Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc166.3 Carica papaya HOM05D000002 ORTHO05D000047 5.9e-55 217.2 106 100.0
Cpa.g.sc23.134 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-41 171.8 118 75.4
Cpa.g.sc118.36 Carica papaya HOM05D000002 ORTHO05D000047 8.9e-35 150.2 149 58.4
Cpa.g.sc153.13 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-33 145.2 149 57.0
Cpa.g.sc11.149 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-29 133.3 143 55.2
Cpa.g.sc67.11 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-29 131.3 141 54.6
Cpa.g.sc63.36 Carica papaya HOM05D000002 ORTHO05D000047 8.0e-28 127.1 149 48.3
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 4.9e-25 117.9 149 47.0
Cpa.g.sc39.115 Carica papaya HOM05D000002 ORTHO05D000047 4.1e-24 114.8 144 47.9
Cpa.g.sc97.54 Carica papaya HOM05D000002 ORTHO05D000047 6.0e-23 110.9 146 43.8
Cpa.g.sc12.50 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-21 104.8 114 51.8
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 6.2e-20 100.9 122 45.9
Cpa.g.sc89.20 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-19 98.6 141 41.8
Cpa.g.sc44.5 Carica papaya HOM05D000002 ORTHO05D000047 6.8e-19 97.4 136 40.4
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-18 95.5 146 38.4
Cpa.g.sc96.44 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-18 95.5 149 40.3
Hma1.2p1_0421F.1_g149900 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-18 95.1 112 46.4
Cpa.g.sc94.40 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-18 94.0 66 69.7
Cpa.g.sc130.28 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-17 92.8 149 40.3
Cpa.g.sc54.39 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-17 92.4 149 39.6
Cpa.g.sc7.9 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-17 92.0 137 41.6
Cpa.g.sc135.31 Carica papaya HOM05D000002 ORTHO05D000047 3.7e-17 91.7 66 63.6
Cpa.g.sc91.67 Carica papaya HOM05D000002 ORTHO05D000047 3.7e-17 91.7 141 42.6
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-16 90.1 111 45.0
Cpa.g.sc32.62 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-16 89.7 106 45.3
Cpa.g.sc102.25 Carica papaya HOM05D007148 ORTHO05D009047 3.2e-16 88.6 140 37.1
Cpa.g.sc10.7 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-16 87.8 149 36.9
Cpa.g.sc81.61 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-16 87.8 129 41.9
Cpa.g.sc1639.1 Carica papaya HOM05D000002 ORTHO05D000047 9.2e-16 87.0 102 49.0
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-15 86.7 112 46.4
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-15 86.7 133 41.4
Cpa.g.sc159.30 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-15 85.9 148 36.5
Cpa.g.sc47.72 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-15 85.5 62 62.9
Cpa.g.sc22.53 Carica papaya HOM05D000002 ORTHO05D000047 3.5e-15 85.1 112 43.8
Cpa.g.sc7.46 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-14 83.6 59 67.8
Cpa.g.sc22.85 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-14 83.2 103 43.7
Cpa.g.sc34.27 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-14 82.4 66 60.6
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 3.9e-14 81.6 138 38.4
Cpa.g.sc7.140 Carica papaya HOM05D000002 ORTHO05D000047 3.9e-14 81.6 66 59.1
Cpa.g.sc29.27 Carica papaya HOM05D000002 ORTHO05D000047 5.1e-14 81.3 116 41.4
Cpa.g.sc33.192 Carica papaya HOM05D001633 ORTHO05D006978 8.6e-14 80.5 66 57.6
Cpa.g.sc118.38 Carica papaya HOM05D000190 ORTHO05D000113 1.5e-13 79.7 66 57.6
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-13 79.7 113 40.7
Cpa.g.sc44.34 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-13 79.0 66 60.6
Cpa.g.sc82.52 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-13 79.0 66 57.6
Cpa.g.sc1889.1 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-13 77.8 106 42.5
Cpa.g.sc35.42 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-13 77.8 65 58.5
Cpa.g.sc103.51 Carica papaya HOM05D000002 ORTHO05D000047 7.3e-13 77.4 65 55.4
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-12 76.3 146 34.2
Cpa.g.sc118.22 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-12 75.1 66 54.5
Cpa.g.sc49.88 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-12 75.1 63 54.0
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-12 75.1 113 38.9
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-12 75.1 113 37.2
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-12 75.1 113 37.2
Cpa.g.sc272.7 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-11 73.6 67 56.7
Cpa.g.sc301.4 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-11 73.6 133 36.1
Cpa.g.sc72.7 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-11 73.6 66 60.6
Cpa.g.sc91.54 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-11 73.2 56 58.9
Cpa.g.sc94.33 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-11 72.8 135 34.1
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-11 72.0 112 36.6
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-11 72.0 112 36.6
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-11 72.0 112 36.6
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-11 72.0 112 36.6
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-11 72.0 112 36.6
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-11 72.0 112 36.6
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 3.1e-11 72.0 136 35.3
Cpa.g.sc28.127 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-11 72.0 141 36.2
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 3.1e-11 72.0 112 36.6
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 4.0e-11 71.6 139 33.8
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-11 71.6 113 38.1
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-11 71.2 112 36.6
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-11 71.2 112 36.6
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.2e-11 71.2 112 36.6
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-11 71.2 112 36.6
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-11 71.2 112 36.6
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-11 71.2 112 36.6
