Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc16.160 Carica papaya HOM05D001646 ORTHO05D001572 1.1e-107 393.3 196 100.0
Cpa.g.sc16.159 Carica papaya HOM05D001646 ORTHO05D001572 1.1e-57 227.3 151 80.1
Manes.03G193900 Manihot esculenta HOM05D001646 ORTHO05D001572 2.0e-24 116.7 163 45.4
Ciclev10004297m.g Citrus clementina HOM05D001646 ORTHO05D001572 7.1e-22 108.2 151 47.7
Sabra08G0154400 Salix brachista HOM05D001646 ORTHO05D001572 3.5e-21 105.9 168 42.9
QL06p008574 Quercus lobata HOM05D001646 ORTHO05D001572 8.7e-20 101.3 148 45.3
Potri.008G210200 Populus trichocarpa HOM05D001646 ORTHO05D001572 2.5e-19 99.8 172 41.3
Thecc.04G282900 Theobroma cacao HOM05D001646 ORTHO05D001572 4.3e-19 99.0 160 47.5
GSVIVG01017743001 Vitis vinifera HOM05D001646 ORTHO05D001572 5.7e-19 98.6 156 43.6
CiPaw.01G149800 Carya illinoinensis HOM05D001646 ORTHO05D001572 2.2e-18 96.7 153 45.1
Manes.15G013600 Manihot esculenta HOM05D001646 ORTHO05D001572 2.8e-18 96.3 168 38.7
Prupe.1G138300 Prunus persica HOM05D001646 ORTHO05D001572 2.8e-18 96.3 164 40.2
COL.COLO4_13893 Corchorus olitorius HOM05D001646 ORTHO05D001572 1.1e-17 94.4 170 43.5
CiPaw.02G084000 Carya illinoinensis HOM05D001646 ORTHO05D001572 6.9e-17 91.7 149 43.6
Sabra10G0015000 Salix brachista HOM05D001646 ORTHO05D001572 6.9e-17 91.7 174 40.8
Potri.010G023900 Populus trichocarpa HOM05D001646 ORTHO05D001572 9.0e-17 91.3 175 40.0
Dinv29772 Davidia involucrata HOM05D001646 ORTHO05D001572 2.0e-16 90.1 162 42.6
Dinv44392 Davidia involucrata HOM05D001646 ORTHO05D001572 2.0e-16 90.1 153 44.4
Haze_01226 Corylus avellana HOM05D001646 ORTHO05D001572 3.4e-16 89.4 133 47.4
Duzib151G1144 Durio zibethinus HOM05D001646 ORTHO05D001572 3.4e-16 89.4 153 46.4
TAR365G0552 Trochodendron aralioides HOM05D001646 ORTHO05D001572 2.9e-15 86.3 166 42.8
TAR633G1345 Trochodendron aralioides HOM05D001646 ORTHO05D001572 4.2e-14 82.4 168 41.7
TAR362G0622 Trochodendron aralioides HOM05D001646 ORTHO05D001572 9.4e-14 81.3 169 36.7
Dinv33022 Davidia involucrata HOM05D001646 ORTHO05D001572 3.6e-13 79.3 161 39.8
ClCG06G005240 Citrullus lanatus HOM05D001646 ORTHO05D001572 2.3e-12 76.6 160 43.8
CsaV3_3G014540 Cucumis sativus L. HOM05D001646 ORTHO05D001572 2.3e-12 76.6 151 39.1
CANSAT21G1500 Cannabis sativa HOM05D001646 ORTHO05D001572 5.1e-12 75.5 157 39.5
Lj6A673T91 Lonicera japonica HOM05D001646 ORTHO05D001572 1.1e-11 74.3 121 44.6
RcHm_v2.0_Chr4g0421961 Rosa chinensis HOM05D001646 ORTHO05D001572 2.5e-11 73.2 128 40.6
Glyma.07G248800 Glycine max HOM05D001646 ORTHO05D001572 3.3e-11 72.8 134 40.3
Sed0025970 Sechium edule HOM05D001646 ORTHO05D001572 3.3e-11 72.8 208 31.2
FAN07G1305 Fragaria x ananassa HOM05D001646 ORTHO05D001572 7.4e-11 71.6 122 41.8
CsaV3_6G017280 Cucumis sativus L. HOM05D001646 ORTHO05D001572 9.7e-11 71.2 158 40.5
FAN12G3565 Fragaria x ananassa HOM05D001646 ORTHO05D001572 9.7e-11 71.2 143 37.8
MD16G1171500 Malus domestica HOM05D001646 ORTHO05D001572 9.7e-11 71.2 159 37.7
Nn3g21399 Nelumbo nucifera HOM05D001646 ORTHO05D001572 9.7e-11 71.2 160 41.9
FvH4_4g17850 Fragaria vesca HOM05D001646 ORTHO05D001572 1.7e-10 70.5 126 41.3
FAN12G3505 Fragaria x ananassa HOM05D001646 ORTHO05D001572 1.7e-10 70.5 126 41.3
FAN17G2714 Fragaria x ananassa HOM05D001646 ORTHO05D001572 3.7e-10 69.3 127 40.9
Aqoxy2G03028 Aquilegia oxysepala HOM05D001646 ORTHO05D001572 4.8e-10 68.9 175 40.6
