Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 5.8e-83 310.8 157 100.0
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 1.3e-26 123.6 132 51.5
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 6.5e-26 121.3 132 50.8
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 5.5e-25 118.2 135 51.1
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 8.3e-21 104.4 134 44.0
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 5.4e-20 101.7 137 46.0
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 5.0e-18 95.1 134 45.5
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.5e-17 93.6 135 43.7
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.5e-17 93.6 135 43.7
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.9e-17 93.2 130 44.6
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 2.5e-17 92.8 142 43.0
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 2.5e-17 92.8 130 47.7
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 4.2e-17 92.0 131 40.5
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 9.5e-17 90.9 134 44.0
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 9.5e-17 90.9 131 42.7
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.2e-16 90.5 136 44.1
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.6e-16 90.1 135 43.0
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 2.1e-16 89.7 136 41.2
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 2.8e-16 89.4 130 40.8
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 2.8e-16 89.4 130 40.8
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 4.7e-16 88.6 131 41.2
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 4.7e-16 88.6 136 41.2
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 6.1e-16 88.2 130 40.0
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 6.8e-15 84.7 140 43.6
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 1.3e-13 80.5 130 39.2
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 1.1e-12 77.4 135 41.5
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 1.8e-12 76.6 135 40.7
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 5.4e-12 75.1 128 36.7
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 5.4e-12 75.1 135 35.6
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 9.2e-12 74.3 136 40.4
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 1.2e-11 73.9 133 39.8
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.2e-11 73.9 160 36.2
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 5.0e-10 68.6 134 37.3
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.5e-09 66.2 130 36.9
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 3.3e-09 65.9 130 36.9
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 9.5e-09 64.3 124 39.5
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 1.6e-08 63.5 137 37.2
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 2.1e-08 63.2 140 37.1
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.8e-08 62.8 140 36.4
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 3.6e-08 62.4 133 38.3
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 8.0e-08 61.2 133 36.8
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 1.0e-07 60.8 136 34.6
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.0e-07 60.8 133 35.3
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 1.0e-07 60.8 133 35.3
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 1.4e-07 60.5 130 34.6
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 2.3e-07 59.7 137 36.5
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 3.0e-07 59.3 138 33.3
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 1.5e-06 57.0 136 33.8
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 2.0e-06 56.6 126 34.9
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 2.0e-06 56.6 135 36.3


User provided reference genes

Program Settings