Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc16.158 Carica papaya HOM05D001646 ORTHO05D001572 3.1e-33 144.4 68 100.0
Duzib151G1144 Durio zibethinus HOM05D001646 ORTHO05D001572 1.0e-15 86.3 68 58.8
Dinv29772 Davidia involucrata HOM05D001646 ORTHO05D001572 5.0e-15 84.0 68 57.4
Dinv40306 Davidia involucrata HOM05D001646 ORTHO05D001572 1.1e-14 82.8 67 55.2
Dinv44392 Davidia involucrata HOM05D001646 ORTHO05D001572 1.1e-14 82.8 68 58.8
CSS0017518 Camellia sinensis var. sinensis HOM05D001646 ORTHO05D001572 1.9e-14 82.0 68 55.9
Actinidia40267 Actinidia chinensis HOM05D001646 ORTHO05D001572 9.4e-14 79.7 58 63.8
Thecc.04G282900 Theobroma cacao HOM05D001646 ORTHO05D001572 3.6e-13 77.8 68 54.4
COL.COLO4_13893 Corchorus olitorius HOM05D001646 ORTHO05D001572 6.1e-13 77.0 68 52.9
TAR362G0622 Trochodendron aralioides HOM05D001646 ORTHO05D001572 8.0e-13 76.6 68 52.9
TAR365G0552 Trochodendron aralioides HOM05D001646 ORTHO05D001572 1.0e-12 76.3 67 56.7
Aqoxy5G00697 Aquilegia oxysepala HOM05D001646 ORTHO05D001572 1.8e-12 75.5 71 52.1
Rhsim04G0220200 Rhododendron simsii HOM05D001646 ORTHO05D001572 1.8e-12 75.5 65 49.2
FAN07G1305 Fragaria x ananassa HOM05D001646 ORTHO05D001572 8.8e-12 73.2 68 48.5
FAN22G1205 Fragaria x ananassa HOM05D001646 ORTHO05D001572 8.8e-12 73.2 68 48.5
FvH4_4g17850 Fragaria vesca HOM05D001646 ORTHO05D001572 1.2e-11 72.8 68 48.5
FAN12G3505 Fragaria x ananassa HOM05D001646 ORTHO05D001572 1.2e-11 72.8 68 48.5
FAN12G3565 Fragaria x ananassa HOM05D001646 ORTHO05D001572 1.2e-11 72.8 68 48.5
Nn4g25923 Nelumbo nucifera HOM05D001646 ORTHO05D001572 1.5e-11 72.4 68 51.5
FAN17G2714 Fragaria x ananassa HOM05D001646 ORTHO05D001572 2.0e-11 72.0 68 48.5
QL06p008574 Quercus lobata HOM05D001646 ORTHO05D001572 4.4e-11 70.9 65 50.8
TAR633G1345 Trochodendron aralioides HOM05D001646 ORTHO05D001572 4.4e-11 70.9 69 53.6
GSVIVG01017743001 Vitis vinifera HOM05D001646 ORTHO05D001572 4.4e-11 70.9 68 47.1
Prupe.1G138300 Prunus persica HOM05D001646 ORTHO05D001572 5.7e-11 70.5 67 49.3
CSS0027963 Camellia sinensis var. sinensis HOM05D001646 ORTHO05D001572 7.5e-11 70.1 68 45.6
Dinv30782 Davidia involucrata HOM05D001646 ORTHO05D001572 7.5e-11 70.1 68 47.1
MBI19_g30835_MAGBIO Magnolia biondii HOM05D001646 ORTHO05D001572 7.5e-11 70.1 57 57.9
Actinidia00037 Actinidia chinensis HOM05D001646 ORTHO05D001572 9.8e-11 69.7 62 50.0
Actinidia14309 Actinidia chinensis HOM05D001646 ORTHO05D001572 9.8e-11 69.7 59 54.2
PGR004G1121 Punica granatum HOM05D001646 ORTHO05D001572 1.3e-10 69.3 57 56.1
CSS0045526 Camellia sinensis var. sinensis HOM05D001646 ORTHO05D001572 2.2e-10 68.6 68 44.1
CiPaw.02G084000 Carya illinoinensis HOM05D001646 ORTHO05D001572 2.8e-10 68.2 64 54.7
vmacro08130 Vaccinium macrocarpon HOM05D001646 ORTHO05D001572 3.7e-10 67.8 57 49.1
Lj6A673T91 Lonicera japonica HOM05D001646 ORTHO05D001572 6.3e-10 67.0 69 50.7
Hma1.2p1_1334F.1_g276290 Hydrangea macrophylla HOM05D001646 ORTHO05D001572 8.3e-10 66.6 59 49.2
GSVIVG01031092001 Vitis vinifera HOM05D001646 ORTHO05D001572 8.3e-10 66.6 68 50.0
Manes.15G013600 Manihot esculenta HOM05D001646 ORTHO05D001572 1.1e-09 66.2 68 48.5
vmacro15242 Vaccinium macrocarpon HOM05D001646 ORTHO05D001572 1.4e-09 65.9 58 50.0
