Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc159.22 Carica papaya HOM05D003157 ORTHO05D004447 6.4e-51 203.8 100 100.0
PGSC0003DMG400007563 Solanum tuberosum HOM05D003157 ORTHO05D004447 1.5e-15 86.3 85 50.6
Oeu023452.2 Olea europaea HOM05D003157 ORTHO05D004447 2.4e-13 79.0 90 45.6
Sed0026079 Sechium edule HOM05D003157 ORTHO05D004447 5.3e-13 77.8 75 49.3
SGA_v2.0_scaffold7G04161 Striga asiatica HOM05D003157 ORTHO05D004447 5.8e-12 74.3 74 51.4
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 4.9e-11 71.2 91 46.2
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 4.9e-11 71.2 91 46.2
BcaC09g50840 Brassica carinata HOM05D003157 ORTHO05D004447 4.9e-11 71.2 91 46.2
C01p20020 Brassica napus HOM05D003157 ORTHO05D004447 4.9e-11 71.2 91 46.2
BolC1t01929H Brassica oleracea HOM05D003157 ORTHO05D004447 4.9e-11 71.2 91 46.2
Carub.0007s1637 Capsella rubella HOM05D003157 ORTHO05D004447 4.9e-11 71.2 91 46.2
CARHR232070 Cardamine hirsuta HOM05D003157 ORTHO05D004447 4.9e-11 71.2 91 46.2
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 1.1e-10 70.1 91 45.1
BraA01t01537Z Brassica rapa HOM05D003157 ORTHO05D004447 1.1e-10 70.1 91 45.1
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.4e-10 69.7 91 46.2
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 1.9e-10 69.3 91 45.1
BraA08t34089Z Brassica rapa HOM05D003157 ORTHO05D004447 1.9e-10 69.3 91 45.1
BolC8t48585H Brassica oleracea HOM05D003157 ORTHO05D004447 5.5e-10 67.8 95 43.2
Ah.11g051160 Amaranthus hybridus HOM05D003157 ORTHO05D004447 7.1e-10 67.4 93 43.0
Sp7g22680 Schrenkiella parvula HOM05D003157 ORTHO05D004447 7.1e-10 67.4 91 41.8
A03p55470 Brassica napus HOM05D003157 ORTHO05D004447 9.3e-10 67.0 91 44.0
BraA03t14620Z Brassica rapa HOM05D003157 ORTHO05D004447 9.3e-10 67.0 91 44.0
Cpa.g.sc159.27 Carica papaya HOM05D003157 ORTHO05D004447 9.3e-10 67.0 77 51.9
Dinv20600 Davidia involucrata HOM05D003157 ORTHO05D004447 1.2e-09 66.6 71 46.5
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 4.6e-09 64.7 131 35.1
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 4.6e-09 64.7 93 41.9
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 7.9e-09 63.9 91 44.0
BolC7t45866H Brassica oleracea HOM05D003157 ORTHO05D004447 7.9e-09 63.9 91 44.0
HPP92_006279 Vanilla planifolia HOM05D003157 ORTHO05D004447 7.9e-09 63.9 54 51.9
BcaC07g38161 Brassica carinata HOM05D003157 ORTHO05D004447 1.0e-08 63.5 91 41.8
Haze_07584 Corylus avellana HOM05D003157 ORTHO05D004447 1.0e-08 63.5 88 44.3
BcaC06g32868 Brassica carinata HOM05D003157 ORTHO05D004447 1.3e-08 63.2 91 42.9
Ca_03503_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 1.8e-08 62.8 35 80.0
Cfa019214 Carpinus fangiana HOM05D003157 ORTHO05D004447 3.9e-08 61.6 85 47.1
THA.LOC104815519 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 5.1e-08 61.2 77 49.4
THA.LOC104825177 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 5.1e-08 61.2 77 49.4
vmacro19300 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 6.7e-08 60.8 90 38.9
Rhsim12G0167900 Rhododendron simsii HOM05D003157 ORTHO05D004447 1.1e-07 60.1 86 43.0
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 2.5e-07 58.9 88 39.8
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 2.5e-07 58.9 101 36.6
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 3.3e-07 58.5 61 45.9
Sabra12G0061600 Salix brachista HOM05D003157 ORTHO05D004447 3.3e-07 58.5 93 38.7
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 4.3e-07 58.2 88 40.9
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 4.3e-07 58.2 76 44.7
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 4.3e-07 58.2 93 39.8
vmacro16645 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 4.3e-07 58.2 91 39.6
Aa31LG4G9790 Aethionema arabicum HOM05D003157 ORTHO05D004447 5.7e-07 57.8 91 40.7
SMO132G0003 Selaginella moellendorffii HOM05D003157 ORTHO05D004447 7.4e-07 57.4 97 34.0
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 1.3e-06 56.6 92 39.1
Eucgr.K02800 Eucalyptus grandis HOM05D003157 ORTHO05D004447 2.1e-06 55.8 88 40.9
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 2.1e-06 55.8 76 43.4
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 2.8e-06 55.5 88 38.6
Sabra15G0107200 Salix brachista HOM05D003157 ORTHO05D004447 3.7e-06 55.1 93 38.7
Ca_14277_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 8.2e-06 53.9 75 41.3
ClCG01G013500 Citrullus lanatus HOM05D003157 ORTHO05D004447 8.2e-06 53.9 87 37.9
TAR371G0612 Trochodendron aralioides HOM05D003157 ORTHO05D004447 8.2e-06 53.9 94 35.1


User provided reference genes

Program Settings