Sed0020393 Sechium edule HOM05D001646 ORTHO05D001572 4.8e-10 68.9 151 38.4
MELO3C021344.2 Cucumis melo HOM05D001646 ORTHO05D001572 8.2e-10 68.2 158 39.9
Dinv40306 Davidia involucrata HOM05D001646 ORTHO05D001572 8.2e-10 68.2 151 40.4
Nn043s41805 Nelumbo nucifera HOM05D001646 ORTHO05D001572 8.2e-10 68.2 150 39.3
MD13G1170000 Malus domestica HOM05D001646 ORTHO05D001572 1.1e-09 67.8 163 35.0
ClCG05G006030 Citrullus lanatus HOM05D001646 ORTHO05D001572 1.8e-09 67.0 144 37.5
TPR.G3191 Trifolium pratense HOM05D001646 ORTHO05D001572 1.8e-09 67.0 148 37.8
MELO3C006655.2 Cucumis melo HOM05D001646 ORTHO05D001572 3.1e-09 66.2 145 36.6
CANSAT78G2284 Cannabis sativa HOM05D001646 ORTHO05D001572 5.3e-09 65.5 144 34.0
Dinv30783 Davidia involucrata HOM05D001646 ORTHO05D001572 1.5e-08 63.9 159 39.6
DCAR_002463 Daucus carota HOM05D001646 ORTHO05D001572 2.0e-08 63.5 150 33.3
Sed0017245 Sechium edule HOM05D001646 ORTHO05D001572 3.4e-08 62.8 131 39.7
PSO017G2656 Papaver somniferum HOM05D001646 ORTHO05D001572 4.5e-08 62.4 90 47.8
Psat4g027600 Pisum sativum HOM05D001646 ORTHO05D001572 7.7e-08 61.6 140 37.9
Prupe.6G323200 Prunus persica HOM05D001646 ORTHO05D001572 7.7e-08 61.6 149 37.6
Glyma.17G025500 Glycine max HOM05D001646 ORTHO05D001572 1.0e-07 61.2 147 38.1
Sed0005271 Sechium edule HOM05D001646 ORTHO05D001572 1.0e-07 61.2 151 36.4
Aqoxy5G00697 Aquilegia oxysepala HOM05D001646 ORTHO05D001572 1.3e-07 60.8 152 35.5
MSTRG.24790 Avicennia marina HOM05D001646 ORTHO05D001572 1.3e-07 60.8 151 34.4
PSO210G1676 Papaver somniferum HOM05D001646 ORTHO05D001572 2.2e-07 60.1 145 36.6
Psat3g023280 Pisum sativum HOM05D001646 ORTHO05D001572 3.8e-07 59.3 177 35.6
Ciclev10024513m.g Citrus clementina HOM05D001646 ORTHO05D001572 5.0e-07 58.9 161 35.4
PSO675G3817 Papaver somniferum HOM05D001646 ORTHO05D001572 5.0e-07 58.9 92 46.7
PSO832G3540 Papaver somniferum HOM05D001646 ORTHO05D001572 8.5e-07 58.2 145 35.9
VMungo1215G1666 Vigna mungo HOM05D001646 ORTHO05D001572 8.5e-07 58.2 92 44.6
Phvul.003G104100 Phaseolus vulgaris HOM05D001646 ORTHO05D001572 1.1e-06 57.8 135 40.7
vmacro08130 Vaccinium macrocarpon HOM05D001646 ORTHO05D001572 1.4e-06 57.4 137 40.1
Actinidia01471 Actinidia chinensis HOM05D001646 ORTHO05D001572 1.9e-06 57.0 91 42.9
Oeu037754.1 Olea europaea HOM05D001646 ORTHO05D001572 1.9e-06 57.0 139 37.4
RcHm_v2.0_Chr3g0455281 Rosa chinensis HOM05D001646 ORTHO05D001572 2.5e-06 56.6 139 35.3
PSO210G6320 Papaver somniferum HOM05D001646 ORTHO05D001572 3.2e-06 56.2 103 41.7
Thecc.01G294300 Theobroma cacao HOM05D001646 ORTHO05D001572 3.2e-06 56.2 137 37.2
Actinidia40267 Actinidia chinensis HOM05D001646 ORTHO05D001572 4.2e-06 55.8 146 37.0
Ca_14439_v3 Cicer arietinum L. HOM05D001646 ORTHO05D001572 4.2e-06 55.8 139 36.7
MBI18_g26756_MAGBIO Magnolia biondii HOM05D001646 ORTHO05D001572 5.5e-06 55.5 102 39.2
ATR0706G063 Amborella trichopoda HOM05D001646 ORTHO05D001572 7.2e-06 55.1 123 35.0
Cpa.g.sc48.74 Carica papaya HOM05D001646 ORTHO05D001572 7.2e-06 55.1 161 34.8
Eucgr.H03895 Eucalyptus grandis HOM05D001646 ORTHO05D001572 7.2e-06 55.1 156 36.5
MBI19_g30835_MAGBIO Magnolia biondii HOM05D001646 ORTHO05D001572 7.2e-06 55.1 127 37.0
PSO832G1994 Papaver somniferum HOM05D001646 ORTHO05D001572 7.2e-06 55.1 103 41.7
Atru.chr4.2812 Acer truncatum HOM05D001646 ORTHO05D001572 9.4e-06 54.7 108 40.7


User provided reference genes

Program Settings