Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1597.3 Carica papaya HOM05D000002 ORTHO05D000047 7.7e-40 166.8 89 100.0
SHI01819 Sapria himalayana HOM05D000002 ORTHO05D000047 8.9e-12 73.6 58 58.6
SHI22594 Sapria himalayana HOM05D000002 ORTHO05D000047 4.4e-11 71.2 76 48.7
Nn1g04988 Nelumbo nucifera HOM05D000002 ORTHO05D000047 8.3e-10 67.0 62 50.0
SHI01914 Sapria himalayana HOM05D000002 ORTHO05D000047 8.3e-10 67.0 75 45.3
Manes.01G043450 Manihot esculenta HOM05D000002 ORTHO05D000047 7.0e-09 63.9 74 41.9
Manes.03G091160 Manihot esculenta HOM05D000002 ORTHO05D000047 1.6e-08 62.8 84 44.0
Manes.09G140601 Manihot esculenta HOM05D000002 ORTHO05D000047 4.5e-08 61.2 71 38.0
Manes.18G031966 Manihot esculenta HOM05D000002 ORTHO05D000047 4.5e-08 61.2 84 41.7
Hma1.2p1_1412F.1_g281790 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-07 59.7 60 46.7
Cpa.g.sc56.37 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-07 59.3 71 42.3
Rhsim05G0175500 Rhododendron simsii HOM05D000244 ORTHO05D000047 1.7e-07 59.3 78 41.0
AUR62013584 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.9e-07 58.5 89 36.0
Hma1.2p1_2225F.1_g317480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-07 58.2 60 45.0
Rhsim01G0108500 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.9e-07 58.2 55 45.5
Rhsim02G0191000 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.9e-07 58.2 55 45.5
Hma1.2p1_0760F.1_g214100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.0e-07 57.8 60 43.3
Hma1.2p1_0945F.1_g240080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.0e-07 57.8 60 46.7
CSS0027184 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.6e-07 57.4 55 49.1
Rhsim07G0258800 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.6e-07 57.4 58 48.3
Rhsim04G0056500 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.6e-07 57.0 60 46.7
Atru.chr2.1706 Acer truncatum HOM05D000002 ORTHO05D000047 1.1e-06 56.6 82 37.8
CSS0025419 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 56.6 55 49.1
Hma1.2p1_0578F.1_g182525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-06 56.6 54 46.3
ECA233G3007 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 56.2 74 45.9
Hma1.2p1_1117F.1_g259070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-06 56.2 52 50.0
Manes.04G063678 Manihot esculenta HOM05D000002 ORTHO05D000047 1.5e-06 56.2 78 37.2
Hma1.2p1_0570F.1_g180540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-06 55.8 52 48.1
Manes.14G152301 Manihot esculenta HOM05D000002 ORTHO05D000001 1.9e-06 55.8 60 43.3
Sabra01G0086600 Salix brachista HOM05D000866 ORTHO05D000673 1.9e-06 55.8 56 46.4
Sabra11G0009100 Salix brachista HOM05D000004 ORTHO05D012114 1.9e-06 55.8 56 46.4
Sopen04g027320 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 55.8 72 41.7
AUR62028820 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 36.6
Manes.13G069751 Manihot esculenta HOM05D000002 ORTHO05D000047 2.5e-06 55.5 56 46.4
Manes.S095211 Manihot esculenta HOM05D000002 ORTHO05D000047 2.5e-06 55.5 56 46.4
Sopen04g013350 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
Manes.02G220721 Manihot esculenta HOM05D000002 ORTHO05D000047 3.3e-06 55.1 56 46.4
Manes.07G072514 Manihot esculenta HOM05D000002 ORTHO05D000047 3.3e-06 55.1 76 42.1
Manes.18G130533 Manihot esculenta HOM05D000002 ORTHO05D000047 3.3e-06 55.1 86 34.9
Rhsim10G0073900 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.3e-06 55.1 78 39.7
Rhsim11G0163200 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.3e-06 55.1 55 43.6
Sed0011912 Sechium edule HOM05D000002 ORTHO05D000047 3.3e-06 55.1 54 40.7
Sopen01g031330 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.1 74 43.2
Sopen05g030140 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.1 72 41.7
CSS0010407 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.3e-06 54.7 55 45.5
Hma1.2p1_1103F.1_g257290 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-06 54.7 77 40.3
Manes.08G099611 Manihot esculenta HOM05D000002 ORTHO05D000047 4.3e-06 54.7 71 39.4
Manes.10G147201 Manihot esculenta HOM05D000002 ORTHO05D000047 4.3e-06 54.7 64 42.2
Sabra16G0264600 Salix brachista HOM05D000002 ORTHO05D000047 4.3e-06 54.7 56 44.6
Thecc.09G280000 Theobroma cacao HOM05D000002 ORTHO05D000047 4.3e-06 54.7 56 42.9
Cpa.g.sc1.228 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-06 54.3 64 46.9
FvH4_6g21292 Fragaria vesca HOM05D000002 ORTHO05D000047 5.6e-06 54.3 76 36.8
Rhsim07G0134800 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.6e-06 54.3 70 38.6
Sopen10g022730 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-06 54.3 53 49.1
Sopen02g010970 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-06 53.9 70 35.7
Sopen05g015630 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-06 53.9 72 40.3
Sopen06g033740 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-06 53.9 72 41.7
Sopen07g025030 Solanum pennellii HOM05D000002 ORTHO05D000047 7.3e-06 53.9 74 41.9
Thecc.06G106100 Theobroma cacao HOM05D000002 ORTHO05D000047 7.3e-06 53.9 63 36.5
CSS0018273 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.5e-06 53.5 55 45.5
Cpa.g.c30627.1 Carica papaya HOM05D012486 ORTHO05D013833 9.5e-06 53.5 79 32.9
ECA247G0392 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-06 53.5 76 40.8
Hma1.2p1_0222F.1_g093830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.5e-06 53.5 57 42.1
Manes.18G122701 Manihot esculenta HOM05D000002 ORTHO05D000047 9.5e-06 53.5 53 39.6
Potri.001G150101 Populus trichocarpa HOM05D000002 ORTHO05D000047 9.5e-06 53.5 59 44.1
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 9.5e-06 53.5 73 37.0
Sopen03g007710 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-06 53.5 72 41.7
Sopen08g023860 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-06 53.5 60 45.0
THA.LOC104819061 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 9.5e-06 53.5 55 49.1
THA.LOC104823067 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 9.5e-06 53.5 55 49.1


User provided reference genes

Program Settings