Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc179.51 Carica papaya HOM05D006790 ORTHO05D007715 5.9e-205 717.2 345 100.0
Manes.01G107100 Manihot esculenta HOM05D006790 ORTHO05D007715 4.0e-76 289.3 343 46.6
CiPaw.04G004400 Carya illinoinensis HOM05D006790 ORTHO05D007715 3.2e-73 279.6 335 48.1
Haze_14092 Corylus avellana HOM05D006790 ORTHO05D007715 4.7e-69 265.8 333 47.4
GSVIVG01036474001 Vitis vinifera HOM05D006790 ORTHO05D007715 3.1e-68 263.1 339 46.3
Thecc.07G120400 Theobroma cacao HOM05D006790 ORTHO05D007715 1.5e-67 260.8 328 44.8
Cfa007981 Carpinus fangiana HOM05D006790 ORTHO05D007715 2.2e-66 256.9 331 46.8
Potri.004G106000 Populus trichocarpa HOM05D006790 ORTHO05D007715 3.7e-66 256.1 334 44.9
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 1.9e-65 253.8 344 45.3
Dinv33908 Davidia involucrata HOM05D006790 ORTHO05D007715 5.4e-65 252.3 332 44.9
Atru.chr8.778 Acer truncatum HOM05D006790 ORTHO05D007715 2.3e-63 246.9 290 47.9
Duzib268G0872 Durio zibethinus HOM05D006790 ORTHO05D007715 6.6e-63 245.4 329 42.2
THA.LOC104822671 Tarenaya hassleriana HOM05D006790 ORTHO05D007715 1.5e-62 244.2 337 40.7
Sed0013505 Sechium edule HOM05D006790 ORTHO05D007715 2.5e-62 243.4 339 43.7
Ciclev10011421m.g Citrus clementina HOM05D006790 ORTHO05D007715 9.5e-62 241.5 290 47.6
ClCG05G011930 Citrullus lanatus HOM05D006790 ORTHO05D007715 1.2e-61 241.1 304 47.4
TWI53G1762 Tripterygium wilfordii HOM05D006790 ORTHO05D007715 1.6e-61 240.7 331 43.5
CSS0027059 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 3.1e-60 236.5 336 42.6
CsaV3_3G020510 Cucumis sativus L. HOM05D006790 ORTHO05D007715 1.2e-59 234.6 295 47.8
Gohir.A13G150200 Gossypium hirsutum HOM05D006790 ORTHO05D007715 2.0e-59 233.8 345 42.0
Gorai.013G174500 Gossypium raimondii HOM05D006790 ORTHO05D007715 5.8e-59 232.3 332 42.8
MSTRG.2949 Avicennia marina HOM05D006790 ORTHO05D007715 3.7e-58 229.6 334 43.7
MELO3C023782.2 Cucumis melo HOM05D006790 ORTHO05D007715 3.7e-58 229.6 287 48.4
Gohir.D13G154500 Gossypium hirsutum HOM05D006790 ORTHO05D007715 6.4e-58 228.8 332 42.5
Hma1.2p1_0588F.1_g184410 Hydrangea macrophylla HOM05D006790 ORTHO05D007715 1.1e-57 228.0 267 46.8
Migut.H00551 Erythranthe guttata HOM05D006790 ORTHO05D007715 2.4e-57 226.9 330 40.9
Nn3g17634 Nelumbo nucifera HOM05D006790 ORTHO05D007715 4.1e-57 226.1 336 41.7
Prupe.3G242700 Prunus persica HOM05D006790 ORTHO05D007715 4.1e-57 226.1 335 43.0
MD17G1072100 Malus domestica HOM05D006790 ORTHO05D007715 6.0e-56 222.2 341 42.8
A02p14030 Brassica napus HOM05D006790 ORTHO05D007715 3.0e-55 219.9 333 39.6
Thhalv10018524m.g Eutrema salsugineum HOM05D006790 ORTHO05D007715 6.6e-55 218.8 327 38.5
Sp5g22110 Schrenkiella parvula HOM05D006790 ORTHO05D007715 1.9e-54 217.2 333 38.4
BcaB05g24242 Brassica carinata HOM05D006790 ORTHO05D007715 3.3e-54 216.5 332 38.9
Carub.0002s1345 Capsella rubella HOM05D006790 ORTHO05D007715 1.2e-53 214.5 267 42.3
BraA02t06464Z Brassica rapa HOM05D006790 ORTHO05D007715 1.6e-53 214.2 277 41.9
CANSAT64G1240 Cannabis sativa HOM05D006790 ORTHO05D007715 4.7e-53 212.6 340 39.4
Hund19591 Selenicereus undatus HOM05D006790 ORTHO05D007715 8.1e-53 211.8 333 38.4
Rhsim10G0065300 Rhododendron simsii HOM05D006790 ORTHO05D007715 1.4e-52 211.1 375 37.9
