Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc178.14 Carica papaya HOM05D000290 ORTHO05D006676 6.7e-94 347.4 188 100.0
Haze_14311 Corylus avellana HOM05D000290 ORTHO05D006676 7.3e-40 167.9 130 74.6
Cfa007761 Carpinus fangiana HOM05D000290 ORTHO05D006676 8.1e-39 164.5 140 68.6
CiPaw.04G048800 Carya illinoinensis HOM05D000290 ORTHO05D006676 8.1e-39 164.5 131 71.0
Prupe.3G015600 Prunus persica HOM05D000290 ORTHO05D006676 5.2e-38 161.8 130 70.0
MD17G1270600 Malus domestica HOM05D000290 ORTHO05D006676 1.5e-37 160.2 132 69.7
Nn4g24663 Nelumbo nucifera HOM05D000290 ORTHO05D006676 1.5e-37 160.2 135 66.7
RcHm_v2.0_Chr3g0490181 Rosa chinensis HOM05D000290 ORTHO05D006676 2.0e-37 159.8 131 69.5
Manes.01G122600 Manihot esculenta HOM05D000290 ORTHO05D006676 3.7e-36 155.6 132 69.7
QL02p060375 Quercus lobata HOM05D000290 ORTHO05D006676 4.9e-36 155.2 131 71.0
FvH4_1g30310 Fragaria vesca HOM05D000290 ORTHO05D006676 1.9e-35 153.3 132 68.2
FAN19G0545 Fragaria x ananassa HOM05D000290 ORTHO05D006676 1.9e-35 153.3 132 68.2
Ciclev10019576m.g Citrus clementina HOM05D000290 ORTHO05D006676 1.2e-34 150.6 132 65.2
Actinidia17170 Actinidia chinensis HOM05D000290 ORTHO05D006676 1.6e-34 150.2 145 61.4
Potri.004G075100 Populus trichocarpa HOM05D000290 ORTHO05D006676 4.6e-34 148.7 136 64.0
Atru.chr12.1226 Acer truncatum HOM05D000290 ORTHO05D006676 1.3e-33 147.1 132 65.2
TWI74G0971 Tripterygium wilfordii HOM05D000290 ORTHO05D006676 1.3e-33 147.1 137 62.0
Sp5g21020 Schrenkiella parvula HOM05D000290 ORTHO05D006676 2.3e-33 146.4 137 59.1
Nitab4.5_0002351g0020 Nicotiana tabacum HOM05D000290 ORTHO05D006676 5.1e-33 145.2 124 66.1
Sopen04g003420 Solanum pennellii HOM05D000290 ORTHO05D006676 6.6e-33 144.8 124 66.1
Nitab4.5_0005469g0010 Nicotiana tabacum HOM05D000290 ORTHO05D006676 8.6e-33 144.4 155 56.1
Solyc04g008300.1 Solanum lycopersicum HOM05D000290 ORTHO05D006676 8.6e-33 144.4 124 66.1
TAR629G2667 Trochodendron aralioides HOM05D000290 ORTHO05D006676 8.6e-33 144.4 123 69.1
CANSAT01G1953 Cannabis sativa HOM05D000290 ORTHO05D006676 1.1e-32 144.1 146 62.3
Rhsim10G0183800 Rhododendron simsii HOM05D000290 ORTHO05D006676 1.1e-32 144.1 133 60.9
BcaB03g15306 Brassica carinata HOM05D000290 ORTHO05D006676 1.5e-32 143.7 137 56.2
PGSC0003DMG400045947 Solanum tuberosum HOM05D000290 ORTHO05D006676 1.9e-32 143.3 124 64.5
PGSC0003DMG404029448 Solanum tuberosum HOM05D000290 ORTHO05D006676 1.9e-32 143.3 124 64.5
vmacro20482 Vaccinium macrocarpon HOM05D000290 ORTHO05D006676 3.3e-32 142.5 137 58.4
Migut.K01085 Erythranthe guttata HOM05D000290 ORTHO05D006676 4.3e-32 142.1 135 57.8
AL2G23430 Arabidopsis lyrata HOM05D000290 ORTHO05D006676 5.6e-32 141.7 132 57.6
CSS0016026 Camellia sinensis var. sinensis HOM05D004515 ORTHO05D006676 5.6e-32 141.7 131 62.6
FAN28G0448 Fragaria x ananassa HOM05D000290 ORTHO05D006676 5.6e-32 141.7 110 71.8
SalBow5G4017 Salvia bowleyana HOM05D000290 ORTHO05D006676 5.6e-32 141.7 138 58.0