Aqoxy2G03028 Aquilegia oxysepala HOM05D001646 ORTHO05D001572 2.4e-09 65.1 69 49.3
MD12G1216900 Malus domestica HOM05D001646 ORTHO05D001572 2.4e-09 65.1 65 47.7
Sabra10G0015000 Salix brachista HOM05D001646 ORTHO05D001572 2.4e-09 65.1 68 45.6
AUR62000796 Chenopodium quinoa HOM05D001646 ORTHO05D001572 3.1e-09 64.7 65 50.8
AUR62005172 Chenopodium quinoa HOM05D001646 ORTHO05D001572 4.1e-09 64.3 65 50.8
Potri.008G210200 Populus trichocarpa HOM05D001646 ORTHO05D001572 4.1e-09 64.3 56 51.8
Duzib177G0615 Durio zibethinus HOM05D001646 ORTHO05D001572 5.4e-09 63.9 68 44.1
Glyma.07G248800 Glycine max HOM05D001646 ORTHO05D001572 5.4e-09 63.9 65 49.2
Lj3C815T6 Lonicera japonica HOM05D001646 ORTHO05D001572 5.4e-09 63.9 68 45.6
Potri.010G023900 Populus trichocarpa HOM05D001646 ORTHO05D001572 5.4e-09 63.9 68 42.6
VMungo1215G1666 Vigna mungo HOM05D001646 ORTHO05D001572 5.4e-09 63.9 65 46.2
Nn3g21399 Nelumbo nucifera HOM05D001646 ORTHO05D001572 7.0e-09 63.5 58 51.7
Oeu037754.1 Olea europaea HOM05D001646 ORTHO05D001572 7.0e-09 63.5 67 41.8
Rhsim02G0009900 Rhododendron simsii HOM05D001646 ORTHO05D001572 7.0e-09 63.5 57 50.9
Atru.chr4.2811 Acer truncatum HOM05D001646 ORTHO05D001572 9.1e-09 63.2 58 48.3
Haze_01226 Corylus avellana HOM05D001646 ORTHO05D001572 9.1e-09 63.2 68 50.0
Glyma.17G025500 Glycine max HOM05D001646 ORTHO05D001572 9.1e-09 63.2 64 48.4
MD16G1171500 Malus domestica HOM05D001646 ORTHO05D001572 9.1e-09 63.2 68 45.6
VMungo0540G0915 Vigna mungo HOM05D001646 ORTHO05D001572 9.1e-09 63.2 65 50.8
COL.COLO4_10489 Corchorus olitorius HOM05D001646 ORTHO05D001572 1.2e-08 62.8 68 42.6
RcHm_v2.0_Chr4g0421961 Rosa chinensis HOM05D001646 ORTHO05D001572 1.2e-08 62.8 68 44.1
Rhsim02G0011000 Rhododendron simsii HOM05D001646 ORTHO05D001572 2.0e-08 62.0 57 47.4
ClCG05G006030 Citrullus lanatus HOM05D001646 ORTHO05D001572 2.7e-08 61.6 65 44.6
Ciclev10004297m.g Citrus clementina HOM05D001646 ORTHO05D001572 3.5e-08 61.2 58 46.6
Eucgr.H03895 Eucalyptus grandis HOM05D001646 ORTHO05D001572 3.5e-08 61.2 68 42.6
QL03p012815 Quercus lobata HOM05D001646 ORTHO05D001572 3.5e-08 61.2 68 44.1
Sabra08G0154400 Salix brachista HOM05D001646 ORTHO05D001572 3.5e-08 61.2 56 50.0
arahy.Tifrunner.gnm1.ann1.LLHC6G Arachis hypogaea HOM05D001646 ORTHO05D001572 4.5e-08 60.8 65 46.2
arahy.Tifrunner.gnm1.ann1.N634E9 Arachis hypogaea HOM05D001646 ORTHO05D001572 4.5e-08 60.8 65 46.2
EL10Ac4g09394 Beta vulgaris HOM05D001646 ORTHO05D001572 1.0e-07 59.7 68 47.1
Prupe.6G323200 Prunus persica HOM05D001646 ORTHO05D001572 1.0e-07 59.7 68 42.6
CiPaw.01G149800 Carya illinoinensis HOM05D001646 ORTHO05D001572 1.3e-07 59.3 69 43.5
CiPaw.07G019700 Carya illinoinensis HOM05D001646 ORTHO05D001572 1.3e-07 59.3 56 48.2
Gohir.A13G108400 Gossypium hirsutum HOM05D001646 ORTHO05D001572 1.7e-07 58.9 68 39.7
Hund07084 Selenicereus undatus HOM05D001646 ORTHO05D001572 1.7e-07 58.9 68 42.6
MSTRG.24790 Avicennia marina HOM05D001646 ORTHO05D001572 2.3e-07 58.5 84 36.9
MELO3C021344.2 Cucumis melo HOM05D001646 ORTHO05D001572 2.3e-07 58.5 59 45.8
Gohir.D13G111300 Gossypium hirsutum HOM05D001646 ORTHO05D001572 2.3e-07 58.5 68 38.2
