Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc17.209 Carica papaya HOM05D000881 ORTHO05D000666 3.2e-84 315.1 165 100.0
QL10p015652 Quercus lobata HOM05D000881 ORTHO05D000666 2.8e-19 99.4 189 38.6
Thecc.03G079800 Theobroma cacao HOM05D000881 ORTHO05D000666 2.8e-19 99.4 175 40.0
Gohir.D12G178364 Gossypium hirsutum HOM05D000881 ORTHO05D000666 1.5e-17 93.6 175 37.1
Ciclev10021984m.g Citrus clementina HOM05D000881 ORTHO05D000666 3.4e-17 92.4 183 35.5
Gohir.A12G175310 Gossypium hirsutum HOM05D000881 ORTHO05D000666 3.4e-17 92.4 175 36.6
Duzib068G0091 Durio zibethinus HOM05D000881 ORTHO05D000666 4.5e-17 92.0 176 34.1
MD06G1188500 Malus domestica HOM05D000881 ORTHO05D000666 7.6e-17 91.3 185 39.5
Manes.14G075100 Manihot esculenta HOM05D000881 ORTHO05D000666 9.9e-17 90.9 175 39.4
Potri.015G064800 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.7e-16 90.1 159 39.6
Potri.012G070100 Populus trichocarpa HOM05D000881 ORTHO05D000666 2.9e-16 89.4 158 39.2
Gorai.008G190800 Gossypium raimondii HOM05D000881 ORTHO05D000666 4.9e-16 88.6 175 35.4
TWI60G1130 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 4.9e-16 88.6 166 34.9
Duzib068G0675 Durio zibethinus HOM05D000881 ORTHO05D000666 6.4e-16 88.2 175 37.1
Prupe.5G186800 Prunus persica HOM05D000881 ORTHO05D000666 6.4e-16 88.2 181 35.4
CiPaw.11G038600 Carya illinoinensis HOM05D000881 ORTHO05D000666 1.9e-15 86.7 157 36.9
Cc04_g15480 Coffea canephora HOM05D000881 ORTHO05D000666 3.2e-15 85.9 181 35.4
CANSAT80G1763 Cannabis sativa HOM05D000881 ORTHO05D000666 4.2e-15 85.5 174 33.3
MD14G1195100 Malus domestica HOM05D000881 ORTHO05D000666 4.2e-15 85.5 184 37.5
Lalb_Chr12g0196721 Lupinus albus HOM05D000881 ORTHO05D000666 1.2e-14 84.0 173 35.8
Thecc.03G079700 Theobroma cacao HOM05D000881 ORTHO05D000666 1.2e-14 84.0 164 36.0
Actinidia19059 Actinidia chinensis HOM05D000881 ORTHO05D000666 2.7e-14 82.8 162 35.2
Haze_07375 Corylus avellana HOM05D000881 ORTHO05D000666 1.3e-13 80.5 199 30.7
Thecc.03G079600 Theobroma cacao HOM05D000881 ORTHO05D000666 1.8e-13 80.1 169 39.1
Atru.chr9.2312 Acer truncatum HOM05D000881 ORTHO05D000666 2.3e-13 79.7 167 39.5
Ca_21846_v3 Cicer arietinum L. HOM05D000259 ORTHO05D000155 5.1e-13 78.6 164 33.5
Phvul.009G189900 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 5.1e-13 78.6 177 30.5
Lj4g0004603 Lotus japonicus HOM05D000881 ORTHO05D000666 8.7e-13 77.8 176 33.0
TWI81G0343 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 8.7e-13 77.8 173 34.7
Sabra15G0090400 Salix brachista HOM05D000136 ORTHO05D000666 2.5e-12 76.3 158 37.3
VMungo1309G1551 Vigna mungo HOM05D000881 ORTHO05D000666 2.5e-12 76.3 162 32.7
CiPaw.11G038700 Carya illinoinensis HOM05D000881 ORTHO05D000666 3.3e-12 75.9 167 32.9
Glyma.06G190600 Glycine max HOM05D000881 ORTHO05D000666 9.6e-12 74.3 185 30.8
CiPaw.11G038800 Carya illinoinensis HOM05D000881 ORTHO05D000666 2.8e-11 72.8 157 32.5
Peaxi162Scf00009g00337 Petunia axillaris HOM05D000881 ORTHO05D000666 6.2e-11 71.6 172 30.2
ECA232G2750 Erigeron canadensis HOM05D000259 ORTHO05D000155 2.4e-10 69.7 65 47.7
FAN18G0931 Fragaria x ananassa HOM05D000881 ORTHO05D000666 3.1e-10 69.3 199 32.2
Oeu022198.1 Olea europaea HOM05D000881 ORTHO05D000666 4.0e-10 68.9 167 31.7
Cfa018986 Carpinus fangiana HOM05D000881 ORTHO05D000666 6.9e-10 68.2 77 42.9
TPR.G38378 Trifolium pratense HOM05D000881 ORTHO05D000666 6.9e-10 68.2 192 29.2
Medtr4g107860 Medicago truncatula HOM05D000881 ORTHO05D000666 1.2e-09 67.4 210 28.1
arahy.Tifrunner.gnm1.ann1.IYC01E Arachis hypogaea HOM05D000881 ORTHO05D000666 2.0e-09 66.6 187 29.9
VMungo1215G2490 Vigna mungo HOM05D000259 ORTHO05D000155 2.0e-09 66.6 210 28.6
FAN04G1140 Fragaria x ananassa HOM05D000881 ORTHO05D000666 2.6e-09 66.2 212 30.7
FAN13G2453 Fragaria x ananassa HOM05D000881 ORTHO05D000666 3.4e-09 65.9 212 30.2
HanXRQChr16g0503201 Helianthus annuus HOM05D000881 ORTHO05D000666 3.4e-09 65.9 186 28.0
Sopen03g032240 Solanum pennellii HOM05D000881 ORTHO05D000666 3.4e-09 65.9 160 33.8
Glyma.05G029500 Glycine max HOM05D000881 ORTHO05D000666 4.5e-09 65.5 186 28.5
Glyma.17G097400 Glycine max HOM05D000881 ORTHO05D000666 4.5e-09 65.5 205 30.2
FvH4_5g15440 Fragaria vesca HOM05D000881 ORTHO05D000666 7.6e-09 64.7 199 30.7
HanXRQChr09g0271101 Helianthus annuus HOM05D000881 ORTHO05D000666 1.0e-08 64.3 67 41.8
MD14G1194900 Malus domestica HOM05D000881 ORTHO05D000666 1.0e-08 64.3 79 49.4
Eucgr.K02451 Eucalyptus grandis HOM05D000881 ORTHO05D000666 1.3e-08 63.9 159 32.1
PGSC0003DMG400025350 Solanum tuberosum HOM05D000881 ORTHO05D000666 1.7e-08 63.5 166 31.9
Zm00001eb052730 Zea mays HOM05D000881 ORTHO05D000666 1.7e-08 63.5 63 44.4
Duzib205G0669 Durio zibethinus HOM05D000881 ORTHO05D000666 2.9e-08 62.8 141 33.3
arahy.Tifrunner.gnm1.ann1.1N783C Arachis hypogaea HOM05D000881 ORTHO05D000666 3.8e-08 62.4 188 31.4
Solyc03g113180.3 Solanum lycopersicum HOM05D000881 ORTHO05D000666 3.8e-08 62.4 163 31.3
RcHm_v2.0_Chr7g0180641 Rosa chinensis HOM05D000881 ORTHO05D000666 4.9e-08 62.0 219 26.9
Aqoxy3G03278 Aquilegia oxysepala HOM05D000881 ORTHO05D000666 8.4e-08 61.2 83 37.3
HanXRQChr16g0503171 Helianthus annuus HOM05D000881 ORTHO05D000666 1.9e-07 60.1 203 27.6
Lsat_1_v5_gn_4_107421 Lactuca sativa HOM05D000881 ORTHO05D000666 1.9e-07 60.1 189 30.2
Actinidia34978 Actinidia chinensis HOM05D000881 ORTHO05D000666 2.5e-07 59.7 106 30.2
CSS0047115 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 4.2e-07 58.9 214 26.2
Phvul.003G192400 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 4.2e-07 58.9 207 28.5
Dinv19919 Davidia involucrata HOM05D000881 ORTHO05D000666 5.5e-07 58.5 92 35.9
DCAR_016535 Daucus carota HOM05D000881 ORTHO05D000666 9.3e-07 57.8 192 31.2
Atru.chr9.2311 Acer truncatum HOM05D000881 ORTHO05D000666 1.2e-06 57.4 167 32.3
vmacro16567 Vaccinium macrocarpon HOM05D000881 ORTHO05D000666 1.2e-06 57.4 60 48.3
Nitab4.5_0018311g0010 Nicotiana tabacum HOM05D000881 ORTHO05D000666 2.7e-06 56.2 73 39.7
SalBow5G4899 Salvia bowleyana HOM05D000881 ORTHO05D000666 2.7e-06 56.2 163 27.0
PGSC0003DMG400002009 Solanum tuberosum HOM05D000881 ORTHO05D000666 2.7e-06 56.2 120 33.3
Nitab4.5_0000615g0070 Nicotiana tabacum HOM05D000881 ORTHO05D000666 3.5e-06 55.8 62 43.5
Psat4g053640 Pisum sativum HOM05D000881 ORTHO05D000666 3.5e-06 55.8 226 25.7
PSO832G1594 Papaver somniferum HOM05D000881 ORTHO05D000666 4.6e-06 55.5 79 35.4
PSO591G0061 Papaver somniferum HOM05D000881 ORTHO05D000666 6.0e-06 55.1 79 35.4
Sopen03g032230 Solanum pennellii HOM05D000881 ORTHO05D000666 6.0e-06 55.1 144 31.9
CDE10G0818 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 7.9e-06 54.7 62 40.3
MBI11_g07704_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 7.9e-06 54.7 70 40.0
MBI14_g12734_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 7.9e-06 54.7 63 39.7
Nn4g23057 Nelumbo nucifera HOM05D000881 ORTHO05D000666 7.9e-06 54.7 65 40.0
Peaxi162Scf00647g00136 Petunia axillaris HOM05D000881 ORTHO05D000666 7.9e-06 54.7 63 39.7
Zm00001eb218280 Zea mays HOM05D000881 ORTHO05D000666 7.9e-06 54.7 66 34.8


User provided reference genes

Program Settings