Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc179.6 Carica papaya HOM05D003845 ORTHO05D004161 7.8e-135 483.8 244 100.0
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 3.1e-43 179.5 146 65.1
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 1.2e-42 177.6 151 62.3
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 7.7e-42 174.9 147 61.2
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 1.0e-41 174.5 140 65.0
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 1.3e-41 174.1 143 62.9
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 1.7e-41 173.7 148 64.2
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.9e-41 172.9 151 60.3
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 5.0e-41 172.2 146 65.1
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 5.0e-41 172.2 146 65.1
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 5.0e-41 172.2 142 63.4
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 6.6e-41 171.8 147 59.9
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 6.6e-41 171.8 147 59.9
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.1e-40 171.0 148 61.5
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 1.5e-40 170.6 147 60.5
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 1.5e-40 170.6 147 60.5
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.5e-40 170.6 147 60.5
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 1.9e-40 170.2 146 64.4
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 2.5e-40 169.9 139 65.5
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 3.3e-40 169.5 139 64.7
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 3.3e-40 169.5 147 61.9
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 4.2e-40 169.1 139 64.7
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 5.5e-40 168.7 147 59.9
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 7.2e-40 168.3 147 60.5
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 7.2e-40 168.3 150 59.3
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 2.8e-39 166.4 147 59.2
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 2.8e-39 166.4 139 64.0
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 3.6e-39 166.0 142 62.7
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 8.0e-39 164.9 139 64.0
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 8.0e-39 164.9 147 60.5
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 1.4e-38 164.1 147 61.9
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.8e-38 163.7 147 58.5
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 2.3e-38 163.3 143 60.8
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 2.3e-38 163.3 143 59.4
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 4.0e-38 162.5 143 61.5
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 5.2e-38 162.2 139 63.3
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 5.2e-38 162.2 142 62.0
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 6.8e-38 161.8 149 58.4
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 6.8e-38 161.8 143 61.5
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 6.8e-38 161.8 143 62.2
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 8.9e-38 161.4 143 60.8
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 8.9e-38 161.4 151 58.3
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 8.9e-38 161.4 139 61.9
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 1.2e-37 161.0 143 61.5
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 3.4e-37 159.5 140 63.6
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 4.4e-37 159.1 139 61.9
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 4.4e-37 159.1 150 58.0
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 7.5e-37 158.3 150 56.7
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 9.8e-37 157.9 148 60.1
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 1.3e-36 157.5 148 58.8
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 1.7e-36 157.1 149 59.7
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 2.8e-36 156.4 149 58.4
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 6.3e-36 155.2 148 59.5
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 8.3e-36 154.8 179 49.7
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 8.3e-36 154.8 159 51.6
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.4e-35 154.1 149 59.7
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 4.1e-35 152.5 148 59.5
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 4.1e-35 152.5 146 56.8
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 7.0e-35 151.8 147 56.5
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.2e-34 151.0 149 54.4
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.2e-34 151.0 149 54.4
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 1.6e-34 150.6 149 53.7
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.7e-34 149.8 148 56.8
COL.COLO4_05467 Corchorus olitorius HOM05D003845 ORTHO05D004161 2.7e-34 149.8 148 54.1
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 2.7e-34 149.8 148 58.8
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.5e-34 149.4 148 55.4
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 7.8e-34 148.3 147 57.1
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 1.0e-33 147.9 148 54.7
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 1.7e-33 147.1 148 55.4
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 2.9e-33 146.4 147 56.5
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 2.9e-33 146.4 149 52.3
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 5.0e-33 145.6 101 74.3
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 1.1e-32 144.4 149 53.7
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 1.5e-32 144.1 146 54.1
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 2.5e-32 143.3 149 52.3
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 2.1e-31 140.2 140 55.7
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 3.6e-31 139.4 149 53.7
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 1.4e-30 137.5 147 52.4
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 1.8e-30 137.1 132 54.5
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 5.2e-30 135.6 145 53.8
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 5.8e-29 132.1 149 49.0
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 9.8e-29 131.3 147 49.0
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.3e-28 131.0 155 51.0
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 3.7e-28 129.4 140 54.3
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 3.2e-27 126.3 167 47.3
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 3.2e-27 126.3 128 54.7
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 1.9e-24 117.1 152 45.4
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.9e-24 117.1 157 45.9
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 5.6e-24 115.5 84 63.1
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 4.7e-23 112.5 149 44.3
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 8.3e-20 101.7 121 47.1
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 2.1e-18 97.1 164 37.2
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 7.8e-18 95.1 91 51.6
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 1.0e-17 94.7 111 45.0
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 1.3e-17 94.4 74 70.3
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 2.3e-17 93.6 132 41.7
CSS0040864 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 7.5e-13 78.6 57 68.4
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 3.5e-10 69.7 76 47.4
Hund29189 Selenicereus undatus HOM05D008000 ORTHO05D000006 4.0e-06 56.2 77 45.5
Hund29191 Selenicereus undatus HOM05D008000 ORTHO05D000006 4.0e-06 56.2 77 45.5


User provided reference genes

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