05D002782 2.5e-09 67.0 52 61.5
SEGI_27493 Sequoiadendron giganteum HOM05D002646 ORTHO05D002782 9.3e-09 65.1 49 57.1
HPP92_001656 Vanilla planifolia HOM05D002646 ORTHO05D002782 1.6e-08 64.3 52 61.5
PGR042G3460 Punica granatum HOM05D002646 ORTHO05D002782 1.0e-07 61.6 42 66.7
CDE11G0049 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 1.3e-07 61.2 52 59.6
Sabra14G0050200 Salix brachista HOM05D002646 ORTHO05D002782 3.9e-07 59.7 42 64.3
DCAR_006871 Daucus carota HOM05D002646 ORTHO05D002782 5.1e-07 59.3 42 66.7
Potri.014G070500 Populus trichocarpa HOM05D002646 ORTHO05D002782 5.1e-07 59.3 38 73.7
CsaV3_2G028870 Cucumis sativus L. HOM05D002646 ORTHO05D002782 1.1e-06 58.2 52 50.0
Cfa018170 Carpinus fangiana HOM05D002646 ORTHO05D002782 1.5e-06 57.8 54 48.1
Haze_17945 Corylus avellana HOM05D002646 ORTHO05D002782 1.5e-06 57.8 54 48.1
DCAR_019536 Daucus carota HOM05D002646 ORTHO05D002782 1.9e-06 57.4 54 50.0
SGA_v2.0_scaffold201G41411 Striga asiatica HOM05D002646 ORTHO05D002782 3.3e-06 56.6 54 48.1
CSS0007142 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 4.3e-06 56.2 54 48.1
Actinidia15339 Actinidia chinensis HOM05D002646 ORTHO05D002782 5.7e-06 55.8 52 48.1
Gohir.A06G009600 Gossypium hirsutum HOM05D002646 ORTHO05D002782 5.7e-06 55.8 52 50.0
Gorai.010G009700 Gossypium raimondii HOM05D002646 ORTHO05D002782 5.7e-06 55.8 52 50.0
Gohir.D06G005550 Gossypium hirsutum HOM05D002646 ORTHO05D002782 7.4e-06 55.5 52 48.1
Ciclev10000434m.g Citrus clementina HOM05D002646 ORTHO05D002782 9.7e-06 55.1 54 50.0
Mapoly0114s0040 Marchantia polymorpha HOM05D002646 ORTHO05D002782 9.7e-06 55.1 54 50.0


User provided reference genes

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