Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 5.8e-92 340.9 175 100.0
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 4.6e-28 128.6 194 46.4
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.5e-26 123.6 192 44.3
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 4.4e-23 112.1 197 41.6
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.7e-22 110.2 176 44.3
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.7e-22 110.2 189 41.8
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 8.3e-22 107.8 191 43.5
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 1.9e-21 106.7 199 39.7
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 2.4e-21 106.3 171 48.0
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 4.1e-21 105.5 186 44.1
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 4.1e-21 105.5 196 41.8
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.4e-21 105.1 187 42.2
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.4e-21 105.1 187 42.2
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 5.4e-21 105.1 187 42.2
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 3.5e-20 102.4 184 45.1
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 4.6e-20 102.1 197 42.1
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 7.8e-20 101.3 197 42.1
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 1.0e-19 100.9 179 42.5
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 1.3e-19 100.5 193 41.5
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 1.7e-19 100.1 186 41.4
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.3e-19 99.8 195 41.0
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 3.0e-19 99.4 183 41.5
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 3.9e-19 99.0 189 40.2
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 5.1e-19 98.6 186 44.1
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 6.6e-19 98.2 198 39.9
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 6.6e-19 98.2 195 39.5
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 1.5e-18 97.1 185 42.7
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.5e-18 96.3 189 42.3
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 5.6e-18 95.1 198 39.4
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 7.3e-18 94.7 170 44.1
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 7.3e-18 94.7 180 39.4
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 9.5e-18 94.4 183 40.4
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 9.5e-18 94.4 199 37.2
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 1.2e-17 94.0 191 43.5
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.6e-17 93.6 186 38.7
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 2.8e-17 92.8 197 39.6
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 2.3e-16 89.7 194 38.7
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 3.1e-16 89.4 194 38.1
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 5.2e-16 88.6 185 37.3
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 6.8e-16 88.2 189 38.6
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 8.9e-16 87.8 185 39.5
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.2e-15 87.4 182 40.1
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 2.6e-15 86.3 213 35.7
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.7e-14 83.6 192 37.5
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.7e-14 83.6 192 37.0
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.7e-14 82.4 178 35.4
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 4.9e-14 82.0 181 40.9
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 1.9e-13 80.1 120 43.3
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 7.1e-13 78.2 201 35.8
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 4.6e-12 75.5 188 36.7
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 1.7e-11 73.6 181 36.5
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 3.0e-11 72.8 190 33.2
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 1.5e-10 70.5 170 35.3
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 4.3e-10 68.9 179 35.2
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 1.2e-09 67.4 132 37.9
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 2.1e-09 66.6 171 33.9
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 3.6e-09 65.9 164 32.3
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 4.7e-09 65.5 193 35.2
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 1.1e-08 64.3 53 64.2
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 3.1e-08 62.8 162 30.9
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 4.0e-08 62.4 180 35.6
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 1.2e-07 60.8 170 33.5
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 2.6e-07 59.7 197 31.0
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 3.4e-07 59.3 167 30.5
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 4.4e-07 58.9 172 32.6
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 7.6e-07 58.2 188 32.4
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.3e-06 57.4 175 32.6
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 1.7e-06 57.0 219 29.2
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 1.7e-06 57.0 192 29.7
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 2.2e-06 56.6 199 32.2
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 3.8e-06 55.8 169 29.0
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 3.8e-06 55.8 174 31.6
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 4.9e-06 55.5 165 32.7
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 4.9e-06 55.5 185 33.5
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 6.4e-06 55.1 177 33.3
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 8.4e-06 54.7 201 28.4


User provided reference genes

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