Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 4.0e-193 677.9 349 100.0
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 4.0e-132 475.3 301 79.1
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.2e-128 463.8 279 82.1
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 1.5e-126 456.8 349 71.1
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 4.2e-126 455.3 339 69.6
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 7.2e-126 454.5 340 70.0
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.2e-125 453.8 285 76.5
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 1.2e-125 453.8 352 68.5
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.2e-125 453.8 347 69.7
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.6e-125 453.4 352 68.2
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 1.6e-125 453.4 279 78.5
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.1e-125 453.0 343 68.8
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.8e-125 452.6 345 70.1
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.0e-124 450.7 337 70.0
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 1.8e-124 449.9 353 69.4
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 5.2e-124 448.4 345 69.9
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 1.2e-123 447.2 337 69.1
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 1.5e-123 446.8 309 72.5
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 1.5e-123 446.8 312 73.7
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 2.6e-123 446.0 357 68.3
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 1.7e-122 443.4 337 68.5
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 1.7e-122 443.4 337 68.5
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 1.7e-122 443.4 337 68.5
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 1.7e-122 443.4 318 73.0
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 1.7e-122 443.4 328 68.3
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 2.8e-122 442.6 316 69.3
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 3.7e-122 442.2 360 66.1
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 6.3e-122 441.4 360 65.6
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 6.3e-122 441.4 279 76.3
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.1e-121 440.7 345 67.5
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 1.4e-121 440.3 346 66.8
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 1.8e-121 439.9 341 68.3
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 4.1e-121 438.7 279 77.8
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 2.0e-120 436.4 279 77.4
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 3.5e-120 435.6 285 76.5
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 5.9e-120 434.9 342 67.3
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 5.9e-120 434.9 287 76.3
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 2.3e-119 433.0 340 68.2
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 5.0e-119 431.8 357 65.8
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 6.6e-119 431.4 282 73.8
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 8.6e-119 431.0 332 68.4
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 8.6e-119 431.0 356 66.0
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 1.1e-118 430.6 344 66.6
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 1.5e-118 430.3 347 67.4
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 3.3e-118 429.1 284 74.3
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 4.3e-118 428.7 319 70.5
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 5.6e-118 428.3 335 65.7
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 7.3e-118 427.9 350 66.0
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 1.6e-117 426.8 340 65.9
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 1.6e-117 426.8 363 64.2
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 2.8e-117 426.0 324 69.1
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 4.7e-117 425.2 264 78.4
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 4.7e-117 425.2 345 66.7
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 8.0e-117 424.5 369 63.4
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 3.0e-116 422.5 351 64.7
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 3.0e-116 422.5 352 65.3
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 5.2e-116 421.8 360 63.6
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 6.8e-116 421.4 336 66.1
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 2.6e-115 419.5 324 67.6
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 4.4e-115 418.7 324 67.3
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 2.9e-114 416.0 283 75.6
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.8e-113 413.3 322 67.1
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 5.4e-113 411.8 308 65.6
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 1.2e-112 410.6 308 65.9
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 1.6e-112 410.2 344 62.8
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 8.6e-111 404.4 353 62.3
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 5.6e-110 401.7 348 61.5
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 5.6e-110 401.7 339 64.6
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 2.1e-109 399.8 348 63.8
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 4.7e-109 398.7 282 70.6
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 4.0e-108 395.6 351 59.5
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 8.9e-108 394.4 347 62.0
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 1.7e-106 390.2 280 68.6
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 2.2e-106 389.8 341 60.7
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.0e-104 383.3 314 65.9
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 3.9e-103 379.0 281 66.9
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 9.5e-102 374.4 319 60.2
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.2e-99 367.5 261 68.6
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 1.5e-99 367.1 346 56.9
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 2.0e-99 366.7 338 57.7
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 2.0e-99 366.7 260 68.8
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 1.7e-98 363.6 303 60.4
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 6.4e-98 361.7 255 67.5
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 1.7e-95 353.6 256 68.0
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 2.3e-95 353.2 344 54.1
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 8.6e-95 351.3 255 66.3