Gorai.013G124900 Gossypium raimondii HOM05D001646 ORTHO05D001572 2.3e-07 58.5 68 38.2
RhsimUnG0064400 Rhododendron simsii HOM05D001646 ORTHO05D001572 2.3e-07 58.5 68 42.6
RhsimUnG0135200 Rhododendron simsii HOM05D001646 ORTHO05D001572 2.3e-07 58.5 68 42.6
Gohir.D08G226300 Gossypium hirsutum HOM05D001646 ORTHO05D001572 2.9e-07 58.2 54 44.4
Gorai.004G240300 Gossypium raimondii HOM05D001646 ORTHO05D001572 2.9e-07 58.2 54 44.4
Oeu058951.1 Olea europaea HOM05D001646 ORTHO05D001572 2.9e-07 58.2 50 52.0
TWI12G1306 Tripterygium wilfordii HOM05D001646 ORTHO05D001572 2.9e-07 58.2 68 42.6
Ciclev10003991m.g Citrus clementina HOM05D001646 ORTHO05D001572 3.8e-07 57.8 68 41.2
MD13G1170000 Malus domestica HOM05D001646 ORTHO05D001572 5.0e-07 57.4 68 38.2
Manes.03G193900 Manihot esculenta HOM05D001646 ORTHO05D001572 5.0e-07 57.4 63 42.9
TWI56G0691 Tripterygium wilfordii HOM05D001646 ORTHO05D001572 5.0e-07 57.4 58 46.6
Oeu063346.1 Olea europaea HOM05D001646 ORTHO05D001572 8.6e-07 56.6 68 41.2
Thecc.05G310700 Theobroma cacao HOM05D001646 ORTHO05D001572 8.6e-07 56.6 68 39.7
PGR031G3925 Punica granatum HOM05D001646 ORTHO05D001572 1.1e-06 56.2 58 48.3
Gohir.A08G209300 Gossypium hirsutum HOM05D001646 ORTHO05D001572 1.5e-06 55.8 54 42.6
PSO302G0190 Papaver somniferum HOM05D001646 ORTHO05D001572 1.5e-06 55.8 61 50.8
MELO3C006655.2 Cucumis melo HOM05D001646 ORTHO05D001572 1.9e-06 55.5 65 41.5
PSO170G4287 Papaver somniferum HOM05D001646 ORTHO05D001572 1.9e-06 55.5 61 50.8
ClCG06G005240 Citrullus lanatus HOM05D001646 ORTHO05D001572 2.5e-06 55.1 59 45.8
Haze_04166 Corylus avellana HOM05D001646 ORTHO05D001572 2.5e-06 55.1 68 42.6
RcHm_v2.0_Chr4g0421731 Rosa chinensis HOM05D001646 ORTHO05D001572 2.5e-06 55.1 57 45.6
Sed0017245 Sechium edule HOM05D001646 ORTHO05D001572 2.5e-06 55.1 59 44.1
TWI53G1276 Tripterygium wilfordii HOM05D001646 ORTHO05D001572 2.5e-06 55.1 68 42.6
FvH4_4g17780 Fragaria vesca HOM05D001646 ORTHO05D001572 3.3e-06 54.7 60 43.3
Lj1g0006309 Lotus japonicus HOM05D001646 ORTHO05D001572 3.3e-06 54.7 43 60.5
Lj1g0023339 Lotus japonicus HOM05D001646 ORTHO05D001572 3.3e-06 54.7 43 60.5
Ciclev10024513m.g Citrus clementina HOM05D001646 ORTHO05D001572 4.2e-06 54.3 67 41.8
Dinv33022 Davidia involucrata HOM05D001646 ORTHO05D001572 4.2e-06 54.3 67 46.3
Phvul.003G104100 Phaseolus vulgaris HOM05D001646 ORTHO05D001572 4.2e-06 54.3 53 37.7
CsaV3_6G017280 Cucumis sativus L. HOM05D001646 ORTHO05D001572 5.5e-06 53.9 59 44.1
Manes.09G168900 Manihot esculenta HOM05D001646 ORTHO05D001572 5.5e-06 53.9 68 39.7
PSO210G3988 Papaver somniferum HOM05D001646 ORTHO05D001572 5.5e-06 53.9 61 49.2
PGSC0003DMG400022661 Solanum tuberosum HOM05D001646 ORTHO05D001572 5.5e-06 53.9 68 39.7
MBI18_g26756_MAGBIO Magnolia biondii HOM05D001646 ORTHO05D001572 7.2e-06 53.5 59 49.2
Sopen01g028810 Solanum pennellii HOM05D001646 ORTHO05D001572 7.2e-06 53.5 68 39.7
Actinidia09162 Actinidia chinensis HOM05D001646 ORTHO05D001572 9.5e-06 53.1 51 51.0
CDE12G0298 Ceratophyllum demersum HOM05D001646 ORTHO05D001572 9.5e-06 53.1 40 50.0
Sed0025970 Sechium edule HOM05D001646 ORTHO05D001572 9.5e-06 53.1 65 40.0


User provided reference genes

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