Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 3.9e-153 544.7 256 100.0
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 4.7e-106 388.3 256 71.5
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 8.0e-106 387.5 256 69.9
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 4.0e-105 385.2 256 70.3
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 1.5e-104 383.3 256 70.3
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 4.4e-104 381.7 252 71.0
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 1.7e-103 379.8 252 70.6
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 6.3e-103 377.9 258 68.6
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.1e-102 377.1 256 69.1
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.1e-102 377.1 257 68.9
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 2.4e-102 375.9 258 68.2
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 5.3e-102 374.8 256 67.6
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 2.0e-101 372.9 303 59.7
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.9e-101 371.3 251 68.9
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 2.9e-100 369.0 256 67.2
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 2.9e-100 369.0 256 66.0
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 5.0e-100 368.2 244 69.7
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 1.5e-99 366.7 256 64.8
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.2e-99 365.5 256 65.6
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 7.2e-99 364.4 244 68.4
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 1.6e-98 363.2 251 68.1
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 2.1e-98 362.8 257 65.8
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.0e-98 360.9 251 66.9
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.0e-97 360.5 258 67.1
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.3e-97 359.4 249 67.5
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 6.8e-97 357.8 259 65.6
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 6.8e-97 357.8 256 66.4
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 8.8e-97 357.5 256 66.0
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 1.5e-96 356.7 230 71.3
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 2.8e-95 352.4 256 65.2
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 8.3e-95 350.9 254 64.2
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 8.3e-95 350.9 252 65.1
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.1e-94 350.5 243 67.1
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 1.1e-94 350.5 256 65.6
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 1.8e-94 349.7 249 64.3
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 2.4e-94 349.4 240 66.7
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 2.4e-94 349.4 240 66.7
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 2.7e-93 345.9 256 64.1
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 1.3e-92 343.6 258 65.1
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 5.0e-92 341.7 266 61.3
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 4.2e-91 338.6 249 63.9
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 8.0e-90 334.3 244 63.9
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 1.4e-89 333.6 251 62.2
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.8e-89 333.2 256 62.5
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 5.2e-89 331.6 256 59.8
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 2.6e-88 329.3 255 61.6
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 3.4e-88 328.9 240 63.3
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 7.0e-86 321.2 244 60.2
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 1.3e-84 317.0 260 58.5
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 5.0e-84 315.1 250 60.4
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 5.0e-84 315.1 253 59.7
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 1.2e-82 310.5 241 60.2
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 1.2e-82 310.5 258 58.5
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 1.6e-82 310.1 257 59.1
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 2.6e-80 302.8 252 59.1
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 4.1e-78 295.4 250 56.4
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 7.0e-78 294.7 243 56.0
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 1.6e-77 293.5 224 60.7
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 5.0e-76 288.5 246 55.7
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 1.5e-75 287.0 194 70.1
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 7.3e-75 284.6 256 52.7
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 1.6e-74 283.5 255 54.1
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 1.8e-73 280.0 244 56.6
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 5.2e-73 278.5 243 53.9
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 4.9e-71 271.9 237 53.6
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 1.2e-69 267.3 258 51.2
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 2.1e-69 266.5 240 52.9
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 1.7e-68 263.5 199 64.3
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 8.6e-68 261.2 258 50.0
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 2.5e-67 259.6 246 51.2
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 5.6e-67 258.5 258 49.6
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 1.6e-66 256.9 268 49.3
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 1.8e-65 253.4 251 50.2
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.5e-64 250.4 174 69.0
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 4.6e-61 238.8 224 54.0
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 4.7e-58 228.8 258 45.3
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.2e-53 214.2 146 69.2
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 3.3e-51 206.1 137 70.8
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 6.2e-50 201.8 150 65.3
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 9.3e-46 188.0 119 69.7
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 2.7e-45 186.4 162 56.2
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 1.3e-44 184.1 219 44.7
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 1.5e-40 170.6 102 73.5
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 3.2e-38 162.9 140 53.6
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 4.2e-38 162.5 213 43.7
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 5.3e-33 145.6 149 50.3
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 2.2e-23 113.6 199 38.7
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 7.1e-22 108.6 72 59.7
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 1.6e-21 107.5 96 50.0
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 1.3e-20 104.4 95 54.7
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 1.5e-19 100.9 90 47.8
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 7.7e-16 88.6 107 48.6
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.2e-13 81.3 58 60.3
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 5.0e-07 59.3 63 52.4


User provided reference genes

Program Settings