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 5.6e-94 348.6 255 64.3
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 1.8e-92 343.6 350 58.9
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 6.8e-92 341.7 257 66.9
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.4e-91 339.3 248 69.0
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 5.8e-91 338.6 242 69.4
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 9.9e-91 337.8 254 63.0
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 1.3e-90 337.4 255 61.6
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.9e-90 336.3 248 66.9
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 8.4e-90 334.7 271 58.3
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 1.1e-89 334.3 255 61.2
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 4.1e-89 332.4 254 64.6
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 4.1e-89 332.4 273 60.4
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 7.1e-89 331.6 256 63.7
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 9.2e-89 331.3 250 66.0
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.6e-88 330.5 254 63.8
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 2.7e-88 329.7 255 60.8
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.5e-86 323.2 257 61.5
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 3.3e-86 322.8 259 61.0
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 7.3e-86 321.6 243 65.8
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 4.7e-85 318.9 255 59.6
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 4.7e-85 318.9 255 59.6
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.1e-84 317.8 253 58.9
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 1.3e-82 310.8 255 57.6
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 1.1e-81 307.8 253 57.7
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 2.4e-81 306.6 257 56.4
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 4.2e-81 305.8 230 66.1
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 2.1e-80 303.5 257 56.0
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 2.1e-80 303.5 293 51.5
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 4.6e-80 302.4 232 59.9
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 1.0e-79 301.2 257 56.0
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-79 300.8 255 56.5
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-79 300.8 255 56.5
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 1.3e-79 300.8 257 55.6
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 1.7e-79 300.4 255 57.6
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 2.3e-79 300.1 244 66.4
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.5e-78 297.4 230 60.4
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 3.3e-78 296.2 255 55.7
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 3.3e-78 296.2 255 55.7
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 1.1e-73 281.2 197 70.1
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 3.0e-71 273.1 253 51.4
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.1e-70 271.2 251 54.2
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 1.6e-69 267.3 274 49.3
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 4.8e-69 265.8 229 54.6
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 1.4e-68 264.2 253 54.5
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.8e-68 263.8 251 54.6
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 4.5e-67 259.2 169 74.0
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.5e-64 249.6 257 51.8
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 4.6e-64 249.2 257 51.8
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 6.0e-64 248.8 192 64.6
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.8e-63 247.3 263 51.3
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 1.5e-62 244.2 164 70.7
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 3.4e-59 233.0 344 45.1
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 4.2e-57 226.1 224 54.0
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.8e-55 220.7 190 56.3
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 3.9e-55 219.5 138 77.5
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 1.3e-53 214.5 389 36.8
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 4.8e-53 212.6 179 55.9
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 4.1e-52 209.5 266 45.9
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 6.5e-50 202.2 135 72.6
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.2e-48 198.0 145 64.1
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.9e-46 190.7 166 53.0
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 2.6e-43 180.3 224 48.2
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 2.3e-39 167.2 133 63.2
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 3.3e-38 163.3 199 47.2
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 4.4e-38 162.9 237 38.8
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.8e-28 131.0 215 39.5
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 2.4e-28 130.6 177 46.9
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 3.1e-28 130.2 243 34.2
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 2.2e-26 124.0 87 65.5
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 5.5e-25 119.4 135 57.0
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 6.7e-23 112.5 110 50.0
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 2.0e-22 110.9 136 47.8
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 1.6e-19 101.3 91 58.2
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 5.9e-19 99.4 181 34.8
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.1e-17 95.1 247 27.5
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 9.4e-17 92.0 62 71.0
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 2.1e-16 90.9 65 69.2
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 2.6e-14 84.0 81 58.0
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 7.5e-14 82.4 68 63.2
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 8.3e-13 79.0 64 57.8
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 1.4e-12 78.2 70 54.3
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 2.0e-11 74.3 66 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 5.9e-11 72.8 272 28.3
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 5.0e-10 69.7 58 63.8
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 1.1e-09 68.6 64 54.7
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 2.5e-09 67.4 73 45.2


User provided reference genes

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