Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 5.7e-113 411.0 216 100.0
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 7.5e-89 330.9 219 78.1
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 1.1e-87 327.0 219 77.2
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 1.6e-86 323.2 218 74.8
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 7.7e-86 320.9 220 75.5
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.7e-85 319.7 219 76.3
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 1.7e-85 319.7 219 75.8
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 2.9e-85 318.9 218 74.3
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 4.2e-84 315.1 218 73.4
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 7.2e-84 314.3 219 74.0
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 9.4e-84 313.9 214 75.7
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 8.0e-83 310.8 212 75.0
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 1.0e-82 310.5 216 72.7
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 5.2e-82 308.1 214 72.0
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 5.2e-82 308.1 220 70.5
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 5.7e-81 304.7 200 75.0
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 1.7e-80 303.1 217 71.4
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 2.8e-80 302.4 216 74.1
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 4.9e-80 301.6 218 71.1
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 4.9e-80 301.6 215 71.6
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 6.3e-80 301.2 214 72.4
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 8.3e-80 300.8 216 72.7
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 8.3e-80 300.8 222 69.8
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 1.1e-79 300.4 242 67.4
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 1.1e-79 300.4 219 70.8
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 1.8e-79 299.7 218 71.1
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 3.1e-79 298.9 218 71.1
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 5.4e-79 298.1 197 75.1
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 9.2e-79 297.4 217 71.0
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 4.5e-78 295.0 199 73.9
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 5.9e-78 294.7 219 69.4
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 5.9e-78 294.7 242 64.5
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 1.0e-77 293.9 226 67.3
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 2.3e-77 292.7 224 69.2
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 5.0e-77 291.6 216 69.4
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 5.0e-77 291.6 216 69.4
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 5.0e-77 291.6 215 71.2
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 8.6e-77 290.8 216 69.0
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.5e-76 290.0 213 68.5
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 1.5e-76 290.0 219 69.4
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 3.3e-76 288.9 218 67.9
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 4.3e-76 288.5 221 68.3
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 5.6e-76 288.1 218 67.4
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 9.5e-76 287.3 222 68.9
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 9.5e-76 287.3 216 67.1
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 9.5e-76 287.3 214 68.2
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 9.5e-76 287.3 222 68.0
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 9.5e-76 287.3 216 70.4
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 1.2e-75 287.0 216 67.6
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 1.2e-75 287.0 215 67.0
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 1.6e-75 286.6 216 67.1
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 2.1e-75 286.2 220 67.7
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 3.6e-75 285.4 222 68.5
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 4.7e-75 285.0 220 68.2
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 6.1e-75 284.6 215 67.9
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 5.2e-74 281.6 213 68.5
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 1.5e-73 280.0 213 69.0
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 2.0e-73 279.6 214 65.9
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 2.6e-73 279.3 220 70.5
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 2.6e-73 279.3 214 67.8
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 7.5e-73 277.7 216 66.7
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 1.1e-71 273.9 222 66.7
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 7.0e-71 271.2 213 65.3
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 9.2e-71 270.8 202 67.8
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 8.6e-69 264.2 218 65.6
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 8.6e-69 264.2 217 60.4
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.5e-68 263.5 216 62.0
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 4.3e-68 261.9 169 74.0
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 2.1e-67 259.6 219 64.8
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 2.1e-67 259.6 213 60.1
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 4.7e-67 258.5 195 66.7
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.0e-66 257.3 167 75.4
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 2.3e-66 256.1 229 59.4
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 3.1e-66 255.8 206 65.5
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 8.9e-66 254.2 167 75.4
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 1.5e-65 253.4 183 68.3
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 2.0e-65 253.1 167 74.3
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 5.8e-65 251.5 217 63.1
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 1.9e-63 246.5 167 71.9
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 1.1e-60 237.3 179 64.8
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 1.5e-60 236.9 210 57.6
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 1.9e-60 236.5 155 76.1
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 4.0e-58 228.8 152 78.3
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 1.3e-56 223.8 160 70.6
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 8.3e-56 221.1 226 54.9
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 6.0e-54 214.9 214 55.6
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 1.6e-51 206.8 219 50.2
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 4.7e-51 205.3 155 75.5
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 1.1e-50 204.1 140 69.3
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.8e-42 176.8 143 67.1
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 2.4e-42 176.4 143 66.4
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 4.0e-42 175.6 136 63.2
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.0e-41 173.3 217 47.9
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.4e-26 124.0 95 66.3
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 8.4e-24 114.8 80 72.5
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 8.4e-24 114.8 80 72.5
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 3.3e-20 102.8 66 77.3
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 1.3e-19 100.9 210 35.7
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 1.1e-18 97.8 59 74.6
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.5e-15 86.7 78 62.8
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 7.9e-14 81.6 153 37.9
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 4.3e-12 75.9 73 42.5
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 4.8e-11 72.4 186 31.7
CDE04G2918 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 6.1e-06 55.5 43 60.5


User provided reference genes

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