SGA_v2.0_scaffold45G17125 Striga asiatica HOM05D000290 ORTHO05D006676 7.3e-32 141.4 131 62.6
FAN26G0295 Fragaria x ananassa HOM05D000290 ORTHO05D006676 1.2e-31 140.6 109 72.5
Dinv28236 Davidia involucrata HOM05D000290 ORTHO05D006676 1.6e-31 140.2 133 63.9
THA.LOC104822112 Tarenaya hassleriana HOM05D000290 ORTHO05D006676 2.8e-31 139.4 134 56.7
A07p33030 Brassica napus HOM05D000290 ORTHO05D006676 3.6e-31 139.0 138 54.3
Sabra04G0049700 Salix brachista HOM05D000290 ORTHO05D006676 3.6e-31 139.0 110 70.9
CsaV3_3G020320 Cucumis sativus L. HOM05D000290 ORTHO05D006676 4.7e-31 138.7 132 59.8
BraA07t30931Z Brassica rapa HOM05D000290 ORTHO05D006676 6.2e-31 138.3 138 54.3
PGSC0003DMG400029496 Solanum tuberosum HOM05D000290 ORTHO05D006676 6.2e-31 138.3 124 62.9
Aqoxy3G04138_Aqoxy3G04139 Aquilegia oxysepala HOM05D000290 ORTHO05D006676 8.1e-31 137.9 149 57.0
Aqoxy514s002 Aquilegia oxysepala HOM05D004515 ORTHO05D006676 8.1e-31 137.9 149 57.0
Carub.0002s1190 Capsella rubella HOM05D000290 ORTHO05D006676 1.4e-30 137.1 131 57.3
PSO063G2011 Papaver somniferum HOM05D000290 ORTHO05D006676 1.4e-30 137.1 132 61.4
BcaC08g46093 Brassica carinata HOM05D000290 ORTHO05D006676 2.4e-30 136.3 138 53.6
C06p39280 Brassica napus HOM05D000290 ORTHO05D006676 5.2e-30 135.2 137 52.6
BolC6t39021H Brassica oleracea HOM05D000290 ORTHO05D006676 5.2e-30 135.2 137 52.6
CAN.G966.4 Capsicum annuum HOM05D000290 ORTHO05D006676 6.8e-30 134.8 124 62.1
DCAR_003415 Daucus carota HOM05D000238 ORTHO05D001156 6.8e-30 134.8 125 58.4
GSVIVG01035242001 Vitis vinifera HOM05D000290 ORTHO05D006676 6.8e-30 134.8 123 65.0
Oeu009443.1 Olea europaea HOM05D000290 ORTHO05D006676 8.9e-30 134.4 125 60.8
Cc07_g12870 Coffea canephora HOM05D000290 ORTHO05D006676 9.9e-29 131.0 124 62.1
PGR042G1712 Punica granatum HOM05D000290 ORTHO05D006676 1.7e-28 130.2 134 58.2
Sc14g0006520 Simmondsia chinensis HOM05D000290 ORTHO05D006676 2.2e-28 129.8 134 57.5
MELO3C023760.2 Cucumis melo HOM05D000290 ORTHO05D006676 2.9e-28 129.4 132 58.3
MSTRG.3678 Avicennia marina HOM05D000290 ORTHO05D006676 4.9e-28 128.6 130 57.7
Sed0027292 Sechium edule HOM05D000290 ORTHO05D006676 6.4e-28 128.3 132 56.8
Aa31LG2G2750 Aethionema arabicum HOM05D000290 ORTHO05D006676 8.4e-28 127.9 123 56.1
Os11g0549635 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D006676 8.4e-28 127.9 114 62.3
Thecc.04G000900 Theobroma cacao HOM05D000290 ORTHO05D006676 1.1e-27 127.5 132 57.6
FAN23G1057 Fragaria x ananassa HOM05D004515 ORTHO05D006676 1.9e-27 126.7 104 68.3
Peaxi162Scf00005g01013 Petunia axillaris HOM05D000290 ORTHO05D006676 3.2e-27 125.9 91 75.8
Gohir.D07G175800 Gossypium hirsutum HOM05D000290 ORTHO05D006676 4.1e-27 125.6 132 57.6
Gorai.001G196700 Gossypium raimondii HOM05D000290 ORTHO05D006676 4.1e-27 125.6 132 57.6
Ah.10g032610 Amaranthus hybridus HOM05D000290 ORTHO05D006676 3.5e-26 122.5 140 50.7
SalBow5G1779 Salvia bowleyana HOM05D000290 ORTHO05D006676 3.5e-26 122.5 125 56.0