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-11 71.2 112 36.6
Cpa.g.sc155.19 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-11 71.2 94 44.7
Cpa.g.sc284.12 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-11 71.2 93 40.9
CiPaw.11G071100 Carya illinoinensis HOM05D000002 ORTHO05D000047 5.2e-11 71.2 110 37.3
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.8e-11 70.9 136 31.6
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-11 70.5 112 35.7
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 70.5 112 36.6
Cpa.g.sc30.156 Carica papaya HOM05D000002 ORTHO05D000047 8.9e-11 70.5 105 41.9
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.9e-11 70.5 113 37.2
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-10 70.1 112 36.6
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-10 69.7 112 35.7
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-10 69.7 112 36.6
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 1.5e-10 69.7 113 34.5
Cpa.g.sc191.10 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-10 68.9 98 41.8
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-10 68.6 98 42.9
Cpa.g.sc67.75 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-10 68.6 56 58.9
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 3.4e-10 68.6 144 27.8
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.4e-10 68.2 113 36.3
Eucgr.B01039 Eucalyptus grandis HOM05D000002 ORTHO05D000047 7.6e-10 67.4 113 35.4
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-10 67.4 112 35.7
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-10 67.4 110 35.5
Lj3g0012381 Lotus japonicus HOM05D000002 ORTHO05D000047 9.9e-10 67.0 81 44.4
Cpa.g.sc11.47 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-09 65.9 88 42.0
Cpa.g.sc159.29 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-09 65.5 66 51.5
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.8e-09 65.1 80 43.8
Cpa.g.sc1317.1 Carica papaya HOM05D000002 ORTHO05D000047 8.4e-09 63.9 68 50.0
Cpa.g.sc34.28 Carica papaya HOM05D000002 ORTHO05D000047 8.4e-09 63.9 59 57.6
Cpa.g.sc3.387 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-08 63.2 66 50.0
Cpa.g.sc0.122 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-08 62.0 66 50.0
Cpa.g.sc10.272 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-08 62.0 86 39.5
Cpa.g.sc161.16 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-08 62.0 68 44.1
Cpa.g.sc17.60 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-08 62.0 96 39.6
Cpa.g.sc67.42 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-08 62.0 42 69.0
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.2e-08 62.0 150 30.0
Cpa.g.sc176.8 Carica papaya HOM05D000002 ORTHO05D000047 7.1e-08 60.8 66 48.5
Cpa.g.sc301.6 Carica papaya HOM05D000002 ORTHO05D000047 9.2e-08 60.5 66 47.0
Cpa.g.sc25.135 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-07 60.1 66 48.5
Cpa.g.sc36.35 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-07 60.1 66 47.0
Cpa.g.sc56.27 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-07 60.1 67 44.8
Cpa.g.sc5.114 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-07 59.7 42 66.7
Cpa.g.sc24.62 Carica papaya HOM05D008870 ORTHO05D010906 2.1e-07 59.3 103 36.9
Cpa.g.sc614.1 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-07 59.3 40 72.5
Cpa.g.sc98.51 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-07 59.3 66 48.5
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.1e-07 59.3 112 30.4
Cpa.g.sc10.10 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-07 58.9 114 36.0
Cpa.g.sc126.7 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-07 58.9 42 61.9
Cpa.g.sc25.54 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-07 58.9 88 37.5
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 3.5e-07 58.5 66 47.0
Atru.chr9.342 Acer truncatum HOM05D000002 ORTHO05D000047 4.6e-07 58.2 114 29.8
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 4.6e-07 58.2 105 37.1
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 6.0e-07 57.8 42 66.7
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 7.8e-07 57.4 49 55.1
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 7.8e-07 57.4 150 28.0
Cpa.g.sc1241.3 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-06 57.0 40 65.0
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-06 57.0 42 64.3
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-06 57.0 42 57.1
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-06 57.0 122 31.1
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-06 56.6 42 57.1
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-06 56.6 42 59.5
Cpa.g.sc10.112 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-06 56.2 66 47.0
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-06 56.2 42 64.3
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-06 56.2 112 32.1
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-06 56.2 112 32.1
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.7e-06 56.2 148 28.4
Cpa.g.sc5.32 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-06 55.8 41 65.9
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-06 55.8 42 54.8
Hma1.2p1_0647F.1_g195010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-06 55.1 30 80.0
Cpa.g.sc867.1 Carica papaya HOM05D000002 ORTHO05D000047 5.1e-06 54.7 102 36.3
ClCG04G004600 Citrullus lanatus HOM05D011088 ORTHO05D000001 5.1e-06 54.7 79 31.6
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 54.7 112 32.1
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 54.7 42 54.8
Cpa.g.sc232.2 Carica papaya HOM05D000002 ORTHO05D000047 6.6e-06 54.3 101 31.7
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 6.6e-06 54.3 36 72.2
Cpa.g.sc7.141 Carica papaya HOM05D000002 ORTHO05D000047 6.6e-06 54.3 42 59.5
Cpa.g.sc88.21 Carica papaya HOM05D045653 ORTHO05D000047 6.6e-06 54.3 107 34.6
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-06 54.3 42 54.8
HPP92_005074 Vanilla planifolia HOM05D000002 ORTHO05D000047 8.6e-06 53.9 70 34.3


User provided reference genes

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