Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc173.30 Carica papaya HOM05D008164 ORTHO05D010222 6.2e-76 287.3 142 100.0
Cpa.g.sc173.26 Carica papaya HOM05D008164 ORTHO05D010222 1.6e-63 246.1 142 88.0
Cpa.g.sc173.36 Carica papaya HOM05D008164 ORTHO05D010222 1.6e-63 246.1 142 88.0
Cpa.g.c34058.1 Carica papaya HOM05D008164 ORTHO05D010222 2.4e-51 205.7 123 82.9
Cpa.g.sc173.39 Carica papaya HOM05D008164 ORTHO05D010222 9.1e-51 203.8 119 84.0
Cpa.g.sc173.33 Carica papaya HOM05D008164 ORTHO05D010222 1.7e-49 199.5 117 83.8
CiPaw.05G001800 Carya illinoinensis HOM05D008164 ORTHO05D010222 1.2e-21 107.1 161 41.0
Duzib235G0793 Durio zibethinus HOM05D008164 ORTHO05D010222 1.4e-19 100.1 163 43.6
Thecc.06G017700 Theobroma cacao HOM05D008164 ORTHO05D010222 2.4e-19 99.4 156 42.9
Cfa004447 Carpinus fangiana HOM05D008164 ORTHO05D010222 1.6e-18 96.7 167 39.5
Ciclev10002734m.g Citrus clementina HOM05D008164 ORTHO05D010222 3.8e-17 92.0 163 39.3
Gohir.A05G110000 Gossypium hirsutum HOM05D008164 ORTHO05D010222 3.8e-17 92.0 160 41.2
Haze_09987 Corylus avellana HOM05D008164 ORTHO05D010222 7.2e-16 87.8 165 39.4
QL02p103286 Quercus lobata HOM05D008164 ORTHO05D010222 2.1e-15 86.3 170 37.1
TAR628G0422 Trochodendron aralioides HOM05D008164 ORTHO05D010222 3.6e-15 85.5 153 39.2
Gohir.D05G110300 Gossypium hirsutum HOM05D008164 ORTHO05D010222 1.8e-14 83.2 157 42.7
Gorai.009G114500 Gossypium raimondii HOM05D008164 ORTHO05D010222 1.8e-14 83.2 157 42.7
DCAR_003281 Daucus carota HOM05D008164 ORTHO05D010222 4.0e-14 82.0 167 37.1
Dinv29630 Davidia involucrata HOM05D000112 ORTHO05D000564 1.2e-13 80.5 162 34.6
Sp7g22250 Schrenkiella parvula HOM05D008164 ORTHO05D010222 2.0e-13 79.7 151 36.4
Manes.10G108200 Manihot esculenta HOM05D008164 ORTHO05D010222 9.8e-13 77.4 163 42.3
Prupe.1G585100 Prunus persica HOM05D008164 ORTHO05D010222 2.8e-12 75.9 184 32.6
BcaNung01134 Brassica carinata HOM05D008164 ORTHO05D010222 3.7e-12 75.5 157 36.3
PSO017G5192 Papaver somniferum HOM05D008164 ORTHO05D010222 4.9e-12 75.1 173 35.3
Atru.chr6.245 Acer truncatum HOM05D008164 ORTHO05D010222 6.3e-12 74.7 181 33.7
BolC1t01882H Brassica oleracea HOM05D008164 ORTHO05D010222 6.3e-12 74.7 156 37.2
AL7G28990 Arabidopsis lyrata HOM05D008164 ORTHO05D010222 1.8e-11 73.2 152 38.2
BraA01t01499Z Brassica rapa HOM05D008164 ORTHO05D010222 4.1e-11 72.0 155 36.8
BcaC09g50645 Brassica carinata HOM05D008164 ORTHO05D010222 5.4e-11 71.6 149 36.9
C01p22560 Brassica napus HOM05D008164 ORTHO05D010222 5.4e-11 71.6 149 36.9
BolC1t02189H Brassica oleracea HOM05D008164 ORTHO05D010222 5.4e-11 71.6 149 36.9
A01p15590 Brassica napus HOM05D008164 ORTHO05D010222 7.0e-11 71.2 155 36.8
BcaC09g50889 Brassica carinata HOM05D008164 ORTHO05D010222 9.2e-11 70.9 156 35.9
C01p19540 Brassica napus HOM05D008164 ORTHO05D010222 9.2e-11 70.9 156 35.9
Peaxi162Scf00011g00188 Petunia axillaris HOM05D008164 ORTHO05D010222 3.5e-10 68.9 178 30.3
Sc23g0003940 Simmondsia chinensis HOM05D008164 ORTHO05D010222 3.5e-10 68.9 145 36.6
CARHR231690 Cardamine hirsuta HOM05D008164 ORTHO05D010222 7.8e-10 67.8 144 36.1
Glyma.12G164000 Glycine max HOM05D008164 ORTHO05D010222 1.0e-09 67.4 144 35.4
PGSC0003DMG400038752 Solanum tuberosum HOM05D008164 ORTHO05D010222 1.0e-09 67.4 168 34.5
TWI14G0748 Tripterygium wilfordii HOM05D008164 ORTHO05D010222 1.7e-09 66.6 156 33.3
Aqoxy7G02312 Aquilegia oxysepala HOM05D008164 ORTHO05D010222 8.6e-09 64.3 172 30.2
Cc02_g23560 Coffea canephora HOM05D008164 ORTHO05D010222 1.1e-08 63.9 169 33.7
Migut.N00863 Erythranthe guttata HOM05D008164 ORTHO05D010222 1.1e-08 63.9 157 29.3
Rhsim11G0118100 Rhododendron simsii HOM05D008164 ORTHO05D010222 1.1e-08 63.9 149 30.9
Thhalv10026492m.g Eutrema salsugineum HOM05D008164 ORTHO05D010222 1.5e-08 63.5 156 32.7
ATR0580G429 Amborella trichopoda HOM05D008164 ORTHO05D010222 1.9e-08 63.2 147 34.0
Solyc01g103070.2 Solanum lycopersicum HOM05D008164 ORTHO05D010222 1.9e-08 63.2 172 32.0
AT4G24265 Arabidopsis thaliana HOM05D008164 ORTHO05D010222 2.5e-08 62.8 151 34.4
Carub.0007s1679 Capsella rubella HOM05D008164 ORTHO05D010222 2.5e-08 62.8 175 32.0
Sopen01g045480 Solanum pennellii HOM05D008164 ORTHO05D010222 2.5e-08 62.8 172 32.6
Lj5P282T61 Lonicera japonica HOM05D008164 ORTHO05D010222 7.3e-08 61.2 126 39.7
Potri.003G001200 Populus trichocarpa HOM05D008164 ORTHO05D010222 9.5e-08 60.8 166 34.9
PGR142G0304 Punica granatum HOM05D008164 ORTHO05D010222 9.5e-08 60.8 124 36.3
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.6e-07 60.1 136 40.4
Manes.07G030300 Manihot esculenta HOM05D008164 ORTHO05D010222 1.8e-06 56.6 149 32.9
MELO3C022933.2 Cucumis melo HOM05D051489 ORTHO05D044912 8.9e-06 54.3 140 34.3


User provided reference genes

Program Settings