Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 5.1e-191 671.0 360 100.0
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 8.9e-103 377.9 321 66.4
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.5e-102 377.1 324 65.7
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.3e-101 374.0 328 64.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 4.1e-100 369.0 323 65.0
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 5.4e-100 368.6 319 69.0
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 9.2e-100 367.9 329 64.1
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 2.3e-98 363.2 323 65.3
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.3e-98 363.2 329 63.8
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 3.0e-98 362.8 319 65.2
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.5e-97 360.5 327 65.1
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.9e-97 360.1 324 64.8
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 3.3e-97 359.4 320 64.7
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.2e-94 350.9 331 62.2
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 2.9e-93 346.3 322 62.7
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 8.3e-93 344.7 320 62.8
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 8.3e-93 344.7 322 61.2
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.4e-92 344.0 323 60.7
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 7.1e-92 341.7 322 62.7
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 7.1e-92 341.7 341 59.5
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 9.2e-92 341.3 329 61.7
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 9.2e-92 341.3 331 61.9
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.2e-91 340.9 323 64.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.2e-91 340.9 319 61.4
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 3.5e-91 339.3 330 60.0
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.7e-90 337.0 340 59.1
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 3.0e-90 336.3 319 61.1
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 5.1e-90 335.5 339 61.1
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 8.6e-90 334.7 329 60.5
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 8.6e-90 334.7 320 61.9
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 5.6e-89 332.0 322 59.9
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 5.6e-89 332.0 331 59.5
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 9.5e-89 331.3 278 67.3
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.2e-88 330.9 323 60.7
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.6e-88 330.5 320 60.3
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.8e-88 329.7 341 60.1
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 2.8e-88 329.7 318 64.5
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 3.6e-88 329.3 320 61.2
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 1.1e-87 327.8 343 57.4
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 6.8e-87 325.1 321 59.8
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 8.9e-87 324.7 332 58.4
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 8.9e-87 324.7 320 60.3
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.5e-86 323.9 343 58.3
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 2.0e-86 323.6 320 58.8
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 4.4e-86 322.4 319 59.2
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.6e-86 321.6 338 59.5
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 7.6e-86 321.6 322 59.0
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 9.9e-86 321.2 339 57.5
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 1.3e-85 320.9 340 57.4
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.9e-85 319.7 333 59.2
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.9e-85 318.9 328 59.5
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 6.4e-85 318.5 443 48.8
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 7.1e-84 315.1 323 57.9
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 9.2e-84 314.7 322 59.3
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 2.1e-83 313.5 346 55.2
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 3.5e-83 312.8 339 56.6
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 3.5e-83 312.8 338 57.4
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 4.6e-83 312.4 320 59.4
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 7.8e-83 311.6 322 57.5
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.7e-82 310.5 320 57.5
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.3e-82 310.1 338 58.0
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 3.0e-82 309.7 342 57.6
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 6.6e-82 308.5 352 54.8
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.6e-82 308.5 342 57.0
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.5e-81 307.4 346 55.5
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 3.3e-81 306.2 325 56.0
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 4.3e-81 305.8 320 59.1
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 5.6e-81 305.4 357 55.2
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.6e-81 305.4 342 56.7
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 5.6e-81 305.4 284 61.6
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 7.3e-81 305.1 344 56.1
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 7.3e-81 305.1 323 56.3
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.2e-80 304.3 346 55.2
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 3.6e-80 302.8 332 55.7
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.7e-80 302.4 327 55.4
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.1e-79 301.2 327 54.7
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 1.4e-79 300.8 327 56.6
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 4.0e-79 299.3 275 61.8
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 6.8e-79 298.5 326 56.4
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 1.5e-78 297.4 322 55.6
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 2.0e-78 297.0 325 57.5
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 2.0e-78 297.0 295 60.0
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 2.0e-78 297.0 336 55.4
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 9.9e-78 294.7 253 64.4
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 2.2e-77 293.5 337 54.3
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 2.2e-77 293.5 319 56.4
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.9e-77 293.1 325 54.5
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 2.9e-77 293.1 334 53.9
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 4.9e-77 292.4 337 54.0
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 2.4e-76 290.0 326 54.6
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.6e-75 287.3 339 54.6
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.3e-74 284.3 328 53.4
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 3.0e-74 283.1 339 54.3
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.9e-74 282.7 339 54.0
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 4.8e-72 275.8 338 52.1
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 6.2e-72 275.4 322 52.8
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 1.7e-69 267.3 336 50.9
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 2.9e-69 266.5 321 53.9
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 8.4e-69 265.0 306 53.3
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.6e-67 260.8 294 52.7
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 8.4e-61 238.4 333 46.5
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 6.2e-56 222.2 249 53.8
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 3.1e-55 219.9 239 53.6
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 1.3e-50 204.5 228 53.5
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 2.3e-50 203.8 261 52.1
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 3.3e-49 199.9 126 80.2
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 4.8e-48 196.1 199 60.3
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 2.4e-47 193.7 246 48.0
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 4.5e-46 189.5 182 57.1
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 1.8e-39 167.5 246 41.9
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 5.5e-36 156.0 181 48.1
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 9.4e-36 155.2 301 38.2
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 2.2e-32 144.1 290 36.2
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 4.5e-22 109.8 125 57.6
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 1.5e-20 104.8 88 67.0
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 1.0e-18 98.6 147 49.7
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 7.7e-14 82.4 135 38.5
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.9e-12 77.8 52 65.4
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 5.5e-12 76.3 46 76.1
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 9.4e-12 75.5 46 73.9
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 1.4e-10 71.6 176 35.8
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 8.8e-10 68.9 324 26.2
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 4.1e-07 60.1 145 27.6
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 7.0e-07 59.3 127 38.6


User provided reference genes

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