Lj2C513G4 Lonicera japonica HOM05D000290 ORTHO05D006676 1.3e-25 120.6 87 72.4
HanXRQChr09g0259791 Helianthus annuus HOM05D000290 ORTHO05D006676 2.3e-25 119.8 132 53.0
ATR0598G192 Amborella trichopoda HOM05D000290 ORTHO05D006676 3.0e-25 119.4 107 60.7
Gohir.A07G169400 Gossypium hirsutum HOM05D000290 ORTHO05D006676 5.1e-25 118.6 132 55.3
GSVIVG01001583001 Vitis vinifera HOM05D017567 ORTHO05D006676 1.1e-24 117.5 109 64.2
ECA246G5015 Erigeron canadensis HOM05D000290 ORTHO05D006676 3.6e-23 112.5 135 50.4
unitig_32.g11782 Utricularia gibba HOM05D000290 ORTHO05D006676 1.1e-22 110.9 112 53.6
Duzib138G1691 Durio zibethinus HOM05D000290 ORTHO05D006676 1.8e-22 110.2 129 55.0
Thhalv10018274m.g Eutrema salsugineum HOM05D000290 ORTHO05D006676 2.4e-22 109.8 167 41.3
Zm00001eb201710 Zea mays HOM05D000290 ORTHO05D006676 2.4e-22 109.8 123 50.4
SEGI_23950 Sequoiadendron giganteum HOM05D000290 ORTHO05D006676 4.0e-22 109.0 118 51.7
Eucgr.J01643 Eucalyptus grandis HOM05D000290 ORTHO05D006676 9.0e-22 107.8 87 63.2
AUR62018236 Chenopodium quinoa HOM05D000290 ORTHO05D006676 2.0e-21 106.7 84 63.1
Eucgr.J01633 Eucalyptus grandis HOM05D004515 ORTHO05D006676 9.9e-21 104.4 124 52.4
GSVIVG01029100001 Vitis vinifera HOM05D017567 ORTHO05D006676 1.7e-20 103.6 96 65.6
Mapoly0097s0048 Marchantia polymorpha HOM05D000290 ORTHO05D006676 4.2e-19 99.0 117 47.9
Glyma.02G241300 Glycine max HOM05D000290 ORTHO05D006676 1.9e-16 90.1 147 42.2
SMO365G0022 Selaginella moellendorffii HOM05D000290 ORTHO05D006676 2.5e-16 89.7 112 48.2
LjContig00141g0021713 Lotus japonicus HOM05D000290 ORTHO05D006676 3.3e-16 89.4 143 44.8
Phvul.008G239800 Phaseolus vulgaris HOM05D000290 ORTHO05D006676 3.3e-16 89.4 140 40.7
Lalb_Chr04g0251481 Lupinus albus HOM05D000290 ORTHO05D006676 5.6e-16 88.6 75 61.3
arahy.Tifrunner.gnm1.ann1.BI36IT Arachis hypogaea HOM05D000290 ORTHO05D006676 1.3e-15 87.4 129 40.3
Ca_05767_v3 Cicer arietinum L. HOM05D000290 ORTHO05D006676 2.1e-15 86.7 141 41.8
Medtr5g077080 Medicago truncatula HOM05D000290 ORTHO05D006676 2.8e-15 86.3 142 40.8
VMungo0647G0176 Vigna mungo HOM05D000290 ORTHO05D006676 3.6e-15 85.9 89 51.7
Psat2g043960 Pisum sativum HOM05D000290 ORTHO05D006676 6.2e-15 85.1 141 40.4
TPR.G18885 Trifolium pratense HOM05D000290 ORTHO05D006676 8.1e-15 84.7 150 38.0
arahy.Tifrunner.gnm1.ann1.NBYX54 Arachis hypogaea HOM05D000290 ORTHO05D006676 1.4e-14 84.0 134 37.3
Lsat_1_v5_gn_8_112060 Lactuca sativa HOM05D000290 ORTHO05D006676 9.0e-14 81.3 69 60.9
Pp3c13_6150 Physcomitrium patens HOM05D000290 ORTHO05D006676 5.8e-13 78.6 137 37.2
AT1G65950 Arabidopsis thaliana HOM05D000290 ORTHO05D006676 4.2e-11 72.4 54 66.7
CBR_g48308 Chara braunii HOM05D000290 ORTHO05D006676 4.6e-10 68.9 119 35.3
ClCG05G012110 Citrullus lanatus HOM05D000290 ORTHO05D006676 1.0e-09 67.8 126 38.9


User provided reference genes

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