Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc164.15 Carica papaya HOM05D004756 ORTHO05D005793 1.8e-23 111.7 55 100.0
Cc05_g09050 Coffea canephora HOM05D004756 ORTHO05D005793 1.3e-21 105.5 55 92.7
Nn2g12710 Nelumbo nucifera HOM05D004756 ORTHO05D005793 1.3e-21 105.5 55 94.5
PGR142G3409 Punica granatum HOM05D004756 ORTHO05D005793 3.8e-21 104.0 55 92.7
Dinv06277 Davidia involucrata HOM05D004756 ORTHO05D005793 4.9e-21 103.6 55 92.7
Glyma.04G156000 Glycine max HOM05D004756 ORTHO05D005793 4.9e-21 103.6 55 92.7
Manes.07G069500 Manihot esculenta HOM05D004756 ORTHO05D005793 4.9e-21 103.6 55 92.7
Phvul.011G079900 Phaseolus vulgaris HOM05D004756 ORTHO05D005793 4.9e-21 103.6 55 92.7
Potri.019G014000 Populus trichocarpa HOM05D004756 ORTHO05D005793 4.9e-21 103.6 55 92.7
TAR636G3098 Trochodendron aralioides HOM05D004756 ORTHO05D005793 4.9e-21 103.6 55 92.7
VMungo1127G1235 Vigna mungo HOM05D000724 ORTHO05D000755 6.5e-21 103.2 55 90.9
Lalb_Chr08g0234301 Lupinus albus HOM05D004756 ORTHO05D005793 8.4e-21 102.8 55 92.7
CiPaw.07G070600 Carya illinoinensis HOM05D004756 ORTHO05D005793 1.1e-20 102.4 54 92.6
Ciclev10020437m.g Citrus clementina HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 90.9
Ciclev10020741m.g Citrus clementina HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 90.9
Ciclev10021087m.g Citrus clementina HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 90.9
Ciclev10021567m.g Citrus clementina HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 90.9
Ciclev10024315m.g Citrus clementina HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 90.9
Sabra19G0016400 Salix brachista HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 92.7
Sabra19G0026700 Salix brachista HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 92.7
GSVIVG01036218001 Vitis vinifera HOM05D004756 ORTHO05D005793 1.1e-20 102.4 55 90.9
Actinidia12823 Actinidia chinensis HOM05D000054 ORTHO05D005793 1.4e-20 102.1 55 90.9
Glyma.06G217200 Glycine max HOM05D004756 ORTHO05D005793 1.4e-20 102.1 55 92.7
Lsat_1_v5_gn_2_109700 Lactuca sativa HOM05D004756 ORTHO05D005793 1.4e-20 102.1 54 92.6
Lsat_1_v5_gn_5_179521 Lactuca sativa HOM05D004756 ORTHO05D005793 1.4e-20 102.1 54 92.6
ATR0665G165 Amborella trichopoda HOM05D004756 ORTHO05D005793 1.9e-20 101.7 55 90.9
ECA248G2407 Erigeron canadensis HOM05D004756 ORTHO05D005793 3.2e-20 100.9 55 90.9
Eucgr.L01375 Eucalyptus grandis HOM05D004756 ORTHO05D005793 3.2e-20 100.9 55 90.9
Lj7A536T7 Lonicera japonica HOM05D004756 ORTHO05D005793 3.2e-20 100.9 55 90.9
Rhsim06G0122800 Rhododendron simsii HOM05D004756 ORTHO05D005793 3.2e-20 100.9 55 89.1
TPR.G15315 Trifolium pratense HOM05D004756 ORTHO05D005793 3.2e-20 100.9 55 89.1
TWI56G0480 Tripterygium wilfordii HOM05D004756 ORTHO05D005793 3.2e-20 100.9 55 87.3
arahy.Tifrunner.gnm1.ann1.N732CA Arachis hypogaea HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 90.9
CDE06G0731 Ceratophyllum demersum HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 89.1
HanXRQChr01g0015131 Helianthus annuus HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 90.9
Lj7A537T48 Lonicera japonica HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 90.9
MD04G1227700 Malus domestica HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 90.9
Oeu011324.1 Olea europaea HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 90.9
Prupe.6G347300 Prunus persica HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 90.9
HPP92_018816 Vanilla planifolia HOM05D004756 ORTHO05D005793 4.2e-20 100.5 55 89.1
CDE07G1473 Ceratophyllum demersum HOM05D004756 ORTHO05D005793 5.5e-20 100.1 55 87.3
Cfa006386 Carpinus fangiana HOM05D004756 ORTHO05D005793 9.3e-20 99.4 54 90.7
AUR62024000 Chenopodium quinoa HOM05D004756 ORTHO05D005793 9.3e-20 99.4 55 89.1
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 9.3e-20 99.4 55 89.1
