Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc17.80 Carica papaya HOM05D004072 ORTHO05D021063 1.9e-119 433.0 291 100.0
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 1.8e-53 213.8 287 53.0
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 4.0e-45 186.0 285 49.5
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 6.8e-45 185.3 285 48.4
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 1.3e-43 181.0 285 49.8
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 4.9e-43 179.1 287 48.1
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 2.7e-41 173.3 283 47.7
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 7.8e-41 171.8 285 46.7
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 5.2e-37 159.1 287 48.4
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.7e-35 154.1 174 62.1
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 2.2e-35 153.7 288 43.1
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 2.4e-34 150.2 289 43.3
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 2.4e-34 150.2 289 44.3
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 1.2e-33 147.9 285 41.1
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 7.8e-33 145.2 275 42.2
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 1.0e-32 144.8 273 42.5
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 4.3e-31 139.4 280 45.7
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 5.6e-31 139.0 287 40.8
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 8.1e-30 135.2 288 39.9
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 3.1e-29 133.3 291 41.6
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 4.0e-29 132.9 290 42.1
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 4.0e-29 132.9 290 40.7
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 5.3e-29 132.5 298 41.6
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.2e-28 131.3 295 38.3
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 1.2e-28 131.3 266 40.2
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 1.2e-28 131.3 296 40.2
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 1.5e-28 131.0 170 53.5
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 1.5e-28 131.0 291 39.9
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 2.6e-28 130.2 290 40.7
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 3.4e-28 129.8 296 40.9
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 9.9e-28 128.3 274 40.9
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 1.3e-27 127.9 230 46.5
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 4.9e-27 125.9 288 39.2
CSS0023750 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 6.4e-27 125.6 295 41.0
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 8.4e-27 125.2 290 37.6
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 1.1e-26 124.8 285 43.9
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 2.4e-26 123.6 302 39.1
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 9.3e-26 121.7 287 38.7
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 2.7e-25 120.2 285 38.6
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 3.5e-25 119.8 290 40.7
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 3.5e-25 119.8 290 39.0
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 3.5e-25 119.8 266 42.5
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 4.6e-25 119.4 296 39.2
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 6.0e-25 119.0 286 39.9
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.3e-24 117.9 292 40.8
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 1.5e-23 114.4 297 38.0
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 1.5e-23 114.4 297 38.0
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 2.5e-23 113.6 295 38.3
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 2.5e-23 113.6 289 39.1
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 3.3e-23 113.2 296 37.2
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 9.6e-23 111.7 295 37.3
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 9.6e-23 111.7 295 37.3
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 8.1e-22 108.6 296 37.8
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 1.8e-21 107.5 302 36.4
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 3.1e-21 106.7 285 36.8
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.2e-20 104.8 295 35.6
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.5e-20 104.4 307 36.5
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 2.0e-20 104.0 297 38.7
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 2.0e-20 104.0 297 38.7
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 5.8e-20 102.4 290 36.6
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 7.6e-20 102.1 290 37.2
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 2.2e-19 100.5 305 34.8
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 4.9e-19 99.4 167 48.5
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 8.4e-19 98.6 300 33.7
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 2.7e-17 93.6 288 34.7
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 6.0e-17 92.4 286 35.7
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 1.0e-16 91.7 170 48.2
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 2.3e-16 90.5 177 47.5
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 3.0e-16 90.1 305 33.1
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 3.9e-16 89.7 305 33.1
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 5.1e-16 89.4 301 33.9
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 8.7e-16 88.6 249 38.6
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 3.3e-15 86.7 164 48.2
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 4.3e-15 86.3 307 32.6
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 4.3e-15 86.3 303 35.6
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 4.3e-15 86.3 314 32.8
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 5.6e-15 85.9 289 33.6
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 7.4e-15 85.5 310 32.6
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 7.4e-15 85.5 306 32.7
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 1.3e-14 84.7 175 45.1
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 1.6e-14 84.3 287 32.8
Actinidia36003 Actinidia chinensis HOM05D004072 ORTHO05D021063 1.4e-13 81.3 119 48.7
Glyma.09G084500 Glycine max HOM05D004072 ORTHO05D005933 1.3e-11 74.7 294 36.4
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 1.7e-11 74.3 282 32.3
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 2.2e-11 73.9 289 31.5
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 3.8e-11 73.2 175 42.3
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 1.1e-10 71.6 292 33.9
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 2.7e-09 67.0 305 32.5
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 2.7e-09 67.0 291 30.9
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 7.9e-09 65.5 286 32.9
CSS0034048 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 2.3e-08 63.9 288 31.6
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 3.3e-07 60.1 293 32.1
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 3.3e-07 60.1 174 37.9


User provided reference genes

Program Settings