AL2G25680 Arabidopsis lyrata HOM05D006790 ORTHO05D007715 2.4e-52 210.3 282 40.4
AT1G67180 Arabidopsis thaliana HOM05D006790 ORTHO05D007715 3.1e-52 209.9 258 42.2
Sopen02g015820 Solanum pennellii HOM05D006790 ORTHO05D007715 5.2e-52 209.1 340 40.6
PGR004G2315 Punica granatum HOM05D006790 ORTHO05D007715 6.8e-52 208.8 340 38.2
Aa31LG2G3550 Aethionema arabicum HOM05D006790 ORTHO05D007715 8.9e-52 208.4 334 38.3
BolC2t08416H Brassica oleracea HOM05D006790 ORTHO05D007715 1.2e-51 208.0 277 41.2
BcaC03g14811 Brassica carinata HOM05D006790 ORTHO05D007715 1.5e-51 207.6 333 38.1
CARHR059630 Cardamine hirsuta HOM05D006790 ORTHO05D007715 2.0e-51 207.2 280 39.6
Peaxi162Scf00019g00104 Petunia axillaris HOM05D006790 ORTHO05D007715 5.8e-51 205.7 338 40.2
C02p22620 Brassica napus HOM05D006790 ORTHO05D007715 7.6e-51 205.3 277 40.8
Phvul.004G048500 Phaseolus vulgaris HOM05D006790 ORTHO05D007715 1.3e-50 204.5 342 38.3
Solyc02g065620.3 Solanum lycopersicum HOM05D006790 ORTHO05D007715 1.3e-50 204.5 341 39.0
Zm00001eb178960 Zea mays HOM05D006790 ORTHO05D007715 1.3e-50 204.5 212 46.7
PGSC0003DMG400026556 Solanum tuberosum HOM05D006790 ORTHO05D007715 1.7e-50 204.1 263 44.1
Medtr6g016895 Medicago truncatula HOM05D006790 ORTHO05D007715 3.8e-50 203.0 291 42.3
TPR.G9681 Trifolium pratense HOM05D006790 ORTHO05D007715 3.8e-50 203.0 341 38.4
Actinidia36298 Actinidia chinensis HOM05D006790 ORTHO05D007715 4.9e-50 202.6 301 41.5
RcHm_v2.0_Chr2g0163811 Rosa chinensis HOM05D006790 ORTHO05D007715 1.1e-49 201.4 334 40.4
Os08g0414200 Oryza sativa ssp. japonica HOM05D006790 ORTHO05D007715 1.9e-49 200.7 204 48.5
FAN02G3906 Fragaria x ananassa HOM05D006790 ORTHO05D007715 4.1e-49 199.5 334 38.6
CAN.G93.39 Capsicum annuum HOM05D006790 ORTHO05D007715 7.1e-49 198.7 343 39.1
Nitab4.5_0004656g0020 Nicotiana tabacum HOM05D006790 ORTHO05D007715 7.1e-49 198.7 197 50.8
HPP92_018029 Vanilla planifolia HOM05D006790 ORTHO05D007715 9.2e-49 198.4 194 49.5
PSO063G5157 Papaver somniferum HOM05D006790 ORTHO05D007715 1.2e-48 198.0 377 37.7
Psat1g062760 Pisum sativum HOM05D006790 ORTHO05D007715 2.1e-48 197.2 274 40.9
VMungo0464G1394 Vigna mungo HOM05D006790 ORTHO05D007715 2.1e-48 197.2 269 41.6
Glyma.19G042100 Glycine max HOM05D006790 ORTHO05D007715 6.0e-48 195.7 269 43.1
Lsat_1_v5_gn_2_86460 Lactuca sativa HOM05D006790 ORTHO05D007715 6.0e-48 195.7 228 46.9
Aqoxy3G03826 Aquilegia oxysepala HOM05D006790 ORTHO05D007715 1.3e-47 194.5 358 37.2
PSO782G2169 Papaver somniferum HOM05D006790 ORTHO05D007715 1.7e-47 194.1 378 36.2
AUR62031597 Chenopodium quinoa HOM05D006790 ORTHO05D007715 3.9e-47 193.0 330 38.5
HanXRQChr14g0448141 Helianthus annuus HOM05D006790 ORTHO05D007715 5.6e-46 189.1 228 45.2
Cc07_g04880 Coffea canephora HOM05D006790 ORTHO05D007715 1.6e-45 187.6 203 47.8
Lalb_Chr21g0318021 Lupinus albus HOM05D006790 ORTHO05D007715 2.8e-45 186.8 268 41.0
Sc23g0006450 Simmondsia chinensis HOM05D006790 ORTHO05D007715 3.6e-45 186.4 234 43.6
Lalb_Chr02g0158421 Lupinus albus HOM05D006790 ORTHO05D007715 4.7e-45 186.0 207 48.3
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 6.2e-45 185.7 268 40.3
Eucgr.I02107 Eucalyptus grandis HOM05D006790 ORTHO05D007715 1.1e-44 184.9 314 37.6
SGA_v2.0_scaffold204G41662 Striga asiatica HOM05D006790 ORTHO05D007715 6.9e-44 182.2 338 37.3
