Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 8.1e-225 783.5 414 100.0
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 1.8e-128 463.4 338 72.8
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 3.2e-128 462.6 338 72.5
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 9.2e-128 461.1 307 77.9
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 6.6e-126 454.9 307 78.8
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 6.6e-126 454.9 335 71.3
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 1.9e-125 453.4 307 76.9
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 1.6e-124 450.3 307 76.5
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 6.2e-124 448.4 340 70.9
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 5.2e-123 445.3 338 69.2
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 1.5e-122 443.7 311 74.6
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.0e-122 443.4 307 75.2
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 2.6e-122 443.0 338 70.4
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 3.4e-122 442.6 304 76.6
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 9.8e-122 441.0 307 74.9
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 2.2e-121 439.9 338 68.9
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 2.2e-121 439.9 338 68.9
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.2e-120 436.0 307 74.3
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 5.4e-120 435.3 307 72.6
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.1e-117 427.6 308 72.1
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 1.1e-117 427.6 304 75.7
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 1.9e-117 426.8 308 72.4
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 4.3e-117 425.6 334 67.4
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 9.5e-117 424.5 308 71.4
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 2.8e-116 422.9 334 68.6
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 1.8e-115 420.2 331 70.4
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 2.3e-115 419.9 307 73.3
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 3.1e-115 419.5 306 74.8
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 6.8e-115 418.3 307 70.4
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 2.0e-114 416.8 306 70.9
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 4.4e-114 415.6 308 70.8
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 5.8e-114 415.2 307 70.0
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 2.2e-113 413.3 334 64.7
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 6.4e-113 411.8 307 70.4
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 1.9e-112 410.2 307 70.0
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.9e-112 410.2 307 68.7
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 7.1e-112 408.3 334 65.6
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 2.1e-111 406.8 308 69.5
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 3.0e-110 402.9 308 70.5
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 5.1e-110 402.1 306 68.3
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 4.3e-109 399.1 274 75.9
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 4.3e-109 399.1 304 69.4
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.6e-108 397.1 361 60.7
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 1.6e-108 397.1 305 68.5
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 2.8e-108 396.4 308 69.5
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 6.2e-108 395.2 307 67.8
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 8.1e-108 394.8 307 68.4
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 1.8e-107 393.7 307 68.7
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 3.1e-107 392.9 335 63.6
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 2.0e-106 390.2 306 66.0
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.0e-106 390.2 262 76.0
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 2.0e-106 390.2 304 67.4
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 3.4e-106 389.4 304 67.4
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 4.4e-106 389.0 293 70.0
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 5.8e-106 388.7 307 68.1
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 1.3e-105 387.5 307 67.4
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 1.3e-105 387.5 304 67.1
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 2.2e-105 386.7 308 67.2
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 2.2e-105 386.7 308 67.2
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 2.9e-105 386.3 338 63.9
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 2.9e-105 386.3 308 69.2
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 3.8e-105 386.0 308 67.5
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 4.9e-105 385.6 308 67.5
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 6.4e-105 385.2 303 66.3
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 1.1e-104 384.4 307 65.5
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 1.4e-104 384.0 306 66.7
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 4.1e-104 382.5 306 66.3
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 1.2e-103 380.9 304 66.4
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 1.6e-103 380.6 308 65.6
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 2.3e-102 376.7 308 65.6
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 5.1e-102 375.6 314 64.3
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 6.2e-100 368.6 344 59.3
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 3.1e-99 366.3 312 63.8
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 5.2e-99 365.5 320 63.1
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 2.9e-97 359.8 307 64.8
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 7.1e-96 355.1 286 65.0
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 1.7e-94 350.5 307 63.2
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.7e-94 350.5 304 59.9
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 2.5e-93 346.7 305 64.6
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 1.3e-92 344.4 343 56.6
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 1.7e-89 334.0 307 57.3
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 2.1e-87 327.0 342 51.8
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 9.6e-85 318.2 267 63.7
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 6.2e-84 315.5 307 55.7
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 2.0e-82 310.5 309 55.7
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.5e-82 309.3 306 57.5
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 7.6e-82 308.5 304 57.6
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 2.7e-71 273.5 147 100.0
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 1.1e-69 268.1 304 49.7
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 3.7e-68 263.1 327 49.8
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 5.9e-58 229.2 177 67.2
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 6.1e-55 219.2 171 64.9
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 3.9e-54 216.5 154 74.0
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 3.7e-52 209.9 172 64.5
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 8.2e-52 208.8 169 61.5
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 2.0e-50 204.1 134 80.6
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 7.7e-50 202.2 236 51.7
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 1.0e-49 201.8 172 57.6
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 1.3e-49 201.4 167 63.5
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 5.0e-49 199.5 134 79.1
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.7e-47 193.7 168 59.5
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 8.8e-46 188.7 168 58.9
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 1.5e-45 188.0 176 57.4
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.7e-44 184.5 150 64.7
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 3.7e-44 183.3 173 59.0
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 2.9e-41 173.7 274 42.3
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 2.9e-41 173.7 107 82.2
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 1.5e-40 171.4 151 58.3
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 8.0e-39 165.6 160 53.8
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 1.4e-38 164.9 172 50.0
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 1.3e-36 158.3 107 77.6
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 2.8e-36 157.1 151 56.3
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 1.3e-33 148.3 171 46.2
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 3.4e-29 133.7 306 37.6
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 1.8e-27 127.9 127 60.6
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 7.0e-27 125.9 154 47.4
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 1.3e-25 121.7 102 64.7
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 6.5e-25 119.4 69 91.3
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 4.0e-22 110.2 77 74.0
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 7.5e-21 105.9 89 59.6
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 1.8e-19 101.3 142 45.1
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 5.4e-19 99.8 63 76.2
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 6.6e-17 92.8 88 59.1


User provided reference genes

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