Eucgr.H00259 Eucalyptus grandis HOM05D004756 ORTHO05D005793 9.3e-20 99.4 55 89.1
Psat0s4043g0080 Pisum sativum HOM05D004756 ORTHO05D005793 9.3e-20 99.4 54 88.9
RcHm_v2.0_Chr3g0450151 Rosa chinensis HOM05D004756 ORTHO05D005793 9.3e-20 99.4 55 89.1
SEGI_24335 Sequoiadendron giganteum HOM05D004756 ORTHO05D005793 9.3e-20 99.4 55 87.3
Sc21g0004350 Simmondsia chinensis HOM05D004756 ORTHO05D005793 9.3e-20 99.4 55 89.1
THA.LOC104808029 Tarenaya hassleriana HOM05D004756 ORTHO05D005793 9.3e-20 99.4 55 89.1
arahy.Tifrunner.gnm1.ann1.2YXN00 Arachis hypogaea HOM05D004756 ORTHO05D005793 1.2e-19 99.0 55 89.1
Ca_02704_v3 Cicer arietinum L. HOM05D004756 ORTHO05D005793 1.2e-19 99.0 55 89.1
Lj6g0025011 Lotus japonicus HOM05D004756 ORTHO05D005793 1.2e-19 99.0 55 89.1
Medtr2g058550 Medicago truncatula HOM05D004756 ORTHO05D005793 1.2e-19 99.0 55 87.3
Oeu032125.1 Olea europaea HOM05D004756 ORTHO05D005793 1.2e-19 99.0 55 89.1
PSO170G6485 Papaver somniferum HOM05D004756 ORTHO05D005793 1.2e-19 99.0 55 85.5
PSO528G0135 Papaver somniferum HOM05D004756 ORTHO05D005793 1.2e-19 99.0 55 85.5
FAN13G2410 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.1e-19 98.2 55 87.3
Lsat_1_v5_gn_8_53341 Lactuca sativa HOM05D004756 ORTHO05D005793 2.1e-19 98.2 54 88.9
Hund00823 Selenicereus undatus HOM05D004756 ORTHO05D005793 2.1e-19 98.2 55 87.3
unitig_62.g23111 Utricularia gibba HOM05D004756 ORTHO05D005793 2.1e-19 98.2 55 89.1
Aa31LG8G10570 Aethionema arabicum HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 85.5
CANSAT54G2478 Cannabis sativa HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 87.3
ClCG06G009440 Citrullus lanatus HOM05D004756 ORTHO05D005793 2.7e-19 97.8 54 88.9
COL.COLO4_15415 Corchorus olitorius HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 87.3
Haze_04391 Corylus avellana HOM05D004756 ORTHO05D005793 2.7e-19 97.8 54 88.9
MELO3C024666.2 Cucumis melo HOM05D004756 ORTHO05D005793 2.7e-19 97.8 54 88.9
CsaV3_1G045570 Cucumis sativus L. HOM05D004756 ORTHO05D005793 2.7e-19 97.8 54 88.9
Duzib128G2034 Durio zibethinus HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 87.3
Migut.M00214 Erythranthe guttata HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 89.1
Gohir.A11G250480 Gossypium hirsutum HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 87.3
Gorai.007G279800 Gossypium raimondii HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 87.3
QL03p029131 Quercus lobata HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 87.3
SGA_v2.0_scaffold130G34203 Striga asiatica HOM05D004756 ORTHO05D005793 2.7e-19 97.8 55 89.1
Ah.15g093660 Amaranthus hybridus HOM05D004756 ORTHO05D005793 3.5e-19 97.4 55 87.3
FvH4_6g02380 Fragaria vesca HOM05D004756 ORTHO05D005793 3.5e-19 97.4 55 87.3
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.5e-19 97.4 55 87.3
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.5e-19 97.4 55 87.3
FAN05G2727 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.6e-19 97.1 55 87.3
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.6e-19 97.1 55 87.3
FAN08G1019 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.6e-19 97.1 55 87.3
FAN09G0888 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.6e-19 97.1 55 87.3
Zm00001eb205610 Zea mays HOM05D004756 ORTHO05D005793 4.6e-19 97.1 55 85.5
Atru.chr2.885 Acer truncatum HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 87.3
AL1G19180 Arabidopsis lyrata HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
AT1G08750 Arabidopsis thaliana HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
MSTRG.15061 Avicennia marina HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 89.1
BcaB03g13316 Brassica carinata HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
BcaNung06265 Brassica carinata HOM05D000200 ORTHO05D005793 6.0e-19 96.7 55 83.6
