Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1651.1 Carica papaya HOM05D000002 ORTHO05D001134 6.7e-26 119.8 55 100.0
Cpa.g.sc495.1 Carica papaya HOM05D000002 ORTHO05D001134 2.4e-15 84.7 55 67.3
Cpa.g.sc76.1 Carica papaya HOM05D000002 ORTHO05D001134 5.8e-14 80.1 51 68.6
Cpa.g.sc4.185 Carica papaya HOM05D000002 ORTHO05D001134 1.6e-11 72.0 55 58.2
Cpa.g.sc2244.1 Carica papaya HOM05D000002 ORTHO05D001134 3.5e-11 70.9 56 60.7
Cpa.g.sc20.178 Carica papaya HOM05D000002 ORTHO05D001134 7.9e-11 69.7 49 63.3
Cpa.g.sc123.1 Carica papaya HOM05D000002 ORTHO05D001134 1.0e-10 69.3 44 65.9
Ah.03g146900 Amaranthus hybridus HOM05D000002 ORTHO05D001134 4.3e-09 63.9 55 54.5
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.3e-09 63.9 56 51.8
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.3e-09 63.9 56 51.8
CANSAT01G3173 Cannabis sativa HOM05D000002 ORTHO05D001134 4.3e-09 63.9 56 53.6
CANSAT54G1705 Cannabis sativa HOM05D000009 ORTHO05D001134 4.3e-09 63.9 56 53.6
CANSAT64G0791 Cannabis sativa HOM05D000002 ORTHO05D001134 4.3e-09 63.9 56 53.6
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.4e-09 63.2 56 51.8
CANSAT01G2557 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-09 63.2 56 51.8
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.4e-09 63.2 56 51.8
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 1.6e-08 62.0 56 48.2
EL10Ac7g17233 Beta vulgaris HOM05D000002 ORTHO05D001134 2.2e-08 61.6 55 47.3
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.2e-08 61.6 56 51.8
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 2.2e-08 61.6 56 48.2
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 2.8e-08 61.2 56 48.2
Atru.chr13.1874 Acer truncatum HOM05D000002 ORTHO05D001134 6.3e-08 60.1 56 50.0
Atru.chr4.721 Acer truncatum HOM05D000002 ORTHO05D001134 6.3e-08 60.1 56 50.0
Atru.chr11.404 Acer truncatum HOM05D000002 ORTHO05D001134 8.2e-08 59.7 59 50.8
CANSAT35G1793 Cannabis sativa HOM05D000004 ORTHO05D000002 8.2e-08 59.7 55 52.7
Sabra18G0065300 Salix brachista HOM05D000002 ORTHO05D001134 8.2e-08 59.7 56 46.4
CANSAT01G2684 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-07 58.2 56 46.4
CANSAT56G1418 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-07 58.2 56 46.4
CANSAT56G3404 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-07 58.2 56 46.4
CANSAT64G0883 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-07 58.2 56 46.4
CANSAT35G0560 Cannabis sativa HOM05D000002 ORTHO05D001134 3.1e-07 57.8 56 46.4
CANSAT56G2162 Cannabis sativa HOM05D000002 ORTHO05D001134 3.1e-07 57.8 56 46.4
CANSAT80G1091 Cannabis sativa HOM05D000002 ORTHO05D001134 3.1e-07 57.8 56 46.4
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 3.1e-07 57.8 56 44.6
Sabra11G0075700 Salix brachista HOM05D000002 ORTHO05D001134 3.1e-07 57.8 56 44.6
Dinv01219 Davidia involucrata HOM05D000002 ORTHO05D000001 4.1e-07 57.4 56 46.4
AL85U10020 Arabidopsis lyrata HOM05D000587 ORTHO05D001561 5.3e-07 57.0 56 44.6
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 5.3e-07 57.0 56 46.4
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 5.3e-07 57.0 56 46.4
Atru.chr13.1760 Acer truncatum HOM05D000002 ORTHO05D001134 6.9e-07 56.6 56 46.4
CANSAT01G0629 Cannabis sativa HOM05D000002 ORTHO05D001134 1.5e-06 55.5 56 46.4
ECA232G4604 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 55.5 55 41.8
CANSAT21G1843 Cannabis sativa HOM05D000002 ORTHO05D001134 2.0e-06 55.1 56 42.9
MD02G1100700 Malus domestica HOM05D000002 ORTHO05D001134 2.6e-06 54.7 55 41.8
MD08G1232100 Malus domestica HOM05D000002 ORTHO05D001134 2.6e-06 54.7 55 43.6
ECA247G2898 Erigeron canadensis HOM05D000002 ORTHO05D001134 3.4e-06 54.3 55 38.2
PSO170G5459 Papaver somniferum HOM05D000002 ORTHO05D001134 3.4e-06 54.3 54 44.4
PSO782G2391 Papaver somniferum HOM05D000002 ORTHO05D001134 3.4e-06 54.3 56 44.6
CiPaw.11G084200 Carya illinoinensis HOM05D000124 ORTHO05D001134 4.5e-06 53.9 56 44.6
ECA236G2821 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-06 53.9 55 41.8
SEGI_14493 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 53.5 56 46.4
THA.LOC104803468 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 7.7e-06 53.1 55 47.3
ECA240G3666 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-05 52.8 55 40.0
ECA246G2881 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-05 52.8 55 40.0
RcHm_v2.0_Chr5g0001181 Rosa chinensis HOM05D000002 ORTHO05D001134 1.0e-05 52.8 54 40.7
RcHm_v2.0_Chr5g0076631 Rosa chinensis HOM05D000002 ORTHO05D001134 1.0e-05 52.8 54 40.7


User provided reference genes

Program Settings