Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc17.84 Carica papaya HOM05D004072 ORTHO05D019491 1.3e-54 216.1 101 100.0
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 7.7e-28 127.1 69 82.6
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 1.0e-27 126.7 83 73.5
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 1.7e-27 125.9 70 81.4
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 1.7e-27 125.9 69 82.6
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 1.7e-27 125.9 89 68.5
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 2.2e-27 125.6 83 72.3
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 2.9e-27 125.2 69 82.6
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 3.8e-27 124.8 83 72.3
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 6.5e-27 124.0 83 69.9
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 6.5e-27 124.0 83 68.7
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 6.5e-27 124.0 69 81.2
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 6.5e-27 124.0 69 81.2
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 8.5e-27 123.6 83 68.7
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 8.5e-27 123.6 69 81.2
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 8.5e-27 123.6 69 81.2
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 8.5e-27 123.6 69 81.2
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 1.1e-26 123.2 77 74.0
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 1.1e-26 123.2 89 67.4
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 1.1e-26 123.2 89 67.4
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 1.4e-26 122.9 83 72.3
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 1.4e-26 122.9 89 65.2
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.4e-26 122.9 83 71.1
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.9e-26 122.5 69 78.3
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 1.9e-26 122.5 69 78.3
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 1.9e-26 122.5 83 69.9
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 1.9e-26 122.5 83 69.9
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 2.5e-26 122.1 69 78.3
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 3.2e-26 121.7 83 68.7
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 3.2e-26 121.7 83 68.7
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 3.2e-26 121.7 83 68.7
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 3.2e-26 121.7 83 68.7
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 4.2e-26 121.3 83 69.9
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 4.2e-26 121.3 83 67.5
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 4.2e-26 121.3 91 64.8
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 5.5e-26 120.9 83 69.9
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 5.5e-26 120.9 69 79.7
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 5.5e-26 120.9 69 76.8
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 5.5e-26 120.9 69 79.7
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 7.2e-26 120.6 89 66.3
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 7.2e-26 120.6 83 68.7
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 7.2e-26 120.6 89 67.4
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.2e-25 119.8 83 68.7
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 1.2e-25 119.8 74 74.3
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 1.2e-25 119.8 69 76.8
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.2e-25 119.8 89 64.0
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 2.1e-25 119.0 83 66.3
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 2.1e-25 119.0 83 67.5
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 2.7e-25 118.6 91 62.6
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 2.7e-25 118.6 83 68.7
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 3.6e-25 118.2 69 76.8
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 3.6e-25 118.2 83 68.7
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 3.6e-25 118.2 69 76.8
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 4.6e-25 117.9 71 73.2
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 6.1e-25 117.5 83 66.3
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 6.1e-25 117.5 83 66.3
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 6.1e-25 117.5 83 66.3
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 6.1e-25 117.5 83 66.3
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 6.1e-25 117.5 83 66.3
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 7.9e-25 117.1 83 66.3
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 1.0e-24 116.7 69 75.4
CSS0006934 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.0e-24 116.7 82 68.3
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.0e-24 116.7 82 68.3
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 1.0e-24 116.7 83 67.5
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.0e-24 116.7 83 67.5
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.0e-24 116.7 83 67.5
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 1.0e-24 116.7 63 82.5
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 1.4e-24 116.3 83 65.1
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 1.8e-24 115.9 92 63.0
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 1.8e-24 115.9 69 75.4
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 1.8e-24 115.9 83 66.3
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 2.3e-24 115.5 69 75.4
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 2.3e-24 115.5 69 75.4
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 2.3e-24 115.5 69 75.4
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 5.1e-24 114.4 69 73.9
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 5.1e-24 114.4 69 73.9
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 5.1e-24 114.4 83 68.7
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 5.1e-24 114.4 81 67.9
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 6.7e-24 114.0 73 72.6
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 6.7e-24 114.0 69 73.9
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 8.8e-24 113.6 69 73.9
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 8.8e-24 113.6 82 67.1
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 8.8e-24 113.6 83 63.9
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 8.8e-24 113.6 77 67.5
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 1.1e-23 113.2 74 68.9
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.1e-23 113.2 83 66.3
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 1.1e-23 113.2 83 62.7
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 1.5e-23 112.8 74 68.9
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 2.0e-23 112.5 83 63.9
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 2.0e-23 112.5 74 70.3
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 3.3e-23 111.7 83 65.1
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 3.3e-23 111.7 69 73.9
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 4.3e-23 111.3 74 67.6
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 1.7e-22 109.4 74 70.3
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 8.2e-22 107.1 91 57.1
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 1.4e-21 106.3 91 56.0
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 3.1e-21 105.1 83 60.2
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 3.1e-21 105.1 83 60.2
Lj1A1163T37 Lonicera japonica HOM05D004072 ORTHO05D019491 4.1e-21 104.8 64 75.0
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 5.3e-21 104.4 89 57.3
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 1.2e-20 103.2 69 66.7
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 1.4e-18 96.3 49 89.8
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 5.1e-16 87.8 89 52.8
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 6.7e-16 87.4 74 58.1
Duzib248G0219 Durio zibethinus HOM05D004072 ORTHO05D019491 7.4e-15 84.0 58 70.7
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 2.8e-14 82.0 68 54.4
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 1.8e-13 79.3 69 50.7
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 2.6e-12 75.5 53 64.2
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 4.2e-10 68.2 36 86.1
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 2.1e-09 65.9 69 46.4
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 4.7e-09 64.7 58 46.6


User provided reference genes

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