A06p05660 Brassica napus HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
A09p65770 Brassica napus HOM05D000239 ORTHO05D001037 6.0e-19 96.7 55 83.6
C05p06830 Brassica napus HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
BolC5t29441H Brassica oleracea HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
BraA06t23775Z Brassica rapa HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
BraA09t41921Z Brassica rapa HOM05D000239 ORTHO05D000484 6.0e-19 96.7 55 83.6
Carub.0001s0809 Capsella rubella HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
Thhalv10007907m.g Eutrema salsugineum HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
FAN02G1286 Fragaria x ananassa HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 87.3
Sp1g07390 Schrenkiella parvula HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 83.6
Thecc.05G277000 Theobroma cacao HOM05D004756 ORTHO05D005793 6.0e-19 96.7 55 85.5
CAN.G449.74 Capsicum annuum HOM05D004756 ORTHO05D005793 7.9e-19 96.3 54 85.2
CAN.G577.1 Capsicum annuum HOM05D004756 ORTHO05D005793 7.9e-19 96.3 54 85.2
CARHR008670 Cardamine hirsuta HOM05D004756 ORTHO05D005793 7.9e-19 96.3 54 85.2
FvH4_5g04770 Fragaria vesca HOM05D004756 ORTHO05D005793 7.9e-19 96.3 55 85.5
Glyma.20G034600 Glycine max HOM05D004756 ORTHO05D005793 7.9e-19 96.3 55 89.1
Gohir.A11G250600 Gossypium hirsutum HOM05D004756 ORTHO05D005793 7.9e-19 96.3 53 88.7
Os02g0219400 Oryza sativa ssp. japonica HOM05D004756 ORTHO05D005793 7.9e-19 96.3 55 83.6
vmacro12429 Vaccinium macrocarpon HOM05D004756 ORTHO05D005793 7.9e-19 96.3 55 85.5
FAN04G1391 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.0e-18 95.9 55 85.5
Sed0000709 Sechium edule HOM05D004756 ORTHO05D005793 1.0e-18 95.9 54 87.0
Sed0006035 Sechium edule HOM05D004756 ORTHO05D005793 1.0e-18 95.9 54 87.0
Sed0007432 Sechium edule HOM05D004756 ORTHO05D005793 1.0e-18 95.9 54 87.0
Sed0019802 Sechium edule HOM05D004756 ORTHO05D005793 1.0e-18 95.9 54 87.0
Sed0025298 Sechium edule HOM05D004756 ORTHO05D005793 1.0e-18 95.9 54 87.0
EL10Ac9g21026 Beta vulgaris HOM05D004756 ORTHO05D005793 1.3e-18 95.5 55 85.5
CSS0029039 Camellia sinensis var. sinensis HOM05D004756 ORTHO05D005793 1.3e-18 95.5 55 85.5
FAN18G1570 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.3e-18 95.5 54 87.0
Solyc10g007850.3 Solanum lycopersicum HOM05D004756 ORTHO05D005793 2.3e-18 94.7 54 83.3
Sopen10g003750 Solanum pennellii HOM05D004756 ORTHO05D005793 2.3e-18 94.7 54 83.3
PGSC0003DMG400021238 Solanum tuberosum HOM05D004756 ORTHO05D005793 2.3e-18 94.7 54 83.3
C08p49840 Brassica napus HOM05D000239 ORTHO05D000484 2.5e-17 91.3 55 80.0
SHI31377 Sapria himalayana HOM05D004756 ORTHO05D005793 4.3e-17 90.5 55 80.0
Pp3c9_23730 Physcomitrium patens HOM05D004756 ORTHO05D005793 6.2e-16 86.7 54 72.2
Mapoly0069s0027 Marchantia polymorpha HOM05D004756 ORTHO05D005793 2.4e-15 84.7 54 70.4
Mapoly0092s0030 Marchantia polymorpha HOM05D004756 ORTHO05D005793 2.4e-15 84.7 54 70.4
Actinidia11184 Actinidia chinensis HOM05D004756 ORTHO05D005793 3.4e-14 80.9 70 64.3
AagrBONN_evm.TU.Sc2ySwM_228.4219 Anthoceros agrestis HOM05D004756 ORTHO05D005793 3.4e-14 80.9 54 68.5
CBR_g39523 Chara braunii HOM05D004756 ORTHO05D005793 7.6e-14 79.7 54 70.4
SMO356G0549 Selaginella moellendorffii HOM05D004756 ORTHO05D005793 7.9e-11 69.7 44 75.0
MCO16G186 Micromonas commoda HOM05D004756 ORTHO05D005793 1.8e-10 68.6 54 59.3
PGSC0003DMG400011666 Solanum tuberosum HOM05D004756 ORTHO05D005793 2.4e-07 58.2 33 78.8
Nitab4.5_0002027g0100 Nicotiana tabacum HOM05D004756 ORTHO05D005793 1.5e-06 55.5 51 58.8
Haze_27491 Corylus avellana HOM05D004756 ORTHO05D005793 5.9e-06 53.5 47 53.2
Medtr3g449450 Medicago truncatula HOM05D004756 ORTHO05D005793 7.7e-06 53.1 30 83.3


User provided reference genes

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