Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 3.2e-62 241.5 116 100.0
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 7.4e-27 124.0 125 56.0
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 2.3e-20 102.4 114 48.2
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 6.8e-20 100.9 122 47.5
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 3.4e-19 98.6 116 48.3
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 4.4e-19 98.2 114 46.5
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 5.7e-19 97.8 115 47.8
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 5.7e-19 97.8 116 45.7
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 1.7e-18 96.3 120 45.8
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 2.2e-18 95.9 118 46.6
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 4.8e-18 94.7 128 46.1
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 5.3e-17 91.3 118 47.5
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 9.1e-17 90.5 120 43.3
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 1.3e-15 86.7 127 42.5
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 4.2e-14 81.6 110 35.5
Ciclev10022809m.g Citrus clementina HOM05D008921 ORTHO05D010506 2.1e-13 79.3 117 44.4
Gohir.A03G057050 Gossypium hirsutum HOM05D008921 ORTHO05D010506 2.7e-13 79.0 109 41.3
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 2.3e-12 75.9 102 39.2
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 3.0e-12 75.5 109 41.3
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 4.0e-12 75.1 116 40.5
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 1.2e-11 73.6 126 37.3
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 2.0e-11 72.8 109 35.8
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 5.7e-11 71.2 114 37.7
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 9.8e-11 70.5 109 40.4
Potri.012G085901 Populus trichocarpa HOM05D008921 ORTHO05D010506 1.3e-10 70.1 110 37.3
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.2e-10 69.3 116 38.8
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 2.2e-10 69.3 108 38.9
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.8e-10 68.9 116 38.8
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 6.3e-10 67.8 125 32.0
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 8.3e-10 67.4 118 35.6
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 8.3e-10 67.4 118 35.6
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 8.3e-10 67.4 112 37.5
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.4e-09 66.6 123 35.8
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.8e-09 66.2 123 35.0
CAN.G338.33 Capsicum annuum HOM05D012681 ORTHO05D010506 2.7e-08 62.4 112 37.5
Eucgr.K02796 Eucalyptus grandis HOM05D042355 ORTHO05D010506 2.7e-08 62.4 112 37.5
Nitab4.5_0001793g0030 Nicotiana tabacum HOM05D016190 ORTHO05D017486 2.7e-08 62.4 128 35.9
Eucgr.K02790 Eucalyptus grandis HOM05D042355 ORTHO05D010506 3.5e-08 62.0 112 36.6
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 3.5e-08 62.0 103 39.8
Nitab4.5_0010452g0020 Nicotiana tabacum HOM05D016190 ORTHO05D017486 1.3e-07 60.1 128 35.9
Migut.D02003 Erythranthe guttata HOM05D024513 ORTHO05D010506 3.3e-06 55.5 108 35.2
Eucgr.K02789 Eucalyptus grandis HOM05D042355 ORTHO05D010506 4.2e-06 55.1 113 35.4


User provided reference genes

Program Settings