Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 2.3e-238 828.6 431 100.0
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 1.3e-100 370.9 436 54.1
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 4.0e-94 349.4 437 51.3
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 4.0e-94 349.4 437 51.5
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 5.3e-94 349.0 434 51.2
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.2e-93 347.8 442 51.6
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 3.8e-92 342.8 453 49.4
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 1.3e-87 327.8 460 48.3
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 2.6e-85 320.1 438 48.6
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 4.5e-85 319.3 429 49.2
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.7e-84 317.4 468 46.4
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.7e-84 317.4 395 51.6
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 3.2e-83 313.2 450 47.3
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 5.5e-83 312.4 433 48.0
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 7.2e-83 312.0 428 48.6
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 4.6e-82 309.3 434 47.5
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.0e-81 308.1 436 47.2
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.0e-81 308.1 436 47.9
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 2.3e-81 307.0 436 47.7
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 2.3e-81 307.0 441 48.8
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 3.3e-80 303.1 435 46.4
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 2.2e-79 300.4 457 45.5
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 2.8e-79 300.1 432 48.4
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-78 298.1 428 46.7
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 5.9e-77 292.4 428 45.8
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 1.0e-76 291.6 489 44.0
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 6.1e-74 282.3 486 42.6
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 7.9e-74 282.0 406 47.5
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 2.3e-73 280.4 428 43.7
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 6.7e-73 278.9 409 48.2
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 8.8e-73 278.5 462 44.2
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 2.0e-72 277.3 421 47.7
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 3.3e-72 276.6 439 44.6
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 5.7e-72 275.8 397 47.4
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 1.3e-71 274.6 442 46.4
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 7.0e-70 268.9 413 45.0
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-69 267.3 409 46.7
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-69 266.9 403 46.7
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 3.5e-69 266.5 408 45.8
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 6.5e-68 262.3 427 44.0
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 7.2e-67 258.8 479 41.3
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.2e-66 258.1 473 41.4
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 3.0e-65 253.4 451 42.1
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 3.9e-65 253.1 492 41.5
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 2.6e-64 250.4 401 45.4
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 3.3e-64 250.0 430 44.4
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 5.7e-64 249.2 492 41.7
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 7.4e-64 248.8 432 43.8
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 1.3e-63 248.1 449 42.8
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 1.7e-63 247.7 375 44.5
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.2e-63 247.3 442 43.9
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 4.8e-63 246.1 400 44.8
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.8e-62 244.2 451 42.6
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 7.0e-62 242.3 430 42.3
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 9.1e-62 241.9 432 42.8
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 9.1e-62 241.9 434 42.6
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 9.1e-62 241.9 492 39.0
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 1.6e-61 241.1 441 42.2
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.0e-61 240.7 287 52.6
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 7.2e-59 232.3 423 42.8
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 9.4e-59 231.9 447 40.7
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 2.7e-58 230.3 435 41.4
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 6.1e-58 229.2 449 41.2
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 3.4e-56 223.4 438 38.8
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 5.7e-56 222.6 438 41.8
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 5.7e-56 222.6 429 40.8
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 2.2e-55 220.7 466 38.4
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 6.3e-55 219.2 432 40.3
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 4.1e-54 216.5 430 39.1
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 7.0e-54 215.7 436 41.1
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 5.9e-53 212.6 485 39.0
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 1.3e-52 211.5 264 51.1
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 6.1e-50 202.6 417 40.3
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 1.4e-49 201.4 446 38.6
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 1.2e-48 198.4 355 42.8
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-48 197.2 253 48.6
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 4.4e-48 196.4 438 40.4
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 8.3e-47 192.2 309 45.0
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 7.0e-46 189.1 229 51.1
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-45 188.3 286 45.8
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 5.9e-45 186.0 436 37.6
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 1.7e-44 184.5 438 37.0
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 1.0e-41 175.3 397 38.3
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 2.0e-40 171.0 324 41.7
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.3e-39 168.3 262 44.3
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 4.9e-39 166.4 255 44.7
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 5.4e-38 162.9 308 41.9
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 4.6e-37 159.8 526 33.3
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 8.0e-34 149.1 351 38.2
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 3.7e-31 140.2 379 37.2
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 8.3e-23 112.5 120 56.7
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 1.7e-20 104.8 294 34.7
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 3.0e-20 104.0 119 51.3
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.5e-19 101.7 257 36.6
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 2.5e-11 74.3 53 71.7
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 2.5e-11 74.3 111 37.8
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 8.1e-10 69.3 130 40.0
MBI15_g07765_MAGBIO Magnolia biondii HOM05D005497 ORTHO05D006733 1.1e-09 68.9 286 27.6
ClCG05G016330 Citrullus lanatus HOM05D005497 ORTHO05D006733 2.4e-09 67.8 290 26.2
Oeu018558.1 Olea europaea HOM05D007360 ORTHO05D008235 2.4e-09 67.8 117 36.8
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 4.0e-09 67.0 110 39.1
vmacro11245 Vaccinium macrocarpon HOM05D005497 ORTHO05D006733 8.9e-09 65.9 254 26.4
PGR044G0919 Punica granatum HOM05D005497 ORTHO05D006733 1.5e-08 65.1 236 29.2
MELO3C016964.2 Cucumis melo HOM05D005497 ORTHO05D006733 2.0e-08 64.7 323 25.1
Pp3c12_23920 Physcomitrium patens HOM05D018912 ORTHO05D021275 2.6e-08 64.3 283 25.8
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 3.4e-08 63.9 337 27.0
Oeu030218.3 Olea europaea HOM05D005497 ORTHO05D006733 7.6e-08 62.8 261 26.4
Thecc.09G016200 Theobroma cacao HOM05D005497 ORTHO05D006733 1.7e-07 61.6 248 25.0
Haze_21422 Corylus avellana HOM05D005497 ORTHO05D006733 3.8e-07 60.5 285 26.3
SMO116G0351 Selaginella moellendorffii HOM05D005497 ORTHO05D006733 3.8e-07 60.5 164 34.1
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 3.8e-07 60.5 278 25.2
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 3.8e-07 60.5 239 27.2
Rhsim02G0213400 Rhododendron simsii HOM05D005497 ORTHO05D006733 1.4e-06 58.5 252 25.0
FAN15G1151 Fragaria x ananassa HOM05D005497 ORTHO05D006733 1.9e-06 58.2 241 25.7
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.4e-06 57.8 52 57.7
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 2.4e-06 57.8 52 57.7
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.4e-06 57.8 52 57.7
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.4e-06 57.8 52 57.7
AUR62021559 Chenopodium quinoa HOM05D003672 ORTHO05D004121 4.2e-06 57.0 296 24.3
AUR62008531 Chenopodium quinoa HOM05D003672 ORTHO05D004121 7.1e-06 56.2 299 25.4
Duzib168G1440 Durio zibethinus HOM05D005497 ORTHO05D006733 7.1e-06 56.2 248 25.4
Glyma.06G061800 Glycine max HOM05D005497 ORTHO05D006733 7.1e-06 56.2 253 26.9
Lalb_Chr08g0244421 Lupinus albus HOM05D005497 ORTHO05D006733 7.1e-06 56.2 262 24.4


User provided reference genes

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