EL10Ac2g04125 Beta vulgaris HOM05D006790 ORTHO05D007715 1.2e-43 181.4 347 35.7
arahy.Tifrunner.gnm1.ann1.3TKD3Z Arachis hypogaea HOM05D006790 ORTHO05D007715 1.3e-42 177.9 342 36.5
arahy.Tifrunner.gnm1.ann1.9J9R5Y Arachis hypogaea HOM05D006790 ORTHO05D007715 1.7e-42 177.6 281 38.8
Ah.09g229220 Amaranthus hybridus HOM05D006790 ORTHO05D007715 6.4e-42 175.6 234 40.2
Sabra04G0076300 Salix brachista HOM05D001314 ORTHO05D001165 3.5e-40 169.9 279 40.9
CiPaw.03G006800 Carya illinoinensis HOM05D006790 ORTHO05D007715 2.3e-39 167.2 271 41.3
AUR62012471 Chenopodium quinoa HOM05D006790 ORTHO05D007715 1.1e-38 164.9 320 35.9
TAR371G0767 Trochodendron aralioides HOM05D006790 ORTHO05D007715 7.3e-38 162.2 113 68.1
Lj2g0010226 Lotus japonicus HOM05D006790 ORTHO05D007715 6.2e-37 159.1 332 31.9
BcaNung06915 Brassica carinata HOM05D006790 ORTHO05D007715 1.1e-36 158.3 330 32.7
ECA238G0674 Erigeron canadensis HOM05D000337 ORTHO05D007715 2.6e-35 153.7 209 42.6
MBI14_g10506_MAGBIO Magnolia biondii HOM05D006790 ORTHO05D007715 5.8e-35 152.5 293 38.2
Zm00001eb042310 Zea mays HOM05D006790 ORTHO05D007715 5.8e-35 152.5 190 42.6
Oeu025124.3 Olea europaea HOM05D006790 ORTHO05D007715 1.3e-34 151.4 279 38.7
Lj7A8G41 Lonicera japonica HOM05D006790 ORTHO05D007715 1.7e-34 151.0 115 60.9
vmacro05586 Vaccinium macrocarpon HOM05D006790 ORTHO05D007715 3.8e-34 149.8 271 39.5
CSS0043876 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 6.4e-34 149.1 270 38.9
ATR0691G168 Amborella trichopoda HOM05D006790 ORTHO05D007715 4.2e-33 146.4 335 30.4
Lj2g0002333 Lotus japonicus HOM05D006790 ORTHO05D007715 6.7e-31 139.0 322 31.7
Eucgr.I02105 Eucalyptus grandis HOM05D006790 ORTHO05D007715 1.1e-30 138.3 221 36.7
FAN09G4784 Fragaria x ananassa HOM05D006790 ORTHO05D007715 8.1e-29 132.1 268 35.8
FAN05G5467 Fragaria x ananassa HOM05D006790 ORTHO05D007715 2.4e-28 130.6 267 36.0
FvH4_6g45660 Fragaria vesca HOM05D006790 ORTHO05D007715 3.1e-28 130.2 268 35.8
FAN14G5652 Fragaria x ananassa HOM05D006790 ORTHO05D007715 3.1e-28 130.2 268 35.8
DCAR_007524 Daucus carota HOM05D000337 ORTHO05D007715 1.1e-25 121.7 132 50.0
Nitab4.5_0001324g0030 Nicotiana tabacum HOM05D006790 ORTHO05D007715 3.2e-25 120.2 283 35.3
Lj7A8G40 Lonicera japonica HOM05D006790 ORTHO05D007715 5.3e-20 102.8 152 40.8
Mapoly0081s0071 Marchantia polymorpha HOM05D006790 ORTHO05D007715 6.9e-20 102.4 202 32.2
SMO141G0131 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 2.5e-17 94.0 200 30.5
SMO170G0045 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 3.2e-17 93.6 200 30.5
Peaxi162Scf00019g00411 Petunia axillaris HOM05D006790 ORTHO05D007715 3.0e-15 87.0 282 30.9
SHI25900 Sapria himalayana HOM05D006790 ORTHO05D007715 5.1e-15 86.3 52 69.2
Actinidia18110 Actinidia chinensis HOM05D006790 ORTHO05D007715 7.4e-14 82.4 159 35.2
Oeu049333.1 Olea europaea HOM05D006790 ORTHO05D007715 3.1e-12 77.0 53 52.8
Pp3c17_13020 Physcomitrium patens HOM05D006790 ORTHO05D007715 3.8e-10 70.1 190 28.9
AagrBONN_evm.TU.Sc2ySwM_117.2827 Anthoceros agrestis HOM05D006790 ORTHO05D007715 2.1e-08 64.3 196 27.0
CBR_g45172 Chara braunii HOM05D002798 ORTHO05D007715 7.4e-06 55.8 194 23.2


User provided reference genes

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