Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 2.0e-169 599.0 301 100.0
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 8.0e-57 224.9 208 61.5
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 8.9e-56 221.5 216 56.5
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 1.5e-55 220.7 216 58.3
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 2.2e-54 216.9 275 46.5
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 3.7e-54 216.1 216 55.6
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 3.7e-54 216.1 217 57.6
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 3.7e-54 216.1 216 55.6
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 4.9e-54 215.7 275 46.9
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 2.4e-53 213.4 218 54.1
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 2.4e-53 213.4 218 56.0
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 7.0e-53 211.8 218 54.6
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 7.0e-53 211.8 218 54.6
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 2.1e-52 210.3 208 55.8
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 2.1e-52 210.3 218 55.0
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 3.5e-52 209.5 208 57.2
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 3.5e-52 209.5 212 56.1
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 7.8e-52 208.4 208 57.7
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 7.8e-52 208.4 218 54.1
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 1.0e-51 208.0 219 56.6
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 3.9e-51 206.1 218 55.0
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 3.9e-51 206.1 218 55.0
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.9e-51 206.1 218 53.7
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 5.1e-51 205.7 216 55.6
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 8.6e-51 204.9 218 53.2
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 1.1e-50 204.5 208 55.8
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 1.5e-50 204.1 218 53.7
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 3.3e-50 203.0 218 54.1
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 5.6e-50 202.2 208 55.8
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 5.6e-50 202.2 218 53.2
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 5.6e-50 202.2 209 54.1
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 5.6e-50 202.2 216 53.7
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 7.3e-50 201.8 218 53.2
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 2.1e-49 200.3 218 53.7
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 2.8e-49 199.9 208 54.8
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 3.6e-49 199.5 216 53.2
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 4.7e-49 199.1 218 51.4
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 3.1e-48 196.4 216 50.5
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 6.8e-48 195.3 217 52.1
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 8.9e-48 194.9 231 50.2
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 8.9e-48 194.9 231 50.2
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 1.2e-47 194.5 222 50.0
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 1.2e-47 194.5 216 50.9
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 1.5e-47 194.1 231 49.4
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 2.0e-47 193.7 207 51.7
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 4.4e-47 192.6 216 52.8
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 4.4e-47 192.6 207 53.6
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 5.8e-47 192.2 216 50.9
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 5.8e-47 192.2 209 54.1
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 1.7e-46 190.7 216 50.5
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 1.7e-46 190.7 216 52.8
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 2.2e-46 190.3 216 51.4
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 2.2e-46 190.3 216 50.9
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 2.2e-46 190.3 217 50.2
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 2.9e-46 189.9 216 50.9
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 3.7e-46 189.5 234 49.1
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 4.9e-46 189.1 216 49.1
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 8.3e-46 188.3 216 50.9
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 8.3e-46 188.3 219 50.7
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 1.1e-45 188.0 222 50.5
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.1e-45 188.0 199 54.3
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 1.4e-45 187.6 217 52.1
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 1.4e-45 187.6 219 48.9
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 2.4e-45 186.8 216 50.9
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 3.2e-45 186.4 217 50.2
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 3.2e-45 186.4 227 47.6
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 5.4e-45 185.7 216 50.5
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 7.1e-45 185.3 229 47.6
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 9.2e-45 184.9 264 44.7
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 1.2e-44 184.5 216 49.5
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 1.7e-43 180.6 216 49.1
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 2.3e-43 180.3 216 46.8
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 6.6e-43 178.7 216 48.6
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 1.2e-41 174.5 216 48.6
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 1.6e-41 174.1 304 39.5
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 3.6e-41 172.9 208 50.5
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 1.8e-40 170.6 223 44.4
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 1.5e-39 167.5 255 42.0
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 5.8e-39 165.6 212 47.2
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 1.6e-36 157.5 275 38.9
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 1.2e-31 141.4 164 50.0
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 2.4e-29 133.7 163 50.3
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 2.7e-28 130.2 130 55.4
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 3.9e-27 126.3 160 50.0
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 3.3e-26 123.2 208 40.4
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 9.6e-26 121.7 120 56.7
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.3e-25 121.3 120 56.7
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 2.8e-25 120.2 114 58.8
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 1.1e-24 118.2 115 58.3
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 2.4e-24 117.1 113 57.5
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 4.0e-24 116.3 128 52.3
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 1.5e-23 114.4 120 53.3
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 2.3e-19 100.5 224 30.8
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.9e-19 99.8 97 57.7
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 4.3e-18 96.3 98 56.1
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 4.3e-18 96.3 104 50.0
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 7.4e-18 95.5 65 69.2
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 7.4e-18 95.5 200 35.0
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 1.3e-17 94.7 211 34.1
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 6.2e-17 92.4 201 33.8
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 1.6e-12 77.8 93 47.3
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 6.2e-09 65.9 49 65.3
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 6.2e-09 65.9 266 24.1


User provided reference genes

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