Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 7.1e-93 344.0 179 100.0
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 3.2e-37 159.1 173 53.2
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 7.2e-37 157.9 173 53.8
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 3.6e-36 155.6 181 54.1
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 1.4e-35 153.7 181 55.2
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.8e-35 153.3 181 53.6
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.8e-35 153.3 181 54.1
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 1.1e-34 150.6 173 56.1
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.5e-34 150.2 174 52.9
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 1.5e-34 150.2 181 54.1
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 8.2e-33 144.4 173 52.0
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 1.8e-32 143.3 173 51.4
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 1.8e-32 143.3 175 53.1
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 4.5e-31 138.7 174 52.9
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.0e-30 137.5 178 50.0
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 2.9e-30 136.0 133 56.4
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 3.8e-30 135.6 135 54.1
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 3.8e-30 135.6 149 55.7
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 5.0e-30 135.2 172 51.2
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 6.5e-30 134.8 178 49.4
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 5.5e-29 131.7 139 51.1
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 5.5e-29 131.7 185 47.6
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 9.4e-29 131.0 160 48.1
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 1.6e-28 130.2 149 53.0
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 1.6e-28 130.2 145 52.4
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 1.6e-28 130.2 139 52.5
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 1.6e-28 130.2 119 61.3
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 2.7e-28 129.4 120 56.7
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 2.7e-28 129.4 178 50.6
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 4.7e-28 128.6 160 47.5
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 4.7e-28 128.6 137 54.0
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 8.0e-28 127.9 120 55.0
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 8.0e-28 127.9 120 56.7
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 1.0e-27 127.5 120 55.8
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 1.0e-27 127.5 120 55.8
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 1.4e-27 127.1 130 54.6
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 1.4e-27 127.1 174 48.9
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 1.4e-27 127.1 119 60.5
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 3.9e-27 125.6 152 48.0
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 2.0e-26 123.2 144 52.8
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 2.6e-26 122.9 173 49.1
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 4.4e-26 122.1 118 56.8
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.3e-25 120.6 173 48.6
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 1.7e-25 120.2 118 55.1
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 1.7e-25 120.2 139 48.2
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 2.2e-25 119.8 125 57.6
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 3.7e-25 119.0 127 55.9
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 1.4e-24 117.1 148 49.3
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 2.4e-24 116.3 144 49.3
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 7.0e-24 114.8 149 48.3
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 2.0e-23 113.2 184 46.2
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 3.5e-23 112.5 204 39.2
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 1.3e-22 110.5 117 50.4
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 1.7e-22 110.2 164 46.3
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 6.5e-22 108.2 124 51.6
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.1e-21 107.5 181 41.4
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.9e-21 106.7 179 41.9
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 1.9e-21 106.7 131 50.4
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 3.2e-21 105.9 128 51.6
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 3.2e-21 105.9 111 49.5
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 4.2e-21 105.5 111 49.5
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 1.2e-20 104.0 112 49.1
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 1.2e-20 104.0 121 52.1
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 1.2e-20 104.0 122 53.3
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 1.6e-20 103.6 162 42.6
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 2.1e-20 103.2 142 48.6
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 2.7e-20 102.8 178 42.1
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 2.7e-20 102.8 137 51.1
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 2.7e-20 102.8 137 49.6
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 2.7e-20 102.8 124 49.2
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 4.7e-20 102.1 129 50.4
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 1.8e-19 100.1 90 62.2
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 2.3e-19 99.8 126 50.8
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 5.2e-19 98.6 146 47.3
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.8e-19 98.2 110 53.6
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 8.8e-19 97.8 107 50.5
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 2.6e-18 96.3 103 51.5
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 4.4e-18 95.5 152 41.4
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 1.7e-17 93.6 155 38.7
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 1.7e-17 93.6 100 50.0
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 2.2e-17 93.2 125 47.2
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 3.7e-17 92.4 152 40.8
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 3.7e-17 92.4 150 42.0
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 3.7e-17 92.4 150 39.3
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 4.8e-17 92.0 119 47.1
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.1e-16 90.9 133 45.1
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 1.8e-16 90.1 129 44.2
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 1.8e-16 90.1 149 39.6
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 1.6e-15 87.0 149 38.9
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 1.6e-15 87.0 119 41.2
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 2.7e-15 86.3 149 38.9
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 3.5e-15 85.9 115 44.3
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 5.9e-15 85.1 146 37.7
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 2.9e-14 82.8 149 36.2
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 5.0e-14 82.0 101 45.5
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 2.5e-13 79.7 123 39.8
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 4.2e-13 79.0 150 36.0
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 2.7e-12 76.3 99 42.4
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 1.4e-08 63.9 74 47.3
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 2.0e-07 60.1 124 32.3
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 2.7e-07 59.7 117 32.5
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 1.3e-06 57.4 64 43.8


User